BLASTX nr result
ID: Ophiopogon22_contig00000589
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon22_contig00000589
(439 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|OAY71581.1| DNA mismatch repair protein MSH4 [Ananas comosus] 129 8e-32
ref|XP_020263535.1| DNA mismatch repair protein MSH4 isoform X4 ... 128 2e-31
ref|XP_020263534.1| DNA mismatch repair protein MSH4 isoform X3 ... 128 2e-31
ref|XP_020263533.1| DNA mismatch repair protein MSH4 isoform X2 ... 128 2e-31
ref|XP_020263532.1| DNA mismatch repair protein MSH4 isoform X1 ... 128 2e-31
gb|ONM23664.1| DNA mismatch repair protein MSH4 [Zea mays] 119 7e-31
gb|PKI41553.1| hypothetical protein CRG98_038064 [Punica granatum] 116 2e-30
gb|PKU78732.1| DNA mismatch repair protein MSH4 [Dendrobium cate... 124 2e-30
ref|XP_020684537.1| DNA mismatch repair protein MSH4 isoform X2 ... 124 3e-30
ref|XP_020684536.1| DNA mismatch repair protein MSH4 isoform X1 ... 124 3e-30
ref|XP_008796122.1| PREDICTED: DNA mismatch repair protein MSH4 ... 123 1e-29
ref|XP_023872913.1| DNA mismatch repair protein MSH4-like [Querc... 112 1e-29
ref|XP_020585217.1| DNA mismatch repair protein MSH4 isoform X5 ... 122 1e-29
ref|XP_020585216.1| DNA mismatch repair protein MSH4 isoform X4 ... 122 1e-29
ref|XP_020585215.1| DNA mismatch repair protein MSH4 isoform X3 ... 122 1e-29
ref|XP_020585214.1| DNA mismatch repair protein MSH4 isoform X2 ... 122 1e-29
ref|XP_020585212.1| DNA mismatch repair protein MSH4 isoform X1 ... 122 1e-29
gb|POF27373.1| dna mismatch repair protein msh4 [Quercus suber] 112 2e-29
gb|PKA46451.1| DNA mismatch repair protein MSH4 [Apostasia shenz... 122 2e-29
ref|XP_010933638.1| PREDICTED: DNA mismatch repair protein MSH4 ... 121 5e-29
>gb|OAY71581.1| DNA mismatch repair protein MSH4 [Ananas comosus]
Length = 969
Score = 129 bits (324), Expect = 8e-32
Identities = 63/68 (92%), Positives = 65/68 (95%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNTKT LHFYDPMVIIVPP+KLAPDGM+G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPPIKLAPDGMMGVSELVD 84
Query: 108 KHYSSNKK 85
KHYS NKK
Sbjct: 85 KHYSLNKK 92
>ref|XP_020263535.1| DNA mismatch repair protein MSH4 isoform X4 [Asparagus officinalis]
Length = 764
Score = 128 bits (321), Expect = 2e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNTKT LHFYDPMVIIVP +KLAPDGM G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPAIKLAPDGMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHYSSNKK
Sbjct: 85 KHYSSNKK 92
>ref|XP_020263534.1| DNA mismatch repair protein MSH4 isoform X3 [Asparagus officinalis]
Length = 792
Score = 128 bits (321), Expect = 2e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNTKT LHFYDPMVIIVP +KLAPDGM G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPAIKLAPDGMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHYSSNKK
Sbjct: 85 KHYSSNKK 92
>ref|XP_020263533.1| DNA mismatch repair protein MSH4 isoform X2 [Asparagus officinalis]
Length = 795
Score = 128 bits (321), Expect = 2e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNTKT LHFYDPMVIIVP +KLAPDGM G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPAIKLAPDGMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHYSSNKK
Sbjct: 85 KHYSSNKK 92
>ref|XP_020263532.1| DNA mismatch repair protein MSH4 isoform X1 [Asparagus officinalis]
gb|ONK73577.1| uncharacterized protein A4U43_C04F33090 [Asparagus officinalis]
Length = 797
Score = 128 bits (321), Expect = 2e-31
Identities = 63/68 (92%), Positives = 64/68 (94%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNTKT LHFYDPMVIIVP +KLAPDGM G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTKTLLHFYDPMVIIVPAIKLAPDGMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHYSSNKK
Sbjct: 85 KHYSSNKK 92
>gb|ONM23664.1| DNA mismatch repair protein MSH4 [Zea mays]
Length = 195
Score = 119 bits (297), Expect = 7e-31
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSY NT T LHFYDPMV+IVPP K A DGMVG SEL+D
Sbjct: 34 VGVAAFDLRSASLHLSQYIETSCSYHNTNTLLHFYDPMVVIVPPNKTAADGMVGVSELID 93
Query: 108 KHYSSNKK 85
KHY +NKK
Sbjct: 94 KHYPANKK 101
>gb|PKI41553.1| hypothetical protein CRG98_038064 [Punica granatum]
Length = 138
Score = 116 bits (290), Expect = 2e-30
Identities = 59/69 (85%), Positives = 61/69 (88%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETS SYQNTKT LHFY+PM IIVPP KLAPDGMVG SELVD
Sbjct: 21 VGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYEPMAIIVPPNKLAPDGMVGVSELVD 80
Query: 108 KHYSSNKKA 82
K Y S +KA
Sbjct: 81 KFYPSVRKA 89
>gb|PKU78732.1| DNA mismatch repair protein MSH4 [Dendrobium catenatum]
Length = 604
Score = 124 bits (312), Expect = 2e-30
Identities = 61/68 (89%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLFFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SNKK
Sbjct: 85 KHYPSNKK 92
>ref|XP_020684537.1| DNA mismatch repair protein MSH4 isoform X2 [Dendrobium catenatum]
Length = 746
Score = 124 bits (312), Expect = 3e-30
Identities = 61/68 (89%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLFFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SNKK
Sbjct: 85 KHYPSNKK 92
>ref|XP_020684536.1| DNA mismatch repair protein MSH4 isoform X1 [Dendrobium catenatum]
Length = 796
Score = 124 bits (312), Expect = 3e-30
Identities = 61/68 (89%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLFFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SNKK
Sbjct: 85 KHYPSNKK 92
>ref|XP_008796122.1| PREDICTED: DNA mismatch repair protein MSH4 [Phoenix dactylifera]
Length = 796
Score = 123 bits (308), Expect = 1e-29
Identities = 59/68 (86%), Positives = 64/68 (94%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETSCSYQNT+T LHFYDP+VIIVPP+KLAPD M G SELVD
Sbjct: 25 VGVAAFDLRSASLHLSQYIETSCSYQNTRTLLHFYDPVVIIVPPIKLAPDSMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHY+S+KK
Sbjct: 85 KHYTSHKK 92
>ref|XP_023872913.1| DNA mismatch repair protein MSH4-like [Quercus suber]
Length = 97
Score = 112 bits (281), Expect = 1e-29
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETS SYQNTKT LHFYDPM IIV P KLAPDGMVG SELVD
Sbjct: 7 VGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMAIIVTPNKLAPDGMVGVSELVD 66
Query: 108 KHYSSNKK 85
+ Y++ KK
Sbjct: 67 RFYATVKK 74
>ref|XP_020585217.1| DNA mismatch repair protein MSH4 isoform X5 [Phalaenopsis
equestris]
Length = 794
Score = 122 bits (307), Expect = 1e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLLFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>ref|XP_020585216.1| DNA mismatch repair protein MSH4 isoform X4 [Phalaenopsis
equestris]
Length = 796
Score = 122 bits (307), Expect = 1e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLLFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>ref|XP_020585215.1| DNA mismatch repair protein MSH4 isoform X3 [Phalaenopsis
equestris]
Length = 798
Score = 122 bits (307), Expect = 1e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLLFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>ref|XP_020585214.1| DNA mismatch repair protein MSH4 isoform X2 [Phalaenopsis
equestris]
Length = 828
Score = 122 bits (307), Expect = 1e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLLFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>ref|XP_020585212.1| DNA mismatch repair protein MSH4 isoform X1 [Phalaenopsis
equestris]
Length = 830
Score = 122 bits (307), Expect = 1e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT L FYDPM IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLLLFYDPMTIIVPPVKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>gb|POF27373.1| dna mismatch repair protein msh4 [Quercus suber]
Length = 111
Score = 112 bits (281), Expect = 2e-29
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASLHLSQYIETS SYQNTKT LHFYDPM IIV P KLAPDGMVG SELVD
Sbjct: 7 VGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPMAIIVTPNKLAPDGMVGVSELVD 66
Query: 108 KHYSSNKK 85
+ Y++ KK
Sbjct: 67 RFYATVKK 74
>gb|PKA46451.1| DNA mismatch repair protein MSH4 [Apostasia shenzhenica]
Length = 796
Score = 122 bits (306), Expect = 2e-29
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VG+AAFDLRSASLHLSQYIETSCSYQNTKT FYDPM+IIVPP+KLAPDGMVG SELVD
Sbjct: 25 VGMAAFDLRSASLHLSQYIETSCSYQNTKTLFLFYDPMIIIVPPIKLAPDGMVGVSELVD 84
Query: 108 KHYSSNKK 85
KHY SN+K
Sbjct: 85 KHYPSNRK 92
>ref|XP_010933638.1| PREDICTED: DNA mismatch repair protein MSH4 [Elaeis guineensis]
Length = 796
Score = 121 bits (303), Expect = 5e-29
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = -2
Query: 288 VGVAAFDLRSASLHLSQYIETSCSYQNTKTPLHFYDPMVIIVPPMKLAPDGMVGDSELVD 109
VGVAAFDLRSASL LSQYIETSCSYQNT+T LHFYDPMVIIVPP+KLAPD M G SELVD
Sbjct: 25 VGVAAFDLRSASLDLSQYIETSCSYQNTRTLLHFYDPMVIIVPPIKLAPDSMAGVSELVD 84
Query: 108 KHYSSNKK 85
KHY+S+KK
Sbjct: 85 KHYTSHKK 92