BLASTX nr result

ID: Ophiopogon21_contig00046541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00046541
         (367 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004338809.1| CBS domain containing protein [Acanthamoeba ...    58   3e-06

>ref|XP_004338809.1| CBS domain containing protein [Acanthamoeba castellanii str. Neff]
           gi|440795679|gb|ELR16796.1| CBS domain containing
           protein [Acanthamoeba castellanii str. Neff]
          Length = 348

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/103 (36%), Positives = 58/103 (56%)
 Frame = -1

Query: 367 DKQGVLVDVISIRDLRGIGSTADNFRILFLSVTKFKDECRKAFPPKYTSSKAIYVTQNDK 188
           +++G +VD IS RDLRGI   A     L+ SV  FK    +    +   +  +YV  +D 
Sbjct: 248 NEEGAVVDNISTRDLRGIKYDAKMLWRLWESVAFFKRRIVEG--DQKAPTDVVYVLNSDT 305

Query: 187 FEKVIRTMKDENIHRVFVCEMDEHGLPKPVHVVTQRDALRFLL 59
            E V++ M D +IHRVFV + + H   +PV V++Q D L+ +L
Sbjct: 306 LETVVQKMADHHIHRVFVVDDELH--KRPVRVLSQCDILQNVL 346


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