BLASTX nr result

ID: Ophiopogon21_contig00044087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00044087
         (567 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX58156.1| Yra1p [Rhizophagus irregularis DAOM 197198w]           243   6e-62
gb|EXX58154.1| Yra1p [Rhizophagus irregularis DAOM 197198w]           243   6e-62
gb|ESA17492.1| hypothetical protein GLOINDRAFT_345065 [Rhizophag...   243   6e-62
gb|EXX58155.1| Yra1p [Rhizophagus irregularis DAOM 197198w]           122   1e-25
gb|KNC99701.1| hypothetical protein SPPG_05081 [Spizellomyces pu...    98   2e-18
gb|KIY47361.1| hypothetical protein FISHEDRAFT_66083 [Fistulina ...    95   3e-17
ref|XP_007367519.1| hypothetical protein DICSQDRAFT_88921 [Dicho...    93   1e-16
ref|XP_006279678.1| hypothetical protein CARUB_v10026991mg [Caps...    92   2e-16
ref|XP_007340539.1| hypothetical protein AURDEDRAFT_111799 [Auri...    92   2e-16
ref|XP_013618951.1| PREDICTED: THO complex subunit 4A-like isofo...    91   3e-16
ref|XP_013618950.1| PREDICTED: THO complex subunit 4A-like isofo...    91   3e-16
ref|XP_009550091.1| hypothetical protein HETIRDRAFT_411258 [Hete...    91   3e-16
ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arab...    91   3e-16
ref|XP_013612289.1| PREDICTED: THO complex subunit 4A-like [Bras...    90   8e-16
ref|XP_010922376.1| PREDICTED: THO complex subunit 4A-like [Elae...    90   8e-16
ref|XP_009120514.1| PREDICTED: THO complex subunit 4A-like [Bras...    90   8e-16
ref|XP_013714483.1| PREDICTED: THO complex subunit 4A-like [Bras...    90   8e-16
ref|XP_013712170.1| PREDICTED: THO complex subunit 4A-like [Bras...    90   8e-16
ref|NP_001065229.1| Os12g0100100 [Oryza sativa Japonica Group] g...    90   8e-16
ref|XP_007869483.1| RNA-binding domain-containing protein [Gloeo...    90   8e-16

>gb|EXX58156.1| Yra1p [Rhizophagus irregularis DAOM 197198w]
          Length = 164

 Score =  243 bits (619), Expect = 6e-62
 Identities = 131/151 (86%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSN-AAT 279
           MSAGLDMSLDEIIAKK               GI KRSGGPVRNPRSSQVRPRPYSN AAT
Sbjct: 1   MSAGLDMSLDEIIAKKRPSRGARTGGPTRTGGIAKRSGGPVRNPRSSQVRPRPYSNTAAT 60

Query: 278 TSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 99
            S NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA
Sbjct: 61  ASSNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 120

Query: 98  RKNDAVRSVDKLRNITLDGREMKIEIVVAPN 6
           RKNDAVRSV+KLRNITLDGREMKIEIVVAPN
Sbjct: 121 RKNDAVRSVEKLRNITLDGREMKIEIVVAPN 151


>gb|EXX58154.1| Yra1p [Rhizophagus irregularis DAOM 197198w]
          Length = 218

 Score =  243 bits (619), Expect = 6e-62
 Identities = 131/151 (86%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSN-AAT 279
           MSAGLDMSLDEIIAKK               GI KRSGGPVRNPRSSQVRPRPYSN AAT
Sbjct: 1   MSAGLDMSLDEIIAKKRPSRGARTGGPTRTGGIAKRSGGPVRNPRSSQVRPRPYSNTAAT 60

Query: 278 TSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 99
            S NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA
Sbjct: 61  ASSNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 120

Query: 98  RKNDAVRSVDKLRNITLDGREMKIEIVVAPN 6
           RKNDAVRSV+KLRNITLDGREMKIEIVVAPN
Sbjct: 121 RKNDAVRSVEKLRNITLDGREMKIEIVVAPN 151


>gb|ESA17492.1| hypothetical protein GLOINDRAFT_345065 [Rhizophagus irregularis
           DAOM 181602] gi|595449369|gb|EXX58153.1| Yra1p
           [Rhizophagus irregularis DAOM 197198w]
          Length = 231

 Score =  243 bits (619), Expect = 6e-62
 Identities = 131/151 (86%), Positives = 132/151 (87%), Gaps = 1/151 (0%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSN-AAT 279
           MSAGLDMSLDEIIAKK               GI KRSGGPVRNPRSSQVRPRPYSN AAT
Sbjct: 1   MSAGLDMSLDEIIAKKRPSRGARTGGPTRTGGIAKRSGGPVRNPRSSQVRPRPYSNTAAT 60

Query: 278 TSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 99
            S NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA
Sbjct: 61  ASSNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA 120

Query: 98  RKNDAVRSVDKLRNITLDGREMKIEIVVAPN 6
           RKNDAVRSV+KLRNITLDGREMKIEIVVAPN
Sbjct: 121 RKNDAVRSVEKLRNITLDGREMKIEIVVAPN 151


>gb|EXX58155.1| Yra1p [Rhizophagus irregularis DAOM 197198w]
          Length = 175

 Score =  122 bits (306), Expect = 1e-25
 Identities = 62/63 (98%), Positives = 63/63 (100%)
 Frame = -2

Query: 194 ELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIVV 15
           ELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKNDAVRSV+KLRNITLDGREMKIEIVV
Sbjct: 33  ELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKNDAVRSVEKLRNITLDGREMKIEIVV 92

Query: 14  APN 6
           APN
Sbjct: 93  APN 95


>gb|KNC99701.1| hypothetical protein SPPG_05081 [Spizellomyces punctatus DAOM
           BR117]
          Length = 236

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSS--QVRPRPYSNAATTSP 270
           LDMSLD+II K                      GG +R  R S    R RPY+N++   P
Sbjct: 8   LDMSLDDIIVKNKPQRGKRGG-----------GGGAMRTSRRSGRDDRARPYANSSLR-P 55

Query: 269 NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKN 90
               +   KI+VSNLA  VT+ D+ ELFS  IGPVR   LN+D  GRSKG A+V+F+R  
Sbjct: 56  TAATNISDKIVVSNLAKSVTQNDVHELFS-QIGPVRSAQLNYDAQGRSKGVANVIFSRPK 114

Query: 89  DAVRSVDKLRNITLDGREMKIEIVVAPNA 3
           DA  ++ +  N TLD + MKIE++V  +A
Sbjct: 115 DAQAAIREYHNRTLDNKPMKIELIVRADA 143


>gb|KIY47361.1| hypothetical protein FISHEDRAFT_66083 [Fistulina hepatica ATCC
           64428]
          Length = 212

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 61/149 (40%), Positives = 86/149 (57%), Gaps = 3/149 (2%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSNAA--TTSP 270
           +D SLDE+IA K                  +R+G        S  R RP S+AA  T +P
Sbjct: 3   MDKSLDELIASKPKGRRG------------RRAGAAKAQVLGSGPR-RPASSAAKGTAAP 49

Query: 269 NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKN 90
             +A P  KI+VSNL   V E  + ELF++ +GP+R+V L++D +GRSKG A+V F+RK 
Sbjct: 50  ASSAQPTDKIIVSNLPTDVNETQIKELFASTVGPLREVTLHYDSNGRSKGVAAVHFSRKG 109

Query: 89  DAVRSVDKLRNITLDG-REMKIEIVVAPN 6
           D  ++ ++  N  +DG R MKIEIVV P+
Sbjct: 110 DGSKAFEQYNNRLIDGKRPMKIEIVVDPS 138


>ref|XP_007367519.1| hypothetical protein DICSQDRAFT_88921 [Dichomitus squalens LYAD-421
           SS1] gi|395327407|gb|EJF59807.1| hypothetical protein
           DICSQDRAFT_88921 [Dichomitus squalens LYAD-421 SS1]
          Length = 217

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 61/159 (38%), Positives = 81/159 (50%), Gaps = 13/159 (8%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQV------------RPR 300
           +D SLDEIIA +                   R   P RN   +QV            R  
Sbjct: 1   MDKSLDEIIATRPKGI---------------RKSNPRRNSGKAQVLGNSNPAPATRARAV 45

Query: 299 PYSNAATTSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKG 120
           P SN A T P   + P  KI+VSNL   V EA + ELF+  +GP++ V L++D  GRSKG
Sbjct: 46  PASNGAKTVPPTASQPADKIIVSNLPPDVNEAQVKELFTATVGPLKDVTLHYDSQGRSKG 105

Query: 119 TASVVFARKNDAVRSVDKLRNITLDG-REMKIEIVVAPN 6
            A+V F+R+ D  ++  +  N  +DG R MKIEIVV P+
Sbjct: 106 VAAVHFSRRGDGTKAFQQYNNRLIDGKRPMKIEIVVDPS 144


>ref|XP_006279678.1| hypothetical protein CARUB_v10026991mg [Capsella rubella]
           gi|482548382|gb|EOA12576.1| hypothetical protein
           CARUB_v10026991mg [Capsella rubella]
          Length = 252

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 62/169 (36%), Positives = 85/169 (50%), Gaps = 23/169 (13%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVR--NPRSSQVRPRPYSNAA 282
           MS GLDMSLD++IAK                  +    GP R  NP     R  PY +A 
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGGAGPARGSGSGSGSGPGPTRRNNPNRKSNRSAPYQSAK 60

Query: 281 TTS----------------PNLNASPEG-----KILVSNLAYKVTEADLWELFSTMIGPV 165
                              P  + S  G     K+ +SNL Y V   D+ ELF+  +G +
Sbjct: 61  APESSWGHDMFSDSAEAFPPRSSRSSAGIETGTKLYISNLDYGVMNDDIKELFAE-VGEL 119

Query: 164 RQVNLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
           ++  ++FD+SGRSKGTA VVF+R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 120 KRYTVHFDRSGRSKGTAEVVFSRRGDALAAVKKYNDVQLDGKPMKIEIV 168


>ref|XP_007340539.1| hypothetical protein AURDEDRAFT_111799 [Auricularia subglabra
           TFB-10046 SS5] gi|393243627|gb|EJD51141.1| hypothetical
           protein AURDEDRAFT_111799 [Auricularia subglabra
           TFB-10046 SS5]
          Length = 257

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIA-KKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSN--- 288
           MS+ LD SLD++I  KK               G T    G     R S + P    N   
Sbjct: 1   MSSALDKSLDDMIVDKKRNRAPRRGRSTRGSTGTTGAVAGATARTRYSGILPSSNGNIAA 60

Query: 287 --AATTSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTA 114
             AA  +   +++   KI+VSNL   V EA + ELFST +GP+++VNL+FDQ G+SKG A
Sbjct: 61  KQAAAAAQVQSSAGAEKIIVSNLPPDVNEAQIKELFSTTVGPLKEVNLHFDQHGKSKGVA 120

Query: 113 SVVFARKNDAVRSVDKLRNITLDG-REMKIEIVVAP 9
            V F+RK D  ++ ++  +  +DG R MKIEI+V P
Sbjct: 121 HVQFSRKGDGTKAYNQYNHRLIDGKRPMKIEIIVDP 156


>ref|XP_013618951.1| PREDICTED: THO complex subunit 4A-like isoform X2 [Brassica
           oleracea var. oleracea]
          Length = 226

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSG---GPVR--NPRSSQVRPRPYS 291
           M+ GLDMSLD++IAK                  ++ SG   GP R  NP     R  PY 
Sbjct: 1   MATGLDMSLDDVIAKNRK---------------SRGSGSGPGPTRRNNPNRKSNRSAPYQ 45

Query: 290 NAA--------------TTSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVN 153
           +A               +T  +       K+ +SNL Y V   D+ ELFS  +G +++  
Sbjct: 46  SAKAPESTWEHEAFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFSE-VGELKRYT 104

Query: 152 LNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
           ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 105 VHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 149


>ref|XP_013618950.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Brassica
           oleracea var. oleracea]
          Length = 227

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 61/165 (36%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSG---GPVR--NPRSSQVRPRPYS 291
           M+ GLDMSLD++IAK                  ++ SG   GP R  NP     R  PY 
Sbjct: 1   MATGLDMSLDDVIAKNRK---------------SRGSGSGPGPTRRNNPNRKSNRSAPYQ 45

Query: 290 NAA--------------TTSPNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVN 153
           +A               +T  +       K+ +SNL Y V   D+ ELFS  +G +++  
Sbjct: 46  SAKAPESTWEHEAFPSRSTRSSAGIETGTKLYISNLDYGVMNDDIKELFSE-VGELKRYT 104

Query: 152 LNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
           ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 105 VHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 149


>ref|XP_009550091.1| hypothetical protein HETIRDRAFT_411258 [Heterobasidion irregulare
           TC 32-1] gi|575062471|gb|ETW78089.1| hypothetical
           protein HETIRDRAFT_411258 [Heterobasidion irregulare TC
           32-1]
          Length = 226

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 3/149 (2%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSNAAT-TSP- 270
           +D SLDEII+ +                +   +G     P +++ R  P++ AA  T P 
Sbjct: 1   MDKSLDEIISTRPKAIRRTAVRKTARQQLLGSAG----TPPAARARIVPHAAAANGTKPV 56

Query: 269 NLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKN 90
           ++   P  KI+VSNL   V E  + ELF T +GP+R+V L++D +GRSKG ASV F+RK 
Sbjct: 57  SIATQPADKIIVSNLPQDVNEVQIKELFQTTVGPLREVTLHYDSAGRSKGVASVHFSRKG 116

Query: 89  DAVRSVDKLRNITLDG-REMKIEIVVAPN 6
           D  ++  +  N  +DG R MKIE+VV P+
Sbjct: 117 DGSKAYQQYNNRLIDGKRPMKIEVVVDPS 145


>ref|XP_002864660.1| hypothetical protein ARALYDRAFT_496130 [Arabidopsis lyrata subsp.
           lyrata] gi|297310495|gb|EFH40919.1| hypothetical protein
           ARALYDRAFT_496130 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSNAATT 276
           MS GLDMSLD++IAK                G T+R+     NP     R  PY +A   
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGGAGPARGTGPGPTRRN-----NPNRKSTRSAPYQSAKAP 55

Query: 275 S----------------PNLNASPEG--KILVSNLAYKVTEADLWELFSTMIGPVRQVNL 150
                            P  +A  E   K+ +SNL Y V   D+ ELF+  +G +++  +
Sbjct: 56  ESTWGHDMFSDRSEDFPPRSSAGIETGTKLYISNLDYGVMNEDIKELFAE-VGELKRYTV 114

Query: 149 NFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
           +FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 115 HFDRSGRSKGTAEVVYSRRGDALAAVKKYNDVQLDGKPMKIEIV 158


>ref|XP_013612289.1| PREDICTED: THO complex subunit 4A-like [Brassica oleracea var.
           oleracea]
          Length = 230

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVR--NPRSSQVRPRPYSNAA 282
           MS GLDMSLD++IAK                  +    GP+R  NP     R  PY +A 
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGSGPARG------SGSGSGPIRRNNPNRKSNRSAPYQSAK 54

Query: 281 TT---------SPNLNASPEG---------KILVSNLAYKVTEADLWELFSTMIGPVRQV 156
                      S    A P           K+ +SNL Y V   D+ ELF+  +G +++ 
Sbjct: 55  APESTWEHDMYSDGSQAFPSRSSSGIETGTKLYISNLDYGVMNDDIKELFAE-VGELKRY 113

Query: 155 NLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
            ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 114 TVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 159


>ref|XP_010922376.1| PREDICTED: THO complex subunit 4A-like [Elaeis guineensis]
          Length = 245

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 63/167 (37%), Positives = 91/167 (54%), Gaps = 21/167 (12%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRN-PRSSQVRPRPYSNA-- 285
           M++ LDMSLD++I KK               G  + SGGP R  P  S  RP PYS A  
Sbjct: 1   MTSSLDMSLDDLI-KKNKKPATGGSSSSSGRGRGRGSGGPARRFPNRSGNRPTPYSMAKA 59

Query: 284 -----------------ATTSPNLNASPEG-KILVSNLAYKVTEADLWELFSTMIGPVRQ 159
                            +  +  ++A   G K+ +SNL Y V+  D+ ELFS  +G +++
Sbjct: 60  PDSAWQHDMYANQTGGYSAPAARVSAIETGTKLYISNLDYGVSTEDIKELFSE-VGDLKR 118

Query: 158 VNLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
             +++D+SGRSKGTA V F+R+ DA+ +V +  N+ LDG+ MKIEIV
Sbjct: 119 YAIHYDRSGRSKGTAEVFFSRRVDALAAVKRYNNVQLDGKPMKIEIV 165


>ref|XP_009120514.1| PREDICTED: THO complex subunit 4A-like [Brassica rapa]
          Length = 238

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVR--NPRSSQVRPRPYSNAA 282
           MS GLDMSLD++IAK                  +    GP+R  NP     R  PY +A 
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGSGPARG------SGSGSGPIRRNNPNRKSNRSAPYQSAK 54

Query: 281 TT---------SPNLNASPEG---------KILVSNLAYKVTEADLWELFSTMIGPVRQV 156
                      S    A P           K+ +SNL Y V   D+ ELF+  +G +++ 
Sbjct: 55  APESTWEHDMYSDGSQAFPSRSSAGIETGTKLYISNLDYGVMNDDIKELFAE-VGELKRY 113

Query: 155 NLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
            ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 114 TVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 159


>ref|XP_013714483.1| PREDICTED: THO complex subunit 4A-like [Brassica napus]
           gi|674953181|emb|CDX80213.1| BnaC09g35290D [Brassica
           napus]
          Length = 235

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVR--NPRSSQVRPRPYSNAA 282
           MS GLDMSLD++IAK                  +    GP+R  NP     R  PY +A 
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGSGPARG------SGSGSGPIRRNNPNRKSNRSAPYQSAK 54

Query: 281 TT---------SPNLNASPEG---------KILVSNLAYKVTEADLWELFSTMIGPVRQV 156
                      S    A P           K+ +SNL Y V   D+ ELF+  +G +++ 
Sbjct: 55  APESTWEHDMYSDGSQAFPSRSSSGIETGTKLYISNLDYGVMNDDIKELFAE-VGELKRY 113

Query: 155 NLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
            ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 114 TVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 159


>ref|XP_013712170.1| PREDICTED: THO complex subunit 4A-like [Brassica napus]
           gi|674901453|emb|CDY31583.1| BnaA10g12880D [Brassica
           napus]
          Length = 239

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
 Frame = -2

Query: 455 MSAGLDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVR--NPRSSQVRPRPYSNAA 282
           MS GLDMSLD++IAK                  +    GP+R  NP     R  PY +A 
Sbjct: 1   MSTGLDMSLDDMIAKNRKSRGSGPARG------SGSGSGPIRRNNPNRKSNRSAPYQSAK 54

Query: 281 TT---------SPNLNASPEG---------KILVSNLAYKVTEADLWELFSTMIGPVRQV 156
                      S    A P           K+ +SNL Y V   D+ ELF+  +G +++ 
Sbjct: 55  APESTWEHDMYSDGSQAFPSRSSAGIETGTKLYISNLDYGVMNDDIKELFAE-VGELKRY 113

Query: 155 NLNFDQSGRSKGTASVVFARKNDAVRSVDKLRNITLDGREMKIEIV 18
            ++FD+SGRSKGTA VV++R+ DA+ +V K  ++ LDG+ MKIEIV
Sbjct: 114 TVHFDRSGRSKGTAEVVYSRRGDAIAAVKKYNDVQLDGKPMKIEIV 159


>ref|NP_001065229.1| Os12g0100100 [Oryza sativa Japonica Group]
           gi|77553349|gb|ABA96145.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113648417|dbj|BAF28929.1| Os12g0100100 [Oryza sativa
           Japonica Group] gi|215692544|dbj|BAG87964.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215768790|dbj|BAH01019.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|937940525|dbj|BAT15437.1| Os12g0100100 [Oryza sativa
           Japonica Group]
          Length = 228

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 50/142 (35%), Positives = 79/142 (55%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPRSSQVRPRPYSNAATTSPNL 264
           LDMSLD++I  K                 ++ +      P  +     P +     +P  
Sbjct: 7   LDMSLDDLITNKYKRRSRPGPAPSARRSHSRAATRSAAAPYHAITFQAPPTAYVHPTPAA 66

Query: 263 NASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARKNDA 84
           N     K+ +SNL Y V+  D+ ELFS  +G V++ ++N+D+SGRSKGTA VVF+RK+DA
Sbjct: 67  NVETGTKLYISNLDYAVSNEDIKELFSE-VGDVKRYSINYDRSGRSKGTAEVVFSRKSDA 125

Query: 83  VRSVDKLRNITLDGREMKIEIV 18
           + +V +  N+ LDG+ MK+E++
Sbjct: 126 LAAVKRYNNVQLDGKPMKLELI 147


>ref|XP_007869483.1| RNA-binding domain-containing protein [Gloeophyllum trabeum ATCC
           11539] gi|521721933|gb|EPQ52328.1| RNA-binding
           domain-containing protein [Gloeophyllum trabeum ATCC
           11539]
          Length = 212

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 4/149 (2%)
 Frame = -2

Query: 443 LDMSLDEIIAKKXXXXXXXXXXXXXXXGITKRSGGPVRNPR---SSQVRPRPYSNAATTS 273
           +D SLD+IIA +                 + R GGP    +   +  V P   +  A   
Sbjct: 1   MDKSLDDIIASRPRGIRRG----------SSRRGGPGGRAQILGNGPVSPSARARYAGAV 50

Query: 272 PNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFARK 93
           P   A P  KI+VSNL   V EA + ELF   +GP R+V L++D +GRSKG A+V F RK
Sbjct: 51  PVAGAPPADKIIVSNLPLDVNEAQIKELFHQTVGPCREVTLHYDAAGRSKGVAAVHFTRK 110

Query: 92  NDAVRSVDKLRNITLDG-REMKIEIVVAP 9
            DA ++  +  N  +DG R M+IEIVV P
Sbjct: 111 GDATKAYQQYNNRLIDGKRPMRIEIVVDP 139


Top