BLASTX nr result
ID: Ophiopogon22_contig00001730
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00001730
(696 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhodo... 442 e-151
gb|ACD63081.1| RNA polymerase II largest subunit, partial [Aspar... 452 e-150
gb|ACD63086.1| RNA polymerase II largest subunit, partial [Lirio... 451 e-149
gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papav... 449 e-149
gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antir... 442 e-149
gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illic... 449 e-149
ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [As... 464 e-148
gb|ACD63083.1| RNA polymerase II largest subunit, partial [Cerat... 448 e-148
gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magno... 448 e-148
gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta ... 448 e-148
gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymph... 447 e-148
gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Ambor... 444 e-147
gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dend... 454 e-146
gb|ACD63089.1| RNA polymerase II largest subunit, partial [Perse... 442 e-146
gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japo... 436 e-146
gb|ACD63091.1| RNA polymerase II largest subunit, partial [Sarum... 442 e-146
gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicot... 442 e-146
gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja o... 441 e-146
gb|PON82670.1| DNA-directed RNA pol I, largest subunit [Trema or... 447 e-145
gb|PON49952.1| DNA-directed RNA pol I, largest subunit [Paraspon... 447 e-145
>gb|AAY89341.1| RNA polymerase II largest subunit, partial [Rhododendron
macrophyllum]
Length = 589
Score = 442 bits (1138), Expect = e-151
Identities = 221/231 (95%), Positives = 226/231 (97%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQ LVNYWLLQ+ FSIGIGDTIADAATMEKINETISKA
Sbjct: 154 GSLIHVIWEEVGPDAARKFLGHTQRLVNYWLLQSGFSIGIGDTIADAATMEKINETISKA 213
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VKDLI+ AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSL+ESNNLKAM
Sbjct: 214 KNEVKDLIRAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLAESNNLKAM 273
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 274 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 333
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 334 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 384
>gb|ACD63081.1| RNA polymerase II largest subunit, partial [Asparagus officinalis]
Length = 1009
Score = 452 bits (1162), Expect = e-150
Identities = 227/231 (98%), Positives = 229/231 (99%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIW VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA
Sbjct: 565 GSLIHVIW--VGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 622
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KNDVKDLIKLAQDKQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 623 KNDVKDLIKLAQDKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 682
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 683 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 742
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFF+AMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 743 GLTPQEFFFYAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793
>gb|ACD63086.1| RNA polymerase II largest subunit, partial [Liriodendron tulipifera]
Length = 1010
Score = 451 bits (1159), Expect = e-149
Identities = 224/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKA
Sbjct: 564 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKA 623
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 624 KNEVKELIKAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 683
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 684 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 743
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794
>gb|ACD63088.1| RNA polymerase II largest subunit, partial [Papaver orientale]
Length = 1010
Score = 449 bits (1156), Expect = e-149
Identities = 221/231 (95%), Positives = 228/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TISKA
Sbjct: 564 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKA 623
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VKDLI++AQ+K LEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 624 KNEVKDLIRMAQEKSLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 683
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 684 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 743
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794
>gb|AAY89349.1| RNA polymerase II largest subunit, partial [Antirrhinum majus]
Length = 780
Score = 442 bits (1138), Expect = e-149
Identities = 219/231 (94%), Positives = 225/231 (97%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETI A
Sbjct: 322 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETIQNA 381
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LI+ AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSE NNLKAM
Sbjct: 382 KNEVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSEHNNLKAM 441
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 442 VTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLR 501
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 502 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 552
>gb|ACD63085.1| RNA polymerase II largest subunit, partial [Illicium parviflorum]
Length = 1013
Score = 449 bits (1155), Expect = e-149
Identities = 223/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETISKA
Sbjct: 567 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKA 626
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 627 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 686
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 687 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 746
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 747 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797
>ref|XP_020250011.1| DNA-directed RNA polymerase II subunit 1 [Asparagus officinalis]
gb|ONK55404.1| uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 464 bits (1194), Expect = e-148
Identities = 231/231 (100%), Positives = 231/231 (100%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA
Sbjct: 646 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 705
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 706 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 765
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 766 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 825
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 826 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 876
>gb|ACD63083.1| RNA polymerase II largest subunit, partial [Ceratophyllum demersum]
Length = 1010
Score = 448 bits (1152), Expect = e-148
Identities = 222/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKA
Sbjct: 564 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKA 623
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 624 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 683
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 684 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 743
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794
>gb|AAQ08516.1| RNA polymerase II largest subunit, partial [Magnolia x soulangeana]
Length = 1010
Score = 448 bits (1152), Expect = e-148
Identities = 222/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKA
Sbjct: 564 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKA 623
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 624 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 683
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 684 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 743
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794
>gb|ACD63082.1| RNA polymerase II largest subunit, partial [Beta vulgaris]
Length = 1012
Score = 448 bits (1152), Expect = e-148
Identities = 222/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKA
Sbjct: 566 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKA 625
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 626 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 685
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 686 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 745
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 746 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 796
>gb|AAQ08517.1| RNA polymerase II largest subunit, partial [Nymphaea odorata]
Length = 1013
Score = 447 bits (1149), Expect = e-148
Identities = 221/231 (95%), Positives = 228/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISKA
Sbjct: 567 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISKA 626
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAM
Sbjct: 627 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQRSLSESNNLKAM 686
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 687 VTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLR 746
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 747 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797
>gb|AAQ08518.1| RNA polymerase II largest subunit, partial [Amborella trichopoda]
Length = 1013
Score = 444 bits (1142), Expect = e-147
Identities = 221/231 (95%), Positives = 226/231 (97%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIADAATMEKINETISKA
Sbjct: 567 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKA 626
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 627 KNEVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 686
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIP+GF RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 687 VTAGSKGSFINISQMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLR 746
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 747 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797
>gb|PKU64515.1| DNA-directed RNA polymerase II subunit RPB1 [Dendrobium catenatum]
Length = 1516
Score = 454 bits (1167), Expect = e-146
Identities = 224/231 (96%), Positives = 228/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIAD ATMEKINETISKA
Sbjct: 708 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADVATMEKINETISKA 767
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KNDVK+LIK AQ+KQLEPEPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 768 KNDVKELIKQAQEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 827
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGF+GRTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 828 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFLGRTLPHFTKDDYGPESRGFVENSYLR 887
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 888 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 938
>gb|ACD63089.1| RNA polymerase II largest subunit, partial [Persea americana]
Length = 1009
Score = 442 bits (1138), Expect = e-146
Identities = 220/231 (95%), Positives = 224/231 (96%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETI KA
Sbjct: 563 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETILKA 622
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
K++VKDLIK AQ+K LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 623 KSEVKDLIKAAQEKSLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 682
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGF GRTLPHFTKDDYGPE RGFVENSYLR
Sbjct: 683 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFNGRTLPHFTKDDYGPEXRGFVENSYLR 742
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 743 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793
>gb|EEE68070.1| hypothetical protein OsJ_26086 [Oryza sativa Japonica Group]
Length = 804
Score = 436 bits (1122), Expect = e-146
Identities = 217/229 (94%), Positives = 222/229 (96%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATM KINETISKA
Sbjct: 576 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKA 635
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
K+DVK+LI A DKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 636 KDDVKELIMQAHDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 695
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 696 VTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLR 755
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGT 8
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGT
Sbjct: 756 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGT 804
>gb|ACD63091.1| RNA polymerase II largest subunit, partial [Saruma henryi]
Length = 1009
Score = 442 bits (1136), Expect = e-146
Identities = 219/231 (94%), Positives = 226/231 (97%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKIN+TI+KA
Sbjct: 563 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINDTITKA 622
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK+LIK A +KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 623 KNEVKELIKAAHEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 682
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFT+DD GPESRGFVENSYLR
Sbjct: 683 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFINRTLPHFTQDDNGPESRGFVENSYLR 742
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 743 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 793
>gb|ACD63087.1| RNA polymerase II largest subunit, partial [Nicotiana tabacum]
Length = 1010
Score = 442 bits (1136), Expect = e-146
Identities = 219/231 (94%), Positives = 226/231 (97%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETIS A
Sbjct: 564 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNA 623
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
K+ VK+LIK AQ+KQLE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAM
Sbjct: 624 KSKVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAM 683
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIP+GFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 684 VTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLR 743
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 744 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 794
>gb|AAS79684.1| RNA polymerase II large subunit, partial [Thuja occidentalis]
Length = 1013
Score = 441 bits (1135), Expect = e-146
Identities = 221/231 (95%), Positives = 223/231 (96%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATME INETISKA
Sbjct: 567 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEVINETISKA 626
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KN+VK LIK AQDKQLE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 627 KNEVKQLIKAAQDKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAM 686
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGF GRTLPHFTKDD GPESRGFVENSYLR
Sbjct: 687 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFDGRTLPHFTKDDKGPESRGFVENSYLR 746
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 747 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 797
>gb|PON82670.1| DNA-directed RNA pol I, largest subunit [Trema orientalis]
Length = 1324
Score = 447 bits (1151), Expect = e-145
Identities = 222/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKA
Sbjct: 144 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKA 203
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KNDVK+LI+ AQ+K+LE EPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 204 KNDVKELIRKAQEKKLEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 263
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 264 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 323
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 324 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 374
>gb|PON49952.1| DNA-directed RNA pol I, largest subunit [Parasponia andersonii]
Length = 1324
Score = 447 bits (1151), Expect = e-145
Identities = 222/231 (96%), Positives = 227/231 (98%)
Frame = -3
Query: 694 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKA 515
GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKINETISKA
Sbjct: 144 GSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKA 203
Query: 514 KNDVKDLIKLAQDKQLEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 335
KNDVK+LI+ AQ+K+LE EPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM
Sbjct: 204 KNDVKELIRKAQEKKLEAEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAM 263
Query: 334 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLR 155
VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFI RTLPHFTKDDYGPESRGFVENSYLR
Sbjct: 264 VTAGSKGSFINISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLR 323
Query: 154 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 2
GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR
Sbjct: 324 GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVR 374