BLASTX nr result
ID: Ophiopogon22_contig00005954
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00005954
(371 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA63683.1| putative U6 snRNA-associated Sm-like protein LSm4... 67 7e-12
ref|XP_010909268.1| PREDICTED: sm-like protein LSM2 [Elaeis guin... 67 7e-12
ref|XP_010931941.1| PREDICTED: sm-like protein LSM2 [Elaeis guin... 67 7e-12
ref|XP_009412169.1| PREDICTED: sm-like protein LSM2 [Musa acumin... 67 7e-12
ref|XP_008802647.1| PREDICTED: sm-like protein LSM2 [Phoenix dac... 67 7e-12
ref|XP_008793665.1| PREDICTED: sm-like protein LSM2 [Phoenix dac... 67 7e-12
ref|XP_008790996.1| PREDICTED: sm-like protein LSM2 [Phoenix dac... 67 7e-12
ref|XP_001782631.1| predicted protein [Physcomitrella patens] >g... 66 9e-12
ref|XP_022010638.1| sm-like protein LSM2 [Helianthus annuus] >gi... 66 1e-11
ref|XP_010522691.1| PREDICTED: sm-like protein LSM2 [Tarenaya ha... 66 1e-11
ref|XP_010278777.1| PREDICTED: sm-like protein LSM2 [Nelumbo nuc... 66 1e-11
ref|XP_006444137.1| sm-like protein LSM2 [Citrus clementina] >gi... 65 2e-11
ref|XP_006384992.1| hypothetical protein POPTR_0004s22870g [Popu... 64 3e-11
gb|ABK93357.1| unknown [Populus trichocarpa] 64 3e-11
ref|XP_015166561.1| PREDICTED: sm-like protein LSM2 isoform X2 [... 64 4e-11
gb|KDP21502.1| hypothetical protein JCGZ_21973 [Jatropha curcas] 64 4e-11
ref|XP_022963466.1| sm-like protein LSM2 [Cucurbita moschata] >g... 64 5e-11
gb|PHT52420.1| U6 snRNA-associated Sm-like protein LSm2, partial... 64 5e-11
ref|XP_022727482.1| sm-like protein LSM2 isoform X2 [Durio zibet... 64 5e-11
ref|XP_022758167.1| sm-like protein LSM2 [Durio zibethinus] 64 5e-11
>gb|PKA63683.1| putative U6 snRNA-associated Sm-like protein LSm4 [Apostasia
shenzhenica]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_010909268.1| PREDICTED: sm-like protein LSM2 [Elaeis guineensis]
ref|XP_020107744.1| sm-like protein LSM2 [Ananas comosus]
ref|XP_020273976.1| sm-like protein LSM2 [Asparagus officinalis]
gb|ONK62865.1| uncharacterized protein A4U43_C07F8940 [Asparagus officinalis]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_010931941.1| PREDICTED: sm-like protein LSM2 [Elaeis guineensis]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_009412169.1| PREDICTED: sm-like protein LSM2 [Musa acuminata subsp. malaccensis]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_008802647.1| PREDICTED: sm-like protein LSM2 [Phoenix dactylifera]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_008793665.1| PREDICTED: sm-like protein LSM2 [Phoenix dactylifera]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_008790996.1| PREDICTED: sm-like protein LSM2 [Phoenix dactylifera]
Length = 93
Score = 66.6 bits (161), Expect = 7e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDIDILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDILHDATRREARGG 93
>ref|XP_001782631.1| predicted protein [Physcomitrella patens]
gb|PNR60157.1| hypothetical protein PHYPA_002950 [Physcomitrella patens]
Length = 93
Score = 66.2 bits (160), Expect = 9e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVD+DILHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDVDILHDATRREARGG 93
>ref|XP_022010638.1| sm-like protein LSM2 [Helianthus annuus]
gb|OTF93919.1| putative LSM domain, U6 snRNA-associated Sm-like protein LSm2
[Helianthus annuus]
Length = 93
Score = 65.9 bits (159), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDID+LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDLLHDATRREARGG 93
>ref|XP_010522691.1| PREDICTED: sm-like protein LSM2 [Tarenaya hassleriana]
Length = 93
Score = 65.9 bits (159), Expect = 1e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVD+D+LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDVDVLHDATRREARGG 93
>ref|XP_010278777.1| PREDICTED: sm-like protein LSM2 [Nelumbo nucifera]
Length = 93
Score = 65.9 bits (159), Expect = 1e-11
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDID+LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIDLLHDATRREARGG 93
>ref|XP_006444137.1| sm-like protein LSM2 [Citrus clementina]
ref|XP_006479772.1| PREDICTED: sm-like protein LSM2 [Citrus sinensis]
ref|XP_017250393.1| PREDICTED: sm-like protein LSM2 [Daucus carota subsp. sativus]
gb|ESR57377.1| hypothetical protein CICLE_v10023059mg [Citrus clementina]
gb|KDO68821.1| hypothetical protein CISIN_1g034490mg [Citrus sinensis]
dbj|GAY40753.1| hypothetical protein CUMW_054350 [Citrus unshiu]
Length = 93
Score = 65.5 bits (158), Expect = 2e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVD+D+LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDVDLLHDATRREARGG 93
>ref|XP_006384992.1| hypothetical protein POPTR_0004s22870g [Populus trichocarpa]
Length = 52
Score = 63.9 bits (154), Expect = 3e-11
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPP+GVD+D+LHDATRREARGG
Sbjct: 22 RGSVVRYVQLPPEGVDVDLLHDATRREARGG 52
>gb|ABK93357.1| unknown [Populus trichocarpa]
Length = 54
Score = 63.9 bits (154), Expect = 3e-11
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPP+GVD+D+LHDATRREARGG
Sbjct: 24 RGSVVRYVQLPPEGVDVDLLHDATRREARGG 54
>ref|XP_015166561.1| PREDICTED: sm-like protein LSM2 isoform X2 [Solanum tuberosum]
Length = 84
Score = 64.3 bits (155), Expect = 4e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDI++LHDATRREARGG
Sbjct: 54 RGSVVRYVQLPPDGVDIELLHDATRREARGG 84
>gb|KDP21502.1| hypothetical protein JCGZ_21973 [Jatropha curcas]
Length = 86
Score = 64.3 bits (155), Expect = 4e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPP+GVDID+LHDATRREARGG
Sbjct: 56 RGSVVRYVQLPPEGVDIDLLHDATRREARGG 86
>ref|XP_022963466.1| sm-like protein LSM2 [Cucurbita moschata]
ref|XP_022967419.1| sm-like protein LSM2 [Cucurbita maxima]
ref|XP_023553723.1| sm-like protein LSM2 [Cucurbita pepo subsp. pepo]
Length = 93
Score = 64.3 bits (155), Expect = 5e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDI++LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIELLHDATRREARGG 93
>gb|PHT52420.1| U6 snRNA-associated Sm-like protein LSm2, partial [Capsicum
baccatum]
gb|PHT86315.1| U6 snRNA-associated Sm-like protein LSm2, partial [Capsicum annuum]
gb|PHU22213.1| U6 snRNA-associated Sm-like protein LSm2, partial [Capsicum
chinense]
Length = 93
Score = 64.3 bits (155), Expect = 5e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDI++LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIELLHDATRREARGG 93
>ref|XP_022727482.1| sm-like protein LSM2 isoform X2 [Durio zibethinus]
Length = 93
Score = 64.3 bits (155), Expect = 5e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDI++LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIELLHDATRREARGG 93
>ref|XP_022758167.1| sm-like protein LSM2 [Durio zibethinus]
Length = 93
Score = 64.3 bits (155), Expect = 5e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = -3
Query: 369 RGSVVRYVQLPPDGVDIDILHDATRREARGG 277
RGSVVRYVQLPPDGVDI++LHDATRREARGG
Sbjct: 63 RGSVVRYVQLPPDGVDIELLHDATRREARGG 93