BLASTX nr result
ID: Ophiopogon22_contig00007240
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00007240
(757 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010039339.1| PREDICTED: sm-like protein LSM36B isoform X1... 115 3e-29
ref|XP_010039336.1| PREDICTED: sm-like protein LSM36B isoform X1... 112 3e-28
ref|XP_010066109.1| PREDICTED: sm-like protein LSM36B isoform X1... 112 3e-28
gb|KCW63906.1| hypothetical protein EUGRSUZ_G01588 [Eucalyptus g... 112 3e-28
ref|XP_010051854.1| PREDICTED: sm-like protein LSM36B [Eucalyptu... 103 1e-24
gb|EOA24924.1| hypothetical protein CARUB_v10018215mg [Capsella ... 104 2e-24
gb|ABK26542.1| unknown [Picea sitchensis] 102 3e-24
gb|ABK22473.1| unknown [Picea sitchensis] 102 3e-24
ref|XP_001755347.1| predicted protein [Physcomitrella patens] >g... 102 4e-24
dbj|GAU40522.1| hypothetical protein TSUD_92940 [Trifolium subte... 102 4e-24
ref|XP_002502738.1| predicted protein [Micromonas commoda] >gi|2... 101 6e-24
dbj|GAQ84003.1| U6 snRNA-associated Sm-like protein LSm6 [Klebso... 100 7e-24
dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subt... 100 8e-24
gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max] 100 8e-24
ref|XP_009404215.1| PREDICTED: U6 snRNA-associated Sm-like prote... 101 9e-24
ref|XP_019465277.1| PREDICTED: sm-like protein LSM6A [Lupinus an... 100 9e-24
ref|XP_018444714.1| PREDICTED: sm-like protein LSM36B [Raphanus ... 100 9e-24
ref|XP_019703523.1| PREDICTED: U6 snRNA-associated Sm-like prote... 100 1e-23
ref|XP_018491577.1| PREDICTED: sm-like protein LSM6A [Raphanus s... 100 1e-23
ref|XP_022974953.1| U6 snRNA-associated Sm-like protein LSm6 [Cu... 100 1e-23
>ref|XP_010039339.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
gb|KCW46063.1| hypothetical protein EUGRSUZ_L00039 [Eucalyptus grandis]
Length = 94
Score = 115 bits (287), Expect = 3e-29
Identities = 59/74 (79%), Positives = 60/74 (81%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYRG ILACLDGYMNIAMEQTEEYV
Sbjct: 14 KTPADFLKSIRGRPVVVKLNSGVDYRG-------------ILACLDGYMNIAMEQTEEYV 60
Query: 158 NGQLKNNSLHQHIK 117
NGQLKNNS+HQH K
Sbjct: 61 NGQLKNNSVHQHFK 74
>ref|XP_010039336.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
Length = 93
Score = 112 bits (281), Expect = 3e-28
Identities = 58/74 (78%), Positives = 60/74 (81%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYRG ILACLDGYMNIAMEQTEEYV
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRG-------------ILACLDGYMNIAMEQTEEYV 59
Query: 158 NGQLKNNSLHQHIK 117
NGQLKNNS+HQ+ K
Sbjct: 60 NGQLKNNSVHQYFK 73
>ref|XP_010066109.1| PREDICTED: sm-like protein LSM36B isoform X1 [Eucalyptus grandis]
Length = 94
Score = 112 bits (281), Expect = 3e-28
Identities = 58/74 (78%), Positives = 60/74 (81%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYRG ILACLDGYMNIAMEQTEEYV
Sbjct: 14 KTPADFLKSIRGRPVVVKLNSGVDYRG-------------ILACLDGYMNIAMEQTEEYV 60
Query: 158 NGQLKNNSLHQHIK 117
NGQLKNNS+HQ+ K
Sbjct: 61 NGQLKNNSVHQYFK 74
>gb|KCW63906.1| hypothetical protein EUGRSUZ_G01588 [Eucalyptus grandis]
Length = 94
Score = 112 bits (281), Expect = 3e-28
Identities = 58/74 (78%), Positives = 60/74 (81%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYRG ILACLDGYMNIAMEQTEEYV
Sbjct: 14 KTPADFLKSIRGRPVVVKLNSGVDYRG-------------ILACLDGYMNIAMEQTEEYV 60
Query: 158 NGQLKNNSLHQHIK 117
NGQLKNNS+HQ+ K
Sbjct: 61 NGQLKNNSVHQYFK 74
>ref|XP_010051854.1| PREDICTED: sm-like protein LSM36B [Eucalyptus grandis]
ref|XP_010051855.1| PREDICTED: sm-like protein LSM36B [Eucalyptus grandis]
gb|KCW75680.1| hypothetical protein EUGRSUZ_D00038 [Eucalyptus grandis]
Length = 91
Score = 103 bits (256), Expect = 1e-24
Identities = 54/67 (80%), Positives = 54/67 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYRG ILACLDGYMNIAMEQTEEYV
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYRG-------------ILACLDGYMNIAMEQTEEYV 59
Query: 158 NGQLKNN 138
NGQLKNN
Sbjct: 60 NGQLKNN 66
>gb|EOA24924.1| hypothetical protein CARUB_v10018215mg [Capsella rubella]
Length = 137
Score = 104 bits (259), Expect = 2e-24
Identities = 53/66 (80%), Positives = 54/66 (81%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR T G+LACLDGYMNIAMEQTEEYV
Sbjct: 46 KTPADFLKSIRGRPVVVKLNSGVDYRELLAKTTQVTSFEGVLACLDGYMNIAMEQTEEYV 105
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 106 NGQLKN 111
>gb|ABK26542.1| unknown [Picea sitchensis]
Length = 91
Score = 102 bits (254), Expect = 3e-24
Identities = 54/67 (80%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEY
Sbjct: 12 AKTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEY 58
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 59 VNGQLKN 65
>gb|ABK22473.1| unknown [Picea sitchensis]
Length = 91
Score = 102 bits (254), Expect = 3e-24
Identities = 54/67 (80%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEY
Sbjct: 12 AKTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEY 58
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 59 VNGQLKN 65
>ref|XP_001755347.1| predicted protein [Physcomitrella patens]
gb|PNR34701.1| hypothetical protein PHYPA_022599 [Physcomitrella patens]
Length = 91
Score = 102 bits (253), Expect = 4e-24
Identities = 53/67 (79%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTPADFLKSIRGRPVVVKLNSGVDYR G+LACLDGYMNIAMEQTEEY
Sbjct: 14 AKTPADFLKSIRGRPVVVKLNSGVDYR-------------GVLACLDGYMNIAMEQTEEY 60
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 61 VNGQLKN 67
>dbj|GAU40522.1| hypothetical protein TSUD_92940 [Trifolium subterraneum]
Length = 104
Score = 102 bits (254), Expect = 4e-24
Identities = 55/67 (82%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCA-TC*RISTRHSGILACLDGYMNIAMEQTEEY 162
KTPADFLKSIRGRPVVVKLNSGVDYR + T +S GILACLDGYMNIAMEQTEEY
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYRVASDTSLVLSHIGVGILACLDGYMNIAMEQTEEY 71
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 72 VNGQLKN 78
>ref|XP_002502738.1| predicted protein [Micromonas commoda]
gb|ACO63996.1| predicted protein [Micromonas commoda]
Length = 86
Score = 101 bits (251), Expect = 6e-24
Identities = 53/67 (79%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTPADFLKSIRG+PVVVKLNSGVDYR GILACLDGYMNIAMEQTEEY
Sbjct: 12 AKTPADFLKSIRGKPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEY 58
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 59 VNGQLKN 65
>dbj|GAQ84003.1| U6 snRNA-associated Sm-like protein LSm6 [Klebsormidium nitens]
Length = 79
Score = 100 bits (250), Expect = 7e-24
Identities = 52/67 (77%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTPADFLK+IRGRPVVVKLNSGVDYR G+LACLDGYMNIAMEQTEEY
Sbjct: 5 AKTPADFLKAIRGRPVVVKLNSGVDYR-------------GVLACLDGYMNIAMEQTEEY 51
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 52 VNGQLKN 58
>dbj|GAU17248.1| hypothetical protein TSUD_109630 [Trifolium subterraneum]
Length = 80
Score = 100 bits (250), Expect = 8e-24
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 12 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 58
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 59 NGQLKN 64
>gb|KRH40502.1| hypothetical protein GLYMA_09G262700 [Glycine max]
Length = 80
Score = 100 bits (250), Expect = 8e-24
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 59
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 60 NGQLKN 65
>ref|XP_009404215.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Musa acuminata
subsp. malaccensis]
Length = 97
Score = 101 bits (251), Expect = 9e-24
Identities = 53/67 (79%), Positives = 54/67 (80%)
Frame = -3
Query: 341 AKTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEY 162
AKTP+DFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEY
Sbjct: 18 AKTPSDFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEY 64
Query: 161 VNGQLKN 141
VNGQLKN
Sbjct: 65 VNGQLKN 71
>ref|XP_019465277.1| PREDICTED: sm-like protein LSM6A [Lupinus angustifolius]
gb|OIW17652.1| hypothetical protein TanjilG_29002 [Lupinus angustifolius]
Length = 88
Score = 100 bits (250), Expect = 9e-24
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 10 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 56
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 57 NGQLKN 62
>ref|XP_018444714.1| PREDICTED: sm-like protein LSM36B [Raphanus sativus]
Length = 88
Score = 100 bits (250), Expect = 9e-24
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 10 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 56
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 57 NGQLKN 62
>ref|XP_019703523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Elaeis
guineensis]
Length = 89
Score = 100 bits (250), Expect = 1e-23
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 11 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 57
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 58 NGQLKN 63
>ref|XP_018491577.1| PREDICTED: sm-like protein LSM6A [Raphanus sativus]
ref|XP_018491578.1| PREDICTED: sm-like protein LSM6A [Raphanus sativus]
Length = 89
Score = 100 bits (250), Expect = 1e-23
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 11 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 57
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 58 NGQLKN 63
>ref|XP_022974953.1| U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima]
ref|XP_022974991.1| U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima]
ref|XP_022975016.1| U6 snRNA-associated Sm-like protein LSm6 [Cucurbita maxima]
Length = 90
Score = 100 bits (250), Expect = 1e-23
Identities = 53/66 (80%), Positives = 53/66 (80%)
Frame = -3
Query: 338 KTPADFLKSIRGRPVVVKLNSGVDYRGCATC*RISTRHSGILACLDGYMNIAMEQTEEYV 159
KTPADFLKSIRGRPVVVKLNSGVDYR GILACLDGYMNIAMEQTEEYV
Sbjct: 13 KTPADFLKSIRGRPVVVKLNSGVDYR-------------GILACLDGYMNIAMEQTEEYV 59
Query: 158 NGQLKN 141
NGQLKN
Sbjct: 60 NGQLKN 65