BLASTX nr result

ID: Ophiopogon22_contig00002112 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon22_contig00002112
         (630 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020254981.1| uncharacterized protein LOC109831916 [Aspara...   124   4e-29
gb|ONK61705.1| uncharacterized protein A4U43_C08F32710 [Asparagu...    64   2e-08

>ref|XP_020254981.1| uncharacterized protein LOC109831916 [Asparagus officinalis]
 gb|ONK78778.1| uncharacterized protein A4U43_C02F22310 [Asparagus officinalis]
          Length = 719

 Score =  124 bits (311), Expect = 4e-29
 Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
 Frame = -1

Query: 630 TVNQPSKSD-AHSSGDANPVSEPDGKQI-NHRSKQSPETKSDQGKNQSI-PIATSKSSPD 460
           T+ QPSKSD AH S   NP  +P+ KQ+ NH +KQS E KSDQ KN S+ P  T K SP+
Sbjct: 587 TMEQPSKSDDAHVSAGGNPAIQPEPKQVKNHSTKQSSEAKSDQSKNHSLLPEGTDKLSPN 646

Query: 459 DVHATSRHSATDSKDKRNVRPESKGGSNRHNSSRAIDSLSASNKIDEPDVLTVGSMQIEI 280
           D HA SR SA  ++ KR  RPES G S+    ++            E DV TVGS++IEI
Sbjct: 647 DTHAVSRDSAKHAQGKRKGRPESVGCSDTQVPAK------------ETDVFTVGSVEIEI 694

Query: 279 TNTN-FISGTLTIGSIPIDTKGLKS 208
           T+T+  ISGTLTIGSIP DTKG KS
Sbjct: 695 TDTSRLISGTLTIGSIPCDTKGPKS 719


>gb|ONK61705.1| uncharacterized protein A4U43_C08F32710 [Asparagus officinalis]
          Length = 271

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
 Frame = -1

Query: 627 VNQPSKSDAHSSGDANPVSEPDGKQINHRSKQSPETKSDQGKNQSIPIATSKSSPDDVHA 448
           V+Q  K++     D+NP+ E D      R+KQ  E K  QG+N++     S+ SP+ V  
Sbjct: 96  VDQDLKAEDRLKDDSNPLLESD------RAKQL-EAKRGQGENRNTLKRRSRLSPNGV-- 146

Query: 447 TSRHSATDSKDKRNVRPESKGGSNRHNSSRAIDSLSASNKIDEPDVLTVGSMQIEITNTN 268
               S+  SKD +N                         KI E DV TVG ++IEIT+TN
Sbjct: 147 ---RSSDASKDAQN-----------------------QGKIGENDVFTVGPVEIEITDTN 180

Query: 267 -FISGTLTIGSIPIDTKGLKS 208
             ISGT T+GS+P+D KG K+
Sbjct: 181 RSISGTGTVGSMPVDIKGSKN 201


Top