BLASTX nr result

ID: Ophiopogon22_contig00004915 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00004915
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020241746.1| uncharacterized protein LOC109820088 [Aspara...    72   1e-13
ref|XP_020702789.1| uncharacterized protein LOC110114295 [Dendro...    52   2e-08

>ref|XP_020241746.1| uncharacterized protein LOC109820088 [Asparagus officinalis]
 gb|ONK60779.1| uncharacterized protein A4U43_C08F22520 [Asparagus officinalis]
          Length = 1033

 Score = 72.4 bits (176), Expect(2) = 1e-13
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = +3

Query: 141 MTPVIHCSAGNIHFFPRATLIQRKEIQLTKHNVSGHCNRL 260
           MTPVIHCS GNIHFFPRAT   RKEIQLTKHN++G+ NRL
Sbjct: 1   MTPVIHCSTGNIHFFPRATFTTRKEIQLTKHNINGNHNRL 40



 Score = 31.2 bits (69), Expect(2) = 1e-13
 Identities = 16/22 (72%), Positives = 18/22 (81%)
 Frame = +2

Query: 323 AVGADVTVEETNPAVSGEDADK 388
           AV ADVTVEE N +VS EDA+K
Sbjct: 77  AVRADVTVEEPNLSVSVEDAEK 98


>ref|XP_020702789.1| uncharacterized protein LOC110114295 [Dendrobium catenatum]
 ref|XP_020702790.1| uncharacterized protein LOC110114295 [Dendrobium catenatum]
 gb|PKU72389.1| Elongation factor Ts, chloroplastic [Dendrobium catenatum]
          Length = 1204

 Score = 52.4 bits (124), Expect(2) = 2e-08
 Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +3

Query: 141 MTPVIHCSAGNIHFFPRATLIQRKEIQLTKHNVS-GHCNRL 260
           M+P+IHCS GNI+ FP AT +Q K IQLTK+N S  H  R+
Sbjct: 1   MSPLIHCSIGNINLFPGATFVQTKRIQLTKYNASHNHAERV 41



 Score = 33.5 bits (75), Expect(2) = 2e-08
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = +2

Query: 323 AVGADVTVEETNPAVSGE 376
           AVG DVTVE+ NPAVSGE
Sbjct: 76  AVGTDVTVEDPNPAVSGE 93


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