BLASTX nr result
ID: Ophiopogon21_contig00046245
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00046245
(402 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_271922.1| putative dsRNA-dependent RNA polymerase [Penici... 76 9e-12
gb|ALF46547.1| RNA-dependent RNA polymerase [Colletotrichum trun... 67 4e-09
gb|AHH35116.1| RNA directed RNA polymerase, partial [Ustilaginoi... 67 5e-09
gb|AGO04402.1| RNA-dependent RNA polymerase [Ustilaginoidea vire... 67 5e-09
ref|NP_624350.1| RNA-dependent RNA polymerase [Mycovirus FusoV] ... 64 3e-08
gb|ABV30675.1| putative RNA dependent RNA polymerase [Aspergillu... 62 1e-07
gb|AGI52210.1| RNA-dependent RNA polymerase [Verticillium dahlia... 60 5e-07
gb|AFX73023.1| RNA dependent RNA polymerase [Grapevine partitivi... 60 6e-07
ref|NP_659027.1| putative replicase [Gremmeniella abietina RNA v... 60 8e-07
ref|YP_009164038.1| RNA-dependent RNA polymerase [Verticillium d... 59 1e-06
emb|CAJ01909.1| RNA-dependent RNA polymerase [Penicillium stolon... 59 1e-06
ref|YP_052856.2| RNA-dependent RNA polymerase [Penicillium stolo... 59 1e-06
ref|YP_001686789.1| RNA-dependent RNA polymerase [Botryotinia fu... 57 4e-06
ref|NP_620301.1| RNA-dependent RNA polymerase [Discula destructi... 57 5e-06
gb|ABC86749.1| dsRNA-dependent RNA polymerase [Aspergillus ochra... 57 5e-06
gb|AII16004.1| RNA-dependent RNA polymerase [Gremmeniella abieti... 57 7e-06
ref|YP_138540.1| putative RNA-dependent RNA polymerase [Gremmeni... 57 7e-06
>ref|YP_271922.1| putative dsRNA-dependent RNA polymerase [Penicillium stoloniferum
virus F] gi|53854828|gb|AAU95758.1| putative
dsRNA-dependent RNA polymerase [Penicillium stoloniferum
virus F]
Length = 538
Score = 76.3 bits (186), Expect = 9e-12
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = -1
Query: 402 NWITQRSILIYMKVDFERQSILGDDNSFFSRYLPPDFKEV-YSYNLKFFFGLDSHPAKTD 226
N++ +++ Y + R +LGDD+SF + V S FG K
Sbjct: 352 NYLAVKTLDNYFSWNARRFRVLGDDSSFLIPFGRSKVDGVEISEKAWETFGFTLKLKKLR 411
Query: 225 IFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDL 46
I + ++RKFLGY+ + R T +W + VLYPE+ V+ L S +R+FA+ ++GG ND+
Sbjct: 412 IANKQQDRKFLGYQCNAFRYERSTTEWLSMVLYPERDVEFLEQSASRVFAFYLLGGCNDV 471
Query: 45 KFYSFFEYFIGTY 7
+ FF ++G Y
Sbjct: 472 TYCEFFHDYLGRY 484
>gb|ALF46547.1| RNA-dependent RNA polymerase [Colletotrichum truncatum partitivirus
1]
Length = 539
Score = 67.4 bits (163), Expect = 4e-09
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Frame = -1
Query: 402 NWITQRSILIYMKVDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFF-FGLDSHPAKTD 226
N+I + KV+ +LGDD++F S D + S + G+ P K +
Sbjct: 367 NYILIEYLADCQKVEIRNLRVLGDDSAFRSG----DQFSLESAKIDCIPTGMIIKPEKCE 422
Query: 225 IFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDL 46
++ + K LG K LH R TE+WF LYPE V +L +SFTR+ + G + D
Sbjct: 423 RTKDPSDFKLLGTKYHDLHPFRDTEEWFKLALYPESSVHTLDISFTRLIGLWLGGAMWDR 482
Query: 45 KFYSFFEYFIGTY 7
KF F ++F +Y
Sbjct: 483 KFCEFMDFFQTSY 495
>gb|AHH35116.1| RNA directed RNA polymerase, partial [Ustilaginoidea virens
partitivirus]
Length = 347
Score = 67.0 bits (162), Expect = 5e-09
Identities = 41/119 (34%), Positives = 59/119 (49%)
Frame = -1
Query: 363 VDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGYK 184
V+ +LGDD++F S F + G+ P K + + + K LG K
Sbjct: 188 VEIRNLRVLGDDSAFRSSN---QFDLEVAKQDCVPTGMVIKPEKCERSEDPSDFKLLGTK 244
Query: 183 VSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
G H+ RPTE+WF VLYPE V SL +SFTR+ + G + D KF F +++ Y
Sbjct: 245 YRGGHVFRPTEEWFKLVLYPESSVLSLDMSFTRLIGLWIGGAMWDRKFCEFMDFYQSAY 303
>gb|AGO04402.1| RNA-dependent RNA polymerase [Ustilaginoidea virens partitivirus]
Length = 539
Score = 67.0 bits (162), Expect = 5e-09
Identities = 41/119 (34%), Positives = 59/119 (49%)
Frame = -1
Query: 363 VDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGYK 184
V+ +LGDD++F S F + G+ P K + + + K LG K
Sbjct: 380 VEIRNLRVLGDDSAFRSSN---QFDLEVAKQDCVPTGMVIKPEKCERSEDPSDFKLLGTK 436
Query: 183 VSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
G H+ RPTE+WF VLYPE V SL +SFTR+ + G + D KF F +++ Y
Sbjct: 437 YRGGHVFRPTEEWFKLVLYPESSVLSLDMSFTRLIGLWIGGAMWDRKFCEFMDFYQSAY 495
>ref|NP_624350.1| RNA-dependent RNA polymerase [Mycovirus FusoV]
gi|893388|dbj|BAA09520.1| RNA-dependent RNA polymerase
[Mycovirus FusoV]
Length = 519
Score = 64.3 bits (155), Expect = 3e-08
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Frame = -1
Query: 402 NWITQRSILIYMKVDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKF----FFGLDSHPA 235
NWI + + + V+ + +LGDD++F + E ++ G+D
Sbjct: 348 NWILVKYLSLCQGVNAKNLRVLGDDSAFMAA-------ETMDLSVAAEDAAAVGMDLSDE 400
Query: 234 KTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGI 55
K+ + K LG + H R TE+WF LYPE V ++ S TR+ + G +
Sbjct: 401 KSISVEDATELKLLGVRYRDGHAFRETEEWFKLALYPEGDVPDIATSLTRLVGLWIGGAM 460
Query: 54 NDLKFYSFFEYFIGTY 7
D KF F EYF G Y
Sbjct: 461 WDTKFSRFMEYFQGCY 476
>gb|ABV30675.1| putative RNA dependent RNA polymerase [Aspergillus ochraceous
virus]
Length = 539
Score = 62.4 bits (150), Expect = 1e-07
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Frame = -1
Query: 402 NWITQRSILIYMKVDFERQSILGDDNSFFS------RYLPPDFKEVYSYNLKFFFGLDSH 241
N I + I + +V+ + +LGDD++F S D K+V + H
Sbjct: 367 NDILVQYICLCQQVEPKDLRVLGDDSAFRSCADLDLGQAERDAKDV---------NMVLH 417
Query: 240 PAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVG 61
P K D+ + K LG H R T++WF VLYPE V SL VSF+R+ + G
Sbjct: 418 PEKCDVKTDPTKMKLLGTTYRNGHAHRDTDEWFKLVLYPESSVRSLEVSFSRLIGLWIGG 477
Query: 60 GINDLKFYSFFEYFIGTYQ 4
+ D F F EY+ +Q
Sbjct: 478 AMFDSAFCRFMEYYQTCFQ 496
>gb|AGI52210.1| RNA-dependent RNA polymerase [Verticillium dahliae partitivirus 1]
Length = 539
Score = 60.5 bits (145), Expect = 5e-07
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = -1
Query: 366 KVDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGY 187
+V+ +LGDD++F S F + G+ P K + ++ K LG
Sbjct: 379 RVEIRNLRVLGDDSAFCSG---GQFDLELAKGDCENTGMVIKPEKCERTKDPGEFKLLGT 435
Query: 186 KVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
G H+ R TE+WF LYPE V +L +SFTR+ + G + D KF + ++F +Y
Sbjct: 436 TYRGGHVFRDTEEWFKLALYPESSVLTLDISFTRLIGLWLGGAMWDKKFCEYMDFFQSSY 495
>gb|AFX73023.1| RNA dependent RNA polymerase [Grapevine partitivirus]
Length = 457
Score = 60.1 bits (144), Expect = 6e-07
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDF---------ERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ V + +LGDD++F + +F +
Sbjct: 274 SWFTQMVDSVVNYILVSYLTTCQDAEIRNLKVLGDDSAFRTG---SEFDLARAQEDADVT 330
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
G+ P K + + K LG G RPTE+WF LYPE V SL VS TR+
Sbjct: 331 GMVLKPEKCEKTTDPVEFKLLGTTYRGGRPHRPTEEWFKLALYPEGGVSSLDVSLTRLVG 390
Query: 75 YLMVGGINDLKFYSFFEYFIGTY 7
+ G ++DL F +F YF +Y
Sbjct: 391 LWIGGAMHDLHFCAFMHYFQQSY 413
>ref|NP_659027.1| putative replicase [Gremmeniella abietina RNA virus MS1]
gi|20177188|gb|AAM12240.1| putative replicase
[Gremmeniella abietina RNA virus MS1]
Length = 539
Score = 59.7 bits (143), Expect = 8e-07
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDFERQS---------ILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ V++ + +LGDD++F S P +F + +
Sbjct: 357 SWWTQMVDSVVNYILVEYLTECQGVEARGLRVLGDDSAFRS---PVEFSLEQAQSDCEPT 413
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
G+ P K + + + K LG G H R T +WF LYPE +V +L VS +R+
Sbjct: 414 GMILKPEKCEKTEDPSDFKLLGTTYRGCHPHRDTNEWFKLALYPESRVGNLEVSLSRLVG 473
Query: 75 YLMVGGINDLKFYSFFEYFIGTY 7
+ G + D +F S+ +YF +Y
Sbjct: 474 LWIGGAMWDKEFCSYMDYFQSSY 496
>ref|YP_009164038.1| RNA-dependent RNA polymerase [Verticillium dahliae partitivirus 1]
gi|682122638|gb|AIN34927.1| RNA-dependent RNA polymerase
[Verticillium dahliae partitivirus 1]
Length = 539
Score = 59.3 bits (142), Expect = 1e-06
Identities = 36/120 (30%), Positives = 58/120 (48%)
Frame = -1
Query: 366 KVDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGY 187
+V+ +LGDD++F S F + G+ P K + ++ K LG
Sbjct: 379 RVEIRNLRVLGDDSAFCSG---DQFDLELAKGDCEPTGMVIKPEKCERTKDPGEFKLLGT 435
Query: 186 KVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
G H+ R TE+WF LYPE V +L +SFTR+ + G + D +F + ++F +Y
Sbjct: 436 TYRGGHVFRDTEEWFKLALYPESSVLTLDISFTRLIGLWLGGAMWDKRFCEYMDFFQSSY 495
>emb|CAJ01909.1| RNA-dependent RNA polymerase [Penicillium stoloniferum virus S]
Length = 539
Score = 59.3 bits (142), Expect = 1e-06
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDF---------ERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ VD+ +LGDD++F R P ++ S++ +
Sbjct: 356 SWFTQMIDSVVNYILVDYLAACQQCEIRALRVLGDDSAF--RSCDPFSLDLASHDAECV- 412
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
+ HP K + ++ K LG R T +WF LYPE V SL VSFTR+
Sbjct: 413 NMILHPEKCEKTKDPTAFKLLGTTYRNGRPHRETNEWFKLALYPESVVPSLQVSFTRLIG 472
Query: 75 YLMVGGINDLKFYSFFEYF 19
+ G + D +F F EY+
Sbjct: 473 LWIGGAMFDSRFCQFMEYY 491
>ref|YP_052856.2| RNA-dependent RNA polymerase [Penicillium stoloniferum virus S]
gi|94411350|gb|AAN86834.2| RNA-dependent RNA polymerase
[Penicillium stoloniferum virus S]
Length = 539
Score = 59.3 bits (142), Expect = 1e-06
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDF---------ERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ VD+ +LGDD++F R P ++ S++ +
Sbjct: 356 SWFTQMIDSVVNYILVDYLAACQQCEIRALRVLGDDSAF--RSCDPFSLDLASHDAECV- 412
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
+ HP K + ++ K LG R T +WF LYPE V SL VSFTR+
Sbjct: 413 NMILHPEKCEKTKDPTAFKLLGTTYRNGRPHRETNEWFKLALYPESVVPSLQVSFTRLIG 472
Query: 75 YLMVGGINDLKFYSFFEYF 19
+ G + D +F F EY+
Sbjct: 473 LWIGGAMFDSRFCQFMEYY 491
>ref|YP_001686789.1| RNA-dependent RNA polymerase [Botryotinia fuckeliana partitivirus
1] gi|133919435|emb|CAM33266.1| RNA-dependent RNA
polymerase [Botryotinia fuckeliana partitivirus 1]
Length = 540
Score = 57.4 bits (137), Expect = 4e-06
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -1
Query: 363 VDFERQSILGDDNSFFSRYLPPDFK-EVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGY 187
V+ +LGDD++F S +F+ E + K G+ P K + + + K LG
Sbjct: 381 VEIRNLKVLGDDSAFRSS---DEFQLETAKLDCKPT-GMVIKPEKCEKTADPADFKLLGT 436
Query: 186 KVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
K H+ R T++WF LYPE V +L V+FTR+ + G + D +F + ++F +Y
Sbjct: 437 KYRSGHVHRDTDEWFKLALYPESSVFTLDVAFTRLIGLWLGGAMWDKRFCEYMDFFQSSY 496
>ref|NP_620301.1| RNA-dependent RNA polymerase [Discula destructiva virus 2]
gi|14334368|gb|AAK59379.1| RNA-dependent RNA polymerase
[Discula destructiva virus 2]
Length = 539
Score = 57.0 bits (136), Expect = 5e-06
Identities = 37/119 (31%), Positives = 57/119 (47%)
Frame = -1
Query: 363 VDFERQSILGDDNSFFSRYLPPDFKEVYSYNLKFFFGLDSHPAKTDIFREVENRKFLGYK 184
V + +LGDD++F S F + + G+ P K + + K LG K
Sbjct: 380 VKIPKPEVLGDDSAFRSN---DQFDLEVAKDDCVPTGMVIRPEKCEKTEDPAEFKLLGTK 436
Query: 183 VSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGINDLKFYSFFEYFIGTY 7
+ R T++WF+ LYPE V SL VSFTR+ + G + D +F F +Y+ +Y
Sbjct: 437 YRSGRVHRSTDEWFSLALYPESSVLSLDVSFTRLVGLWLGGAMWDKQFCEFMDYYQTSY 495
>gb|ABC86749.1| dsRNA-dependent RNA polymerase [Aspergillus ochraceous virus]
Length = 539
Score = 57.0 bits (136), Expect = 5e-06
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Frame = -1
Query: 402 NWITQRSILIYMKVDFERQSILGDDNSFFS---RYLPPDFKEVYSYNLKFFFGLDSHPAK 232
N I + I + +++ +LGDD++F S L ++ N+ HP K
Sbjct: 367 NDILVQYICLCQEIEPRDLRVLGDDSAFRSCAELVLVQAERDAKDVNMVL------HPEK 420
Query: 231 TDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFAYLMVGGIN 52
D+ + K LG R T++WF VLYPE V ++ VSF+R+ + G +
Sbjct: 421 CDVKTDPTKMKLLGTTYRNGRAHRDTDEWFKLVLYPESSVRTIEVSFSRLIGLWIGGAMF 480
Query: 51 DLKFYSFFEYFIGTYQ 4
D F F EY+ +Q
Sbjct: 481 DSAFCRFMEYYQTCFQ 496
>gb|AII16004.1| RNA-dependent RNA polymerase [Gremmeniella abietina RNA virus MS1]
Length = 539
Score = 56.6 bits (135), Expect = 7e-06
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDFERQS---------ILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ V++ + +LGDD++F S +F + +
Sbjct: 357 SWWTQMVDSVVNYILVEYLTECQGVEARGLRVLGDDSAFRSAV---EFSLEKAQSDCEPT 413
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
G+ P K + + + K LG G H R T +WF LYPE +V +L VS +R+
Sbjct: 414 GMILKPEKCEKTEDPSDFKLLGTTYRGCHPHRDTNEWFKLALYPESRVGNLEVSLSRLVG 473
Query: 75 YLMVGGINDLKFYSFFEYFIGTY 7
+ G + D +F S+ +YF +Y
Sbjct: 474 LWIGGAMWDKEFCSYMDYFQSSY 496
>ref|YP_138540.1| putative RNA-dependent RNA polymerase [Gremmeniella abietina RNA
virus MS2] gi|49036578|gb|AAT48886.1| putative
RNA-dependent RNA polymerase [Gremmeniella abietina RNA
virus MS2]
Length = 539
Score = 56.6 bits (135), Expect = 7e-06
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Frame = -1
Query: 402 NWITQR--SILIYMKVDFERQS---------ILGDDNSFFSRYLPPDFKEVYSYNLKFFF 256
+W TQ S++ Y+ V++ + +LGDD++F S P +F + +
Sbjct: 357 SWWTQMVDSVVNYILVEYLTECQGVEARGLRVLGDDSAFRS---PVEFSLEQAQSDCEPT 413
Query: 255 GLDSHPAKTDIFREVENRKFLGYKVSGLHLIRPTEDWFAHVLYPEKQVDSLSVSFTRMFA 76
G+ P K + + + K LG H R T +WF LYPE +V +L VS +R+
Sbjct: 414 GMILKPEKCEKTEDPSDFKLLGTTYRECHPHRDTNEWFKLALYPESRVGNLEVSLSRLVG 473
Query: 75 YLMVGGINDLKFYSFFEYFIGTY 7
+ G + D +F S+ +YF +Y
Sbjct: 474 LWIGGAMWDKEFCSYMDYFQSSY 496