BLASTX nr result

ID: Ophiopogon22_contig00005430 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00005430
         (648 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [A...   101   7e-23
ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [A...    57   4e-06

>ref|XP_020241391.1| homeobox-leucine zipper protein HOX6-like [Asparagus officinalis]
 gb|ONK58841.1| uncharacterized protein A4U43_C08F290 [Asparagus officinalis]
          Length = 224

 Score =  101 bits (252), Expect = 7e-23
 Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
 Frame = +3

Query: 3   LSSFESLKNXXXXXXXXXXXXXXXXDRPSTEGRGKD-----VQIRPNLLLAVETDTRQIS 167
           LS+FESLK+                ++P  E RG +        RPNL+L  +T+ R +S
Sbjct: 104 LSNFESLKHEKQLLAKQLQKLAELLEKPMEE-RGNESDQEKADQRPNLMLTEKTEMRLMS 162

Query: 168 SDD-EENQYRKYSEKETEDLFGEPPPIGGLLVPSEQQQQFCFRQPSWPADQSCATSQWWE 344
           SDD EEN++ + SEKE +   G  PP GG LVPSEQQ  FCF QPSWP DQ+CA SQWWE
Sbjct: 163 SDDDEENRHTRCSEKEKDFFSG--PPTGGSLVPSEQQ--FCFHQPSWPTDQACANSQWWE 218

Query: 345 FDR*NE 362
           F   NE
Sbjct: 219 FWPMNE 224


>ref|XP_020114943.1| homeobox-leucine zipper protein HOX6-like [Ananas comosus]
 gb|OAY67743.1| Homeobox-leucine zipper protein HOX6 [Ananas comosus]
          Length = 234

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
 Frame = +3

Query: 3   LSSFESLKNXXXXXXXXXXXXXXXXDRPSTEGRGK------------DVQIRPNLLLAVE 146
           L+SF+SLK                 D+P  EGR +                RPN  +  E
Sbjct: 105 LASFDSLKKEKHMLLKQLQKLNGLLDKPQ-EGRSRCYGDSENADLNGATDKRPNFQMKEE 163

Query: 147 TDTRQIS-SDDEENQYRKYSEKETEDLFGEPPPIGGLLVPSEQQQQFCFRQPSWPADQSC 323
           +D R +  SD+E+ ++     ++  +L+         L  SE + QF F Q SWP+DQSC
Sbjct: 164 SDARVVPYSDEEDKKFPCLISEDEAELYTVQQQACSTLT-SEVEDQFGF-QTSWPSDQSC 221

Query: 324 ATSQWWEFDR*NE 362
            ++QWWEF   NE
Sbjct: 222 TSTQWWEFWPMNE 234


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