BLASTX nr result
ID: Ophiopogon22_contig00002353
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00002353
(916 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020248415.1| HMG1/2-like protein [Asparagus officinalis] 78 7e-14
gb|AEX55234.1| HMG transcription factor [Allium sativum] 76 1e-13
gb|OMO86523.1| hypothetical protein CCACVL1_09575 [Corchorus cap... 75 8e-13
gb|KRX11980.1| High mobility group B protein 3, partial [Trichin... 75 9e-13
ref|XP_004287727.1| PREDICTED: HMG1/2-like protein [Fragaria ves... 75 1e-12
ref|XP_010253860.1| PREDICTED: high mobility group B protein 1-l... 74 2e-12
gb|OTG01823.1| putative high mobility group box domain-containin... 74 2e-12
ref|XP_013462296.1| high mobility group (HMG)-box protein [Medic... 74 2e-12
gb|AFK36584.1| unknown [Medicago truncatula] 74 2e-12
gb|OTG36286.1| putative high mobility group box domain-containin... 73 3e-12
gb|AFK40425.1| unknown [Lotus japonicus] 74 3e-12
ref|XP_022001341.1| high mobility group B protein 1-like [Helian... 74 3e-12
gb|AAT08762.1| HMG transcription factor, partial [Hyacinthus ori... 74 3e-12
ref|XP_024181476.1| HMG1/2-like protein [Rosa chinensis] >gi|135... 73 4e-12
gb|OUZ99078.1| High mobility group box domain [Macleaya cordata] 74 4e-12
emb|CAA54168.1| HMG 1 protein [Pisum sativum] 73 4e-12
ref|XP_021969176.1| high mobility group B protein 1-like [Helian... 73 4e-12
ref|XP_021906257.1| high mobility group B protein 1 [Carica papaya] 74 4e-12
ref|XP_010253859.1| PREDICTED: high mobility group B protein 1-l... 74 5e-12
ref|XP_020100146.1| high mobility group B protein 1 [Ananas como... 73 5e-12
>ref|XP_020248415.1| HMG1/2-like protein [Asparagus officinalis]
Length = 161
Score = 78.2 bits (191), Expect = 7e-14
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADG 797
VGKAAG+KWKS+S AEKAPYEA AAKRKA+YNK MVAYNK +DG
Sbjct: 76 VGKAAGDKWKSLSAAEKAPYEAKAAKRKADYNKTMVAYNKNLSDG 120
>gb|AEX55234.1| HMG transcription factor [Allium sativum]
Length = 115
Score = 76.3 bits (186), Expect = 1e-13
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADG 797
VGKAAG+KWKS++ AEKAPYEA AAKRKAEY K M AYNKK +DG
Sbjct: 33 VGKAAGDKWKSLTAAEKAPYEAKAAKRKAEYTKTMAAYNKKLSDG 77
>gb|OMO86523.1| hypothetical protein CCACVL1_09575 [Corchorus capsularis]
Length = 167
Score = 75.5 bits (184), Expect = 8e-13
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGE 800
VGKA GEKWKS+S AEKAPYEA AAKRK+EY K M AYNKKQA +
Sbjct: 87 VGKAGGEKWKSLSAAEKAPYEAKAAKRKSEYEKLMAAYNKKQASSD 132
>gb|KRX11980.1| High mobility group B protein 3, partial [Trichinella nelsoni]
Length = 143
Score = 74.7 bits (182), Expect = 9e-13
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGE 800
VGKA GEKWKS+S AEKAPY+A A KRK EYNK M YNKKQADG+
Sbjct: 63 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQADGD 108
>ref|XP_004287727.1| PREDICTED: HMG1/2-like protein [Fragaria vesca subsp. vesca]
Length = 149
Score = 74.7 bits (182), Expect = 1e-12
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGE 800
VGKA GEKWKS+S AEKAPY+A A KRK EYNK M YNKKQADG+
Sbjct: 70 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQADGD 115
>ref|XP_010253860.1| PREDICTED: high mobility group B protein 1-like isoform X2 [Nelumbo
nucifera]
Length = 166
Score = 74.3 bits (181), Expect = 2e-12
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADG 797
VGKA GEKWKS+SVAEKAPYEA AAK+K+EY K M AYNKKQ G
Sbjct: 87 VGKAGGEKWKSLSVAEKAPYEAKAAKKKSEYEKLMNAYNKKQESG 131
>gb|OTG01823.1| putative high mobility group box domain-containing protein
[Helianthus annuus]
Length = 141
Score = 73.6 bits (179), Expect = 2e-12
Identities = 35/42 (83%), Positives = 35/42 (83%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKSMS AEKAPYEA AAKRK EY K M AYNKKQ
Sbjct: 62 VGKAGGEKWKSMSAAEKAPYEAKAAKRKTEYEKVMKAYNKKQ 103
>ref|XP_013462296.1| high mobility group (HMG)-box protein [Medicago truncatula]
gb|AFK36830.1| unknown [Medicago truncatula]
gb|KEH36331.1| high mobility group (HMG)-box protein [Medicago truncatula]
Length = 155
Score = 73.9 bits (180), Expect = 2e-12
Identities = 36/47 (76%), Positives = 38/47 (80%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGEA 803
VGKAAG KWKS+S AEKAPY A A KRKAEY K M AYNKKQA+G A
Sbjct: 76 VGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAEGPA 122
>gb|AFK36584.1| unknown [Medicago truncatula]
Length = 155
Score = 73.9 bits (180), Expect = 2e-12
Identities = 36/47 (76%), Positives = 38/47 (80%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGEA 803
VGKAAG KWKS+S AEKAPY A A KRKAEY K M AYNKKQA+G A
Sbjct: 76 VGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAEGPA 122
>gb|OTG36286.1| putative high mobility group box domain-containing protein
[Helianthus annuus]
Length = 138
Score = 73.2 bits (178), Expect = 3e-12
Identities = 35/42 (83%), Positives = 35/42 (83%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKSMS AEKAPYEA AAKRK EY K M AYNKKQ
Sbjct: 59 VGKAGGEKWKSMSAAEKAPYEAKAAKRKTEYEKLMKAYNKKQ 100
>gb|AFK40425.1| unknown [Lotus japonicus]
Length = 152
Score = 73.6 bits (179), Expect = 3e-12
Identities = 36/47 (76%), Positives = 38/47 (80%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGEA 803
VGKAAG KWKSMS AEKAPY A A KRKA+Y K M AYNKKQA+G A
Sbjct: 75 VGKAAGAKWKSMSEAEKAPYVAKAEKRKADYEKTMKAYNKKQAEGPA 121
>ref|XP_022001341.1| high mobility group B protein 1-like [Helianthus annuus]
ref|XP_022001343.1| high mobility group B protein 1-like [Helianthus annuus]
ref|XP_022001344.1| high mobility group B protein 1-like [Helianthus annuus]
Length = 157
Score = 73.6 bits (179), Expect = 3e-12
Identities = 35/42 (83%), Positives = 35/42 (83%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKSMS AEKAPYEA AAKRK EY K M AYNKKQ
Sbjct: 78 VGKAGGEKWKSMSAAEKAPYEAKAAKRKTEYEKVMKAYNKKQ 119
>gb|AAT08762.1| HMG transcription factor, partial [Hyacinthus orientalis]
Length = 158
Score = 73.6 bits (179), Expect = 3e-12
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADG 797
VGKA KWK+MS AEKAP+EA AAKRKA+YNK MVAYNKKQ++G
Sbjct: 74 VGKACWGKWKTMSAAEKAPFEARAAKRKADYNKVMVAYNKKQSEG 118
>ref|XP_024181476.1| HMG1/2-like protein [Rosa chinensis]
gb|PRQ47207.1| putative chromatin remodeling & transcriptional activation HMG
family [Rosa chinensis]
Length = 149
Score = 73.2 bits (178), Expect = 4e-12
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGE 800
VGKA GEKWKS+S AEKAPY+A A KRK EYNK M YNKKQA+G+
Sbjct: 70 VGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEGD 115
>gb|OUZ99078.1| High mobility group box domain [Macleaya cordata]
Length = 168
Score = 73.6 bits (179), Expect = 4e-12
Identities = 34/42 (80%), Positives = 36/42 (85%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKS+S AEKAPYEA AAKRK+EY K M AYNKKQ
Sbjct: 87 VGKAGGEKWKSLSTAEKAPYEAKAAKRKSEYEKVMAAYNKKQ 128
>emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 73.2 bits (178), Expect = 4e-12
Identities = 35/47 (74%), Positives = 39/47 (82%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADGEA 803
VGKAAG KWKSM+ AEKAPY A A KRKAEY K+M +YNKKQA+G A
Sbjct: 76 VGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKSYNKKQAEGPA 122
>ref|XP_021969176.1| high mobility group B protein 1-like [Helianthus annuus]
ref|XP_021969185.1| high mobility group B protein 1-like [Helianthus annuus]
Length = 155
Score = 73.2 bits (178), Expect = 4e-12
Identities = 35/42 (83%), Positives = 35/42 (83%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKSMS AEKAPYEA AAKRK EY K M AYNKKQ
Sbjct: 76 VGKAGGEKWKSMSAAEKAPYEAKAAKRKTEYEKLMKAYNKKQ 117
>ref|XP_021906257.1| high mobility group B protein 1 [Carica papaya]
Length = 171
Score = 73.6 bits (179), Expect = 4e-12
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQAD 794
VGKA GEKWKSM+ AEKAPYEA AAK+KAEY K M AYNKKQ D
Sbjct: 84 VGKAGGEKWKSMTAAEKAPYEAKAAKKKAEYEKLMNAYNKKQND 127
>ref|XP_010253859.1| PREDICTED: high mobility group B protein 1-like isoform X1 [Nelumbo
nucifera]
Length = 209
Score = 74.3 bits (181), Expect = 5e-12
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQADG 797
VGKA GEKWKS+SVAEKAPYEA AAK+K+EY K M AYNKKQ G
Sbjct: 130 VGKAGGEKWKSLSVAEKAPYEAKAAKKKSEYEKLMNAYNKKQESG 174
>ref|XP_020100146.1| high mobility group B protein 1 [Ananas comosus]
Length = 164
Score = 73.2 bits (178), Expect = 5e-12
Identities = 35/42 (83%), Positives = 36/42 (85%)
Frame = +3
Query: 663 VGKAAGEKWKSMSVAEKAPYEATAAKRKAEYNKAMVAYNKKQ 788
VGKA GEKWKSMS AEKAPYEA AAKRK +Y K MVAYNKKQ
Sbjct: 87 VGKAGGEKWKSMSDAEKAPYEAKAAKRKTDYEKQMVAYNKKQ 128