BLASTX nr result
ID: Ophiopogon22_contig00005000
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00005000
(496 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020242601.1| LOW QUALITY PROTEIN: protein PLASTID MOVEMEN... 132 1e-32
ref|XP_020582515.1| LOW QUALITY PROTEIN: rubisco accumulation fa... 82 3e-15
ref|XP_020687620.1| rubisco accumulation factor 1, chloroplastic... 81 1e-14
ref|XP_010918827.1| PREDICTED: rubisco accumulation factor 1, ch... 78 7e-14
ref|XP_009384042.1| PREDICTED: rubisco accumulation factor 1, ch... 78 9e-14
ref|XP_008775953.2| PREDICTED: LOW QUALITY PROTEIN: rubisco accu... 78 1e-13
gb|PKA66429.1| hypothetical protein AXF42_Ash007127 [Apostasia s... 77 2e-13
ref|XP_009382993.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED... 72 2e-11
ref|XP_004982996.1| rubisco accumulation factor 1, chloroplastic... 71 2e-11
ref|XP_010694774.1| PREDICTED: rubisco accumulation factor 1.1, ... 71 2e-11
ref|XP_022933155.1| rubisco accumulation factor 1.1, chloroplast... 71 3e-11
ref|XP_023531170.1| rubisco accumulation factor 1.1, chloroplast... 71 3e-11
ref|XP_021677217.1| rubisco accumulation factor 1.1, chloroplast... 71 3e-11
ref|XP_022965491.1| rubisco accumulation factor 1.1, chloroplast... 71 3e-11
ref|XP_015950440.2| LOW QUALITY PROTEIN: rubisco accumulation fa... 70 8e-11
ref|XP_016183986.1| rubisco accumulation factor 1.2, chloroplast... 70 8e-11
ref|XP_021677972.1| rubisco accumulation factor 1.1, chloroplast... 70 8e-11
gb|OMO72008.1| hypothetical protein CCACVL1_17987 [Corchorus cap... 70 8e-11
gb|PAN47106.1| hypothetical protein PAHAL_I03869 [Panicum hallii] 69 1e-10
ref|XP_015614647.1| PREDICTED: rubisco accumulation factor 1, ch... 69 1e-10
>ref|XP_020242601.1| LOW QUALITY PROTEIN: protein PLASTID MOVEMENT IMPAIRED 1-RELATED
1-like [Asparagus officinalis]
Length = 1134
Score = 132 bits (332), Expect = 1e-32
Identities = 75/107 (70%), Positives = 80/107 (74%), Gaps = 7/107 (6%)
Frame = +2
Query: 35 PNSNA---TSGDACLLHDIETLSKALSLDTKK----KPPPSRSISAPKSHRXXXXXXXXX 193
P+S+A SGDA LLHDIETLSKALSLD K K PPSRSISAPKSH
Sbjct: 74 PSSDAGSSASGDARLLHDIETLSKALSLDQKNRAQIKKPPSRSISAPKSH---------P 124
Query: 194 XXXKRSNSKPIKKQSFWSNFNPIKSLSAQFRSHRRFPCRFSLHVHSV 334
+ +NSKP KKQSFWSNFNPIKSLSAQFRSHRRFPCRFSLHVHS+
Sbjct: 125 QNPRNANSKP-KKQSFWSNFNPIKSLSAQFRSHRRFPCRFSLHVHSI 170
>ref|XP_020582515.1| LOW QUALITY PROTEIN: rubisco accumulation factor 1,
chloroplastic-like [Phalaenopsis equestris]
Length = 441
Score = 82.4 bits (202), Expect = 3e-15
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
+KYRSL +RL+ILRNRLGLWHE+APLISSLSHDGFTPPSIEE+
Sbjct: 70 AKYRSLGPVERLEILRNRLGLWHEYAPLISSLSHDGFTPPSIEEI 114
>ref|XP_020687620.1| rubisco accumulation factor 1, chloroplastic-like [Dendrobium
catenatum]
gb|PKU65286.1| hypothetical protein MA16_Dca026165 [Dendrobium catenatum]
Length = 444
Score = 80.9 bits (198), Expect = 1e-14
Identities = 37/45 (82%), Positives = 42/45 (93%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
+KYRSL A+RL+ILRNRLGLWHE+APLISSLS DGFTPPSIEE+
Sbjct: 67 AKYRSLGPAERLEILRNRLGLWHEYAPLISSLSRDGFTPPSIEEI 111
>ref|XP_010918827.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like
[Elaeis guineensis]
Length = 381
Score = 78.2 bits (191), Expect = 7e-14
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +1
Query: 364 KYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
KYRSL A+R+DILRNRLG WHE+APLI++L+HDGFTPPSIEE+
Sbjct: 73 KYRSLGPAERIDILRNRLGRWHEYAPLITALAHDGFTPPSIEEV 116
>ref|XP_009384042.1| PREDICTED: rubisco accumulation factor 1, chloroplastic-like [Musa
acuminata subsp. malaccensis]
Length = 456
Score = 78.2 bits (191), Expect = 9e-14
Identities = 35/45 (77%), Positives = 41/45 (91%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
+KYRSL A+RL+ILR+RLGLWHE+APLISSL HDGF PPSIEE+
Sbjct: 78 AKYRSLGTAERLEILRDRLGLWHEYAPLISSLGHDGFNPPSIEEV 122
>ref|XP_008775953.2| PREDICTED: LOW QUALITY PROTEIN: rubisco accumulation factor 1,
chloroplastic-like [Phoenix dactylifera]
Length = 448
Score = 77.8 bits (190), Expect = 1e-13
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = +1
Query: 364 KYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
KYRSLD A+RLDILRNR+GLWHE+APLI +L++DGF+PPSIEE
Sbjct: 73 KYRSLDPAERLDILRNRMGLWHEYAPLIPALANDGFSPPSIEE 115
>gb|PKA66429.1| hypothetical protein AXF42_Ash007127 [Apostasia shenzhenica]
Length = 469
Score = 77.0 bits (188), Expect = 2e-13
Identities = 35/45 (77%), Positives = 40/45 (88%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
+KYRSL A+RLDILR RLGLWHE+ PLISSLS DGFTPP+IEE+
Sbjct: 91 AKYRSLGLAERLDILRGRLGLWHEYGPLISSLSRDGFTPPTIEEI 135
>ref|XP_009382993.1| PREDICTED: protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 [Musa
acuminata subsp. malaccensis]
Length = 1202
Score = 71.6 bits (174), Expect = 2e-11
Identities = 46/110 (41%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Frame = +2
Query: 32 KPNSNATS---GDACLLHDIETLSKALSLDTKKKPPPS------RSISAPKSHRXXXXXX 184
KP S+ S G+A LH+IE LSKALS+D K+ P RSISA +SH
Sbjct: 11 KPGSSGGSDQQGNARFLHEIEALSKALSVDPKQPRHPRSSSDDRRSISAGRSHLKAPSNP 70
Query: 185 XXXXXXKRSNSKPIKKQSFWSNFNPIKSLSAQFRSHRRFPCRFSLHVHSV 334
K+ + K S W +NPIK + HRRF C FSLHVHS+
Sbjct: 71 KPSSSDKQKDKKKPGSSSLWG-WNPIKKALSHIGGHRRFDCCFSLHVHSI 119
>ref|XP_004982996.1| rubisco accumulation factor 1, chloroplastic-like [Setaria italica]
Length = 459
Score = 71.2 bits (173), Expect = 2e-11
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
SK+R+LD QRL++LR RLG WHE+APLIS+LS DGFTP SIEE
Sbjct: 86 SKFRTLDLTQRLEVLRERLGQWHEYAPLISALSRDGFTPSSIEE 129
>ref|XP_010694774.1| PREDICTED: rubisco accumulation factor 1.1, chloroplastic [Beta
vulgaris subsp. vulgaris]
gb|KMS98113.1| hypothetical protein BVRB_4g095590 [Beta vulgaris subsp. vulgaris]
Length = 461
Score = 71.2 bits (173), Expect = 2e-11
Identities = 32/44 (72%), Positives = 38/44 (86%)
Frame = +1
Query: 364 KYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
KY++LD A +D+L NRLGLW+E+APLISSL DGFTPPSIEEL
Sbjct: 86 KYKNLDTASIIDVLANRLGLWYEYAPLISSLFRDGFTPPSIEEL 129
>ref|XP_022933155.1| rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita
moschata]
Length = 447
Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S+YRSLD A +LD+L NRLGLW E+APLISSL +GFTPP+IEE+
Sbjct: 72 SQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIEEI 116
>ref|XP_023531170.1| rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita pepo
subsp. pepo]
Length = 450
Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S+YRSLD A +LD+L NRLGLW E+APLISSL +GFTPP+IEE+
Sbjct: 75 SQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIEEI 119
>ref|XP_021677217.1| rubisco accumulation factor 1.1, chloroplastic-like [Hevea
brasiliensis]
Length = 452
Score = 70.9 bits (172), Expect = 3e-11
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
S+YRSLD A RLDIL NRLGLW+E+APLI L +GFTPPSIEE
Sbjct: 75 SQYRSLDTASRLDILANRLGLWYEYAPLIPCLIREGFTPPSIEE 118
>ref|XP_022965491.1| rubisco accumulation factor 1.1, chloroplastic-like [Cucurbita
maxima]
Length = 480
Score = 70.9 bits (172), Expect = 3e-11
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S+YRSLD A +LD+L NRLGLW E+APLISSL +GFTPP+IEE+
Sbjct: 105 SQYRSLDAAGKLDVLANRLGLWFEYAPLISSLIQEGFTPPTIEEI 149
>ref|XP_015950440.2| LOW QUALITY PROTEIN: rubisco accumulation factor 1.2,
chloroplastic-like [Arachis duranensis]
Length = 417
Score = 69.7 bits (169), Expect = 8e-11
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S++ +LD A R+++L NRLG WHE+APLISSL DGFTPPSIEEL
Sbjct: 79 SQFATLDTAGRIEVLANRLGTWHEYAPLISSLIQDGFTPPSIEEL 123
>ref|XP_016183986.1| rubisco accumulation factor 1.2, chloroplastic [Arachis ipaensis]
Length = 447
Score = 69.7 bits (169), Expect = 8e-11
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S++ +LD A R+++L NRLG WHE+APLISSL DGFTPPSIEEL
Sbjct: 75 SQFATLDTAGRIEVLANRLGTWHEYAPLISSLIQDGFTPPSIEEL 119
>ref|XP_021677972.1| rubisco accumulation factor 1.1, chloroplastic-like [Hevea
brasiliensis]
Length = 452
Score = 69.7 bits (169), Expect = 8e-11
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
S+YRSLD A RLDIL NRLGLW+E+A LI SL +GFTPPSIEE
Sbjct: 76 SQYRSLDTASRLDILANRLGLWYEYATLIPSLIQEGFTPPSIEE 119
>gb|OMO72008.1| hypothetical protein CCACVL1_17987 [Corchorus capsularis]
Length = 461
Score = 69.7 bits (169), Expect = 8e-11
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEEL 495
S++RSLD A R+D+L +RLGLW E+APLISSL +GFTPPSIEEL
Sbjct: 92 SQFRSLDAAGRIDVLASRLGLWFEYAPLISSLYQEGFTPPSIEEL 136
>gb|PAN47106.1| hypothetical protein PAHAL_I03869 [Panicum hallii]
Length = 456
Score = 69.3 bits (168), Expect = 1e-10
Identities = 30/44 (68%), Positives = 38/44 (86%)
Frame = +1
Query: 361 SKYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
+ YR+LD QRL++LR+R+G WHE+APLIS+LS DGFTP SIEE
Sbjct: 83 ANYRTLDLTQRLEVLRDRMGQWHEYAPLISALSRDGFTPSSIEE 126
>ref|XP_015614647.1| PREDICTED: rubisco accumulation factor 1, chloroplastic [Oryza
sativa Japonica Group]
sp|Q7XDY9.1|RAF1_ORYSJ RecName: Full=Rubisco accumulation factor 1, chloroplastic; Flags:
Precursor
gb|AAP54002.1| expressed protein [Oryza sativa Japonica Group]
dbj|BAF26626.1| Os10g0445600 [Oryza sativa Japonica Group]
gb|EAZ16239.1| hypothetical protein OsJ_31693 [Oryza sativa Japonica Group]
dbj|BAH00120.1| unnamed protein product [Oryza sativa Japonica Group]
dbj|BAT11069.1| Os10g0445600 [Oryza sativa Japonica Group]
Length = 469
Score = 69.3 bits (168), Expect = 1e-10
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 364 KYRSLDQAQRLDILRNRLGLWHEFAPLISSLSHDGFTPPSIEE 492
KY+ LD QRL +LR+RLGLWHE+APLIS+LS +GFTP SIEE
Sbjct: 93 KYKDLDLGQRLAVLRDRLGLWHEYAPLISALSREGFTPSSIEE 135