BLASTX nr result

ID: Ophiopogon22_contig00005032 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00005032
         (408 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020256258.1| U1 small nuclear ribonucleoprotein 70 kDa [A...    72   4e-12
ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotei...    68   1e-10
ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotei...    63   9e-09
ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotei...    61   3e-08
ref|XP_010933717.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   4e-07
ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   4e-07

>ref|XP_020256258.1| U1 small nuclear ribonucleoprotein 70 kDa [Asparagus officinalis]
 gb|ONK74490.1| uncharacterized protein A4U43_C03F6810 [Asparagus officinalis]
          Length = 501

 Score = 72.4 bits (176), Expect = 4e-12
 Identities = 38/62 (61%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = +2

Query: 20  QPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQVGYRG-QFEHEDPEAREEGEAVAEHDYA 196
           QP GP+ET+H R+R K+  P YYDD        GYRG  F+  DPEAREEGEAVAEHDY 
Sbjct: 410 QPDGPTETDHRRERAKQ--PGYYDD--------GYRGVHFDQGDPEAREEGEAVAEHDYG 459

Query: 197 YQ 202
           YQ
Sbjct: 460 YQ 461


>ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera]
 ref|XP_008783466.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera]
          Length = 512

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   ERYENLQPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQV-GYRGQFEHEDPEAREEGEAV 178
           ++Y++LQPHG +E E+  +R KRH PEYY D  YD+ Q+  Y  Q+ H D E REEGEAV
Sbjct: 434 KQYDHLQPHGLAEPENTGERSKRHEPEYY-DKTYDEGQLDSYPRQYGHVDSEPREEGEAV 492

Query: 179 AEHDYAY 199
            + D+ Y
Sbjct: 493 DDQDFGY 499


>ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
           acuminata subsp. malaccensis]
          Length = 510

 Score = 62.8 bits (151), Expect = 9e-09
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   ERYENLQPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQVG-YRGQFEHEDPEAREEGEAV 178
           ++Y+ +Q  G  E EH+++R  RH  +YYD   YDK Q G Y  Q+ + D EAREEGEAV
Sbjct: 432 QQYDRVQHQGVVEPEHEQERPSRHEGDYYDRAPYDKGQAGDYHHQYGYADYEAREEGEAV 491

Query: 179 AEHDYAY 199
            + DY Y
Sbjct: 492 GD-DYGY 497


>ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Elaeis
           guineensis]
          Length = 520

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   ERYENLQPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQ-VGYRGQFEHEDPEAREEGEAV 178
           E+Y+  + HG  + +HD +  +RH  EYYD   YDKV  V Y  +F     E+REEGEA 
Sbjct: 441 EQYDYQEHHGLGDPQHDLEHPRRHDHEYYDHAPYDKVDPVNYHSEFNRAGSESREEGEAF 500

Query: 179 AEHDYAY 199
            + DY +
Sbjct: 501 GDQDYEH 507


>ref|XP_010933717.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X2 [Elaeis guineensis]
          Length = 475

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   ERYENLQPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQ-VGYRGQFEHEDPEAREEGEAV 178
           E+Y+  Q HG  + ++D +R +R   EY++   YDKV  V Y GQF H + E+REEGEA 
Sbjct: 411 EQYD-FQLHGLGDPQNDSERSRRQDHEYHNHVPYDKVDHVNYHGQFNHVESESREEGEAF 469

Query: 179 AEHDY 193
            + DY
Sbjct: 470 GDQDY 474


>ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Elaeis guineensis]
          Length = 500

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2   ERYENLQPHGPSETEHDRQRVKRHGPEYYDDHQYDKVQ-VGYRGQFEHEDPEAREEGEAV 178
           E+Y+  Q HG  + ++D +R +R   EY++   YDKV  V Y GQF H + E+REEGEA 
Sbjct: 436 EQYD-FQLHGLGDPQNDSERSRRQDHEYHNHVPYDKVDHVNYHGQFNHVESESREEGEAF 494

Query: 179 AEHDY 193
            + DY
Sbjct: 495 GDQDY 499


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