BLASTX nr result

ID: Ophiopogon22_contig00007468 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00007468
         (1495 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU74568.1| hypothetical protein MA16_Dca003771 [Dendrobium c...    49   4e-10
gb|PKU66219.1| hypothetical protein MA16_Dca009593 [Dendrobium c...    44   2e-07
gb|PKU60168.1| hypothetical protein MA16_Dca028837 [Dendrobium c...    44   9e-07

>gb|PKU74568.1| hypothetical protein MA16_Dca003771 [Dendrobium catenatum]
          Length = 252

 Score = 48.9 bits (115), Expect(2) = 4e-10
 Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
 Frame = -2

Query: 1491 FKVGDCDKLHALKQDPSRCTKLM-----IMHIF*TFGVSPIFNIEDLVAYKGLDFNLSNP 1327
            F  G   KLHA    P +  K +     I+ +   F ++P FNIEDLVAY+G DFN  NP
Sbjct: 64   FPPGTVKKLHAKSAGPFKILKKINDNAYIVDLPADFNINPSFNIEDLVAYEGPDFNPQNP 123

Query: 1326 LLVEP 1312
            L  +P
Sbjct: 124  LSKQP 128



 Score = 45.8 bits (107), Expect(2) = 4e-10
 Identities = 24/47 (51%), Positives = 28/47 (59%)
 Frame = -1

Query: 1195 DGRTRRYLIHWKGKPASDDN*XXXXXXXXXXXDALKRYESNRDTYST 1055
            +G  RRYLI WKGKP S+D             DAL+ YES RD+YST
Sbjct: 167  EGGRRRYLIRWKGKPESEDTWLDREELQQIDPDALEIYESARDSYST 213


>gb|PKU66219.1| hypothetical protein MA16_Dca009593 [Dendrobium catenatum]
          Length = 132

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 22/56 (39%), Positives = 30/56 (53%)
 Frame = -1

Query: 1195 DGRTRRYLIHWKGKPASDDN*XXXXXXXXXXXDALKRYESNRDTYSTGLSSPTRGE 1028
            DG   RYL+ W+GKP ++D             + L+ YES++D YSTG S    GE
Sbjct: 67   DGGRHRYLVRWRGKPETEDTWLERDEIQRLDPNLLELYESSQDPYSTGSSFLPPGE 122



 Score = 41.6 bits (96), Expect(2) = 2e-07
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = -2

Query: 1395 VSPIFNIEDLVAYKGLDFNLSNPLLVEP 1312
            ++P FNIEDLVA+ G DFN  NPL +EP
Sbjct: 1    MNPTFNIEDLVAFDGPDFNPENPLNIEP 28


>gb|PKU60168.1| hypothetical protein MA16_Dca028837 [Dendrobium catenatum]
          Length = 149

 Score = 44.3 bits (103), Expect(2) = 9e-07
 Identities = 23/56 (41%), Positives = 30/56 (53%)
 Frame = -1

Query: 1195 DGRTRRYLIHWKGKPASDDN*XXXXXXXXXXXDALKRYESNRDTYSTGLSSPTRGE 1028
            DG   RYL+ W+GKP ++D             D L+ YES++D YSTG S    GE
Sbjct: 67   DGGRHRYLVRWRGKPETEDTWLERDEIQRLDPDILELYESSQDPYSTGSSFLPPGE 122



 Score = 39.3 bits (90), Expect(2) = 9e-07
 Identities = 17/28 (60%), Positives = 21/28 (75%)
 Frame = -2

Query: 1395 VSPIFNIEDLVAYKGLDFNLSNPLLVEP 1312
            ++P FNIEDLV + G DFN  NPL +EP
Sbjct: 1    MNPTFNIEDLVVFDGPDFNPKNPLNLEP 28


Top