BLASTX nr result

ID: Ophiopogon22_contig00003438 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00003438
         (3316 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020265803.1| tubby-like protein 4 isoform X2 [Asparagus o...    62   1e-06
ref|XP_020265802.1| tubby-like protein 4 isoform X1 [Asparagus o...    62   1e-06

>ref|XP_020265803.1| tubby-like protein 4 isoform X2 [Asparagus officinalis]
          Length = 263

 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = -1

Query: 2059 APATSWSILPNWSLLRRP--SNAGKCTCIIVKESVQGANGMSMSLYSLYSN 1913
            APA+SWS LPN SLL RP   + G+C+C+IVKE V+   G++MSLYSL +N
Sbjct: 10   APASSWSTLPNRSLLCRPLPMDVGRCSCVIVKERVEAVKGVTMSLYSLCTN 60


>ref|XP_020265802.1| tubby-like protein 4 isoform X1 [Asparagus officinalis]
 gb|ONK70496.1| uncharacterized protein A4U43_C05F34310 [Asparagus officinalis]
          Length = 281

 Score = 62.4 bits (150), Expect = 1e-06
 Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = -1

Query: 2059 APATSWSILPNWSLLRRP--SNAGKCTCIIVKESVQGANGMSMSLYSLYSN 1913
            APA+SWS LPN SLL RP   + G+C+C+IVKE V+   G++MSLYSL +N
Sbjct: 10   APASSWSTLPNRSLLCRPLPMDVGRCSCVIVKERVEAVKGVTMSLYSLCTN 60


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