BLASTX nr result
ID: Ophiopogon22_contig00005952
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00005952
(446 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012471268.1| PREDICTED: elongin-C isoform X2 [Gossypium r... 54 8e-07
ref|XP_012471266.1| PREDICTED: transcription elongation factor B... 54 9e-07
ref|XP_012464142.1| PREDICTED: transcription elongation factor B... 54 1e-06
ref|XP_023641139.1| elongin-C [Capsella rubella] 54 2e-06
ref|XP_018453315.1| PREDICTED: transcription elongation factor B... 54 2e-06
ref|XP_013609450.1| PREDICTED: transcription elongation factor B... 54 2e-06
ref|XP_010443665.1| PREDICTED: transcription elongation factor B... 54 2e-06
ref|XP_010454733.1| PREDICTED: transcription elongation factor B... 54 2e-06
ref|XP_009132013.1| PREDICTED: transcription elongation factor B... 54 2e-06
emb|CDY33015.1| BnaA10g12210D [Brassica napus] 54 2e-06
ref|NP_568900.1| BTB/POZ domain-containing protein [Arabidopsis ... 54 2e-06
ref|XP_010535439.1| PREDICTED: transcription elongation factor B... 54 2e-06
ref|XP_009120429.1| PREDICTED: transcription elongation factor B... 53 2e-06
gb|PPS06430.1| hypothetical protein GOBAR_AA14217 [Gossypium bar... 53 2e-06
ref|XP_022755830.1| elongin-C-like [Durio zibethinus] 53 2e-06
ref|XP_022752707.1| elongin-C-like [Durio zibethinus] 53 2e-06
ref|XP_012464146.1| PREDICTED: transcription elongation factor B... 53 2e-06
ref|XP_007016290.1| PREDICTED: transcription elongation factor B... 53 2e-06
gb|EOA14224.1| hypothetical protein CARUB_v10027380mg [Capsella ... 54 3e-06
ref|XP_021864831.1| elongin-C [Spinacia oleracea] >gi|902234690|... 53 3e-06
>ref|XP_012471268.1| PREDICTED: elongin-C isoform X2 [Gossypium raimondii]
Length = 91
Score = 54.3 bits (129), Expect = 8e-07
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ R+ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 50 ILERICQYFYWALQYS----RGKETEFHIEPELTLELMMAANYLH 90
>ref|XP_012471266.1| PREDICTED: transcription elongation factor B polypeptide 1 isoform
X1 [Gossypium raimondii]
ref|XP_012471267.1| PREDICTED: transcription elongation factor B polypeptide 1 isoform
X1 [Gossypium raimondii]
gb|KJB17246.1| hypothetical protein B456_003G1279001 [Gossypium raimondii]
gb|KJB17247.1| hypothetical protein B456_003G1279001 [Gossypium raimondii]
Length = 98
Score = 54.3 bits (129), Expect = 9e-07
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ R+ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 57 ILERICQYFYWALQYS----RGKETEFHIEPELTLELMMAANYLH 97
>ref|XP_012464142.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X1 [Gossypium raimondii]
ref|XP_012464143.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X1 [Gossypium raimondii]
ref|XP_012464145.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X1 [Gossypium raimondii]
Length = 103
Score = 54.3 bits (129), Expect = 1e-06
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -3
Query: 375 WD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
W Y SY+ RGKETEF IEPELTLELMMAANYLH
Sbjct: 67 WSLQYSSYNF--VRGKETEFHIEPELTLELMMAANYLH 102
>ref|XP_023641139.1| elongin-C [Capsella rubella]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTPILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>ref|XP_018453315.1| PREDICTED: transcription elongation factor B polypeptide 1 isoform
X2 [Raphanus sativus]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>ref|XP_013609450.1| PREDICTED: transcription elongation factor B polypeptide 1
[Brassica oleracea var. oleracea]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>ref|XP_010443665.1| PREDICTED: transcription elongation factor B polypeptide 1
[Camelina sativa]
ref|XP_010483536.1| PREDICTED: transcription elongation factor B polypeptide 1
[Camelina sativa]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTPILEKICQYFYWSLQYS----RGKETEFYIEPELTLELMMAANYLH 95
>ref|XP_010454733.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Camelina sativa]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTPILEKICQYFYWSLQYS----RGKETEFYIEPELTLELMMAANYLH 95
>ref|XP_009132013.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Brassica rapa]
ref|XP_013626374.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Brassica oleracea var. oleracea]
ref|XP_013740285.1| elongin-C-like [Brassica napus]
ref|XP_013682387.1| elongin-C-like [Brassica napus]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>emb|CDY33015.1| BnaA10g12210D [Brassica napus]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>ref|NP_568900.1| BTB/POZ domain-containing protein [Arabidopsis thaliana]
ref|XP_002863037.1| elongin-C [Arabidopsis lyrata subsp. lyrata]
ref|XP_002864612.1| elongin-C [Arabidopsis lyrata subsp. lyrata]
ref|XP_006400994.1| elongin-C [Eutrema salsugineum]
ref|XP_013729601.1| elongin-C [Brassica napus]
dbj|BAB09760.1| unnamed protein product [Arabidopsis thaliana]
gb|AAK76669.1| putative elongin protein [Arabidopsis thaliana]
gb|AAM20264.1| unknown protein [Arabidopsis thaliana]
gb|EFH39296.1| SKP1 family protein [Arabidopsis lyrata subsp. lyrata]
gb|EFH40871.1| SKP1 family protein [Arabidopsis lyrata subsp. lyrata]
gb|AED97148.1| BTB/POZ domain-containing protein [Arabidopsis thaliana]
gb|ESQ42447.1| hypothetical protein EUTSA_v10015122mg [Eutrema salsugineum]
Length = 96
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 95
>ref|XP_010535439.1| PREDICTED: transcription elongation factor B polypeptide 1
[Tarenaya hassleriana]
Length = 98
Score = 53.5 bits (127), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 53 ISTTILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 97
>ref|XP_009120429.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Brassica rapa]
ref|XP_013716675.1| elongin-C-like [Brassica napus]
Length = 96
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 51 ISTTILEKICQYFYWSIQYS----RGKETEFHIEPELTLELMMAANYLH 95
>gb|PPS06430.1| hypothetical protein GOBAR_AA14217 [Gossypium barbadense]
Length = 97
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 56 ILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 96
>ref|XP_022755830.1| elongin-C-like [Durio zibethinus]
Length = 98
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 57 ILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 97
>ref|XP_022752707.1| elongin-C-like [Durio zibethinus]
Length = 98
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 57 ILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 97
>ref|XP_012464146.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X2 [Gossypium raimondii]
ref|XP_012464147.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X2 [Gossypium raimondii]
ref|XP_012464148.1| PREDICTED: transcription elongation factor B polypeptide 1-like
isoform X2 [Gossypium raimondii]
ref|XP_016732877.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Gossypium hirsutum]
ref|XP_016723121.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Gossypium hirsutum]
ref|XP_016723185.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Gossypium hirsutum]
ref|XP_016723252.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Gossypium hirsutum]
ref|XP_017643303.1| PREDICTED: transcription elongation factor B polypeptide 1-like
[Gossypium arboreum]
gb|KHF98969.1| Transcription elongation factor B polypeptide 1 [Gossypium
arboreum]
gb|KJB83728.1| hypothetical protein B456_013G261600 [Gossypium raimondii]
gb|KJB83729.1| hypothetical protein B456_013G261600 [Gossypium raimondii]
gb|KJB83730.1| hypothetical protein B456_013G261600 [Gossypium raimondii]
gb|KJB83731.1| hypothetical protein B456_013G261600 [Gossypium raimondii]
gb|KJB83732.1| hypothetical protein B456_013G261600 [Gossypium raimondii]
Length = 98
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 57 ILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 97
>ref|XP_007016290.1| PREDICTED: transcription elongation factor B polypeptide 1
[Theobroma cacao]
gb|EOY33909.1| BTB/POZ domain-containing protein [Theobroma cacao]
Length = 98
Score = 53.1 bits (126), Expect = 2e-06
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = -3
Query: 396 IMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 57 ILEKICQYFYWSLQYS----RGKETEFYIEPELTLELMMAANYLH 97
>gb|EOA14224.1| hypothetical protein CARUB_v10027380mg [Capsella rubella]
Length = 123
Score = 53.5 bits (127), Expect = 3e-06
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W YS RGKETEF IEPELTLELMMAANYLH
Sbjct: 78 ISTPILEKICQYFYWSLQYS----RGKETEFHIEPELTLELMMAANYLH 122
>ref|XP_021864831.1| elongin-C [Spinacia oleracea]
gb|KNA23545.1| hypothetical protein SOVF_023970 [Spinacia oleracea]
Length = 98
Score = 52.8 bits (125), Expect = 3e-06
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = -3
Query: 408 LRSKIMARVAIWD*WYRSYSVP*YRGKETEFAIEPELTLELMMAANYLH 262
+ + I+ ++ + W R Y+ GKETEF IEPELTLELMMAANYLH
Sbjct: 53 ISTTILEKICQYFYWSRQYA----SGKETEFHIEPELTLELMMAANYLH 97