BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00007267
         (847 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020260299.1| polyadenylation and cleavage factor homolog ...   115   3e-25

>ref|XP_020260299.1| polyadenylation and cleavage factor homolog 4 [Asparagus officinalis]
 gb|ONK71227.1| uncharacterized protein A4U43_C04F6190 [Asparagus officinalis]
          Length = 1063

 Score =  115 bits (289), Expect = 3e-25
 Identities = 99/283 (34%), Positives = 121/283 (42%), Gaps = 3/283 (1%)
 Frame = -1

Query: 847  PLQDQKLHNAIDHDH-QPPFSQMSQKPMQLPGTLNRAPHASVSRDXXXXXXXXXXXQPHS 671
            PLQ QKLHNAIDH+H +PPF QMSQKPMQLP  LNRAPH  +++D            P  
Sbjct: 591  PLQHQKLHNAIDHEHPRPPFPQMSQKPMQLPVNLNRAPHVPITQDFSPSLQRHQSQSPQ- 649

Query: 670  LHNLLXXXXXXXXXXXXXXXQLRHHHPFLHXXXXXXXXXXXXXXXXXLIHSEKPQTLSHI 491
                                Q R+H P +H                  I SEK  TLS++
Sbjct: 650  -------------LSSTPFTQSRYHPPLMHQSQPEFSQQQAQTHSQPSIRSEKSTTLSNL 696

Query: 490  S-GTPQLHGFSGDIPPTNXXXXXXXXXXXSLLAAIMSSGLPPNNPPTELRNFNLQXXXXX 314
            + G+ Q    S                   LLAAIM +GL  N+ PT L+NFN+Q     
Sbjct: 697  ADGSGQSSTSS-------------------LLAAIMKTGLLSNSSPTGLQNFNIQPPLPS 737

Query: 313  XXXPIQALT-XXXXXXXXXXSLQTSQGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQ 137
               PIQALT           SLQ+SQ +                               Q
Sbjct: 738  GPPPIQALTPSGPLVTSSSLSLQSSQAN---TPSLTASLPGVVLPPLPPGPPPSSSVVPQ 794

Query: 136  RSNTNNAIPNPXXXXXXXLVAKGLISSPATEKPTASSILVPTK 8
            +S+T +A+ NP       LV KGLISSPATE PT SS  +  K
Sbjct: 795  KSSTVSAVSNPLSSLLSSLVEKGLISSPATEMPTVSSSQLSNK 837