BLASTX nr result
ID: Ophiopogon21_contig00043210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00043210
(497 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC47437.1| COL-1 [Meloidogyne incognita] 128 1e-27
gb|AAC48358.1| cuticle preprocollagen [Meloidogyne incognita] 127 2e-27
dbj|BAQ59125.1| collagen 3 [Bursaphelenchus xylophilus] 111 6e-24
gb|KHN80850.1| Putative cuticle collagen [Toxocara canis] 108 2e-21
emb|CEF60897.1| Collagen alpha-5(IV) chain [Strongyloides ratti] 103 4e-20
emb|CEF63629.1| Collagen alpha-5(IV) chain [Strongyloides ratti] 103 5e-20
ref|XP_002633303.1| C. briggsae CBR-COL-125 protein [Caenorhabdi... 103 7e-20
gb|KHJ88569.1| nematode cuticle collagen domain protein [Oesopha... 103 7e-20
ref|NP_502107.1| COLlagen [Caenorhabditis elegans] gi|3874528|em... 103 7e-20
emb|CEF69700.1| Collagen alpha-5(IV) chain [Strongyloides ratti] 102 1e-19
gb|KHN75924.1| Putative cuticle collagen [Toxocara canis] 102 1e-19
emb|CEF69749.1| Collagen alpha-5(IV) chain [Strongyloides ratti] 101 2e-19
gb|KKA74147.1| collagen [Pristionchus pacificus] 101 2e-19
gb|KHN81199.1| Putative cuticle collagen [Toxocara canis] 101 2e-19
gb|EPB76942.1| nematode cuticle collagen domain protein [Ancylos... 101 2e-19
ref|NP_501527.1| COLlagen [Caenorhabditis elegans] gi|17542596|r... 101 2e-19
gb|KHJ77585.1| nematode cuticle collagen domain protein [Oesopha... 94 3e-19
gb|ERG80974.1| cuticle collagen 34 [Ascaris suum] 100 3e-19
gb|EPB76941.1| nematode cuticle collagen domain protein [Ancylos... 100 4e-19
gb|KHJ92510.1| nematode cuticle collagen domain protein [Oesopha... 100 4e-19
>gb|AAC47437.1| COL-1 [Meloidogyne incognita]
Length = 309
Score = 128 bits (322), Expect = 1e-27
Identities = 68/109 (62%), Positives = 77/109 (70%), Gaps = 20/109 (18%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
DY+ RIKAYRFVAYSTVSFS+ISL+SVCFTLPMLK+YVSNV MD EL+ CQ +AKDIW
Sbjct: 2 DYEARIKAYRFVAYSTVSFSVISLISVCFTLPMLKNYVSNVSLNMDRELTMCQGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG-------------------CQDCC 201
SEV QLK +P ++ GNRTARQA YG C DCC
Sbjct: 62 SEVLQLKNIP-VSGGNRTARQAGYGGGEAPVTGGSASSSGGGGQCSDCC 109
>gb|AAC48358.1| cuticle preprocollagen [Meloidogyne incognita]
Length = 308
Score = 127 bits (320), Expect = 2e-27
Identities = 69/109 (63%), Positives = 77/109 (70%), Gaps = 20/109 (18%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
DY+ RIKAYRFVAYSTVSFS+ISL+SVCFTLPML+SYVSNV + MD EL+ CQ AKDIW
Sbjct: 2 DYESRIKAYRFVAYSTVSFSVISLVSVCFTLPMLQSYVSNVASNMDRELNLCQGTAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG-------------------CQDCC 201
SEV+QLK +P AS NRTARQA YG C DCC
Sbjct: 62 SEVNQLKSIP--ASSNRTARQAGYGGGEAPVTGGSASSSGGGGQCSDCC 108
>dbj|BAQ59125.1| collagen 3 [Bursaphelenchus xylophilus]
Length = 302
Score = 111 bits (278), Expect(2) = 6e-24
Identities = 58/103 (56%), Positives = 72/103 (69%), Gaps = 14/103 (13%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
DY+ RIKAYRFVAYSTV+FS+IS+++VCFTLPML +YV V MD EL+ C+ +A DIW
Sbjct: 2 DYENRIKAYRFVAYSTVAFSVISVVTVCFTLPMLHNYVQRVSDAMDRELAMCKGSASDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG-------------CQDCC 201
SEV+ LK +P +GNRTARQA YG C+ CC
Sbjct: 62 SEVNHLKQIPF--AGNRTARQAGYGDAAVGGGAAAAGSCEACC 102
Score = 25.8 bits (55), Expect(2) = 6e-24
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 9/45 (20%)
Frame = -2
Query: 205 AVPAEDPARLVRPASLDAPATRDHPDRPDS---------PATPCP 98
A P P RP + AP T P RP + P PCP
Sbjct: 107 AGPPGPPGNPGRPGNPGAPGTPGQPGRPSTQPCEPVTPPPCKPCP 151
>gb|KHN80850.1| Putative cuticle collagen [Toxocara canis]
Length = 288
Score = 108 bits (270), Expect = 2e-21
Identities = 50/89 (56%), Positives = 68/89 (76%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D D RIKAY+FVAYS V+FS++++LSVC TLPM+ +YV +V M +++ C+ +AKDIW
Sbjct: 2 DLDSRIKAYKFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVQRTMHTQINFCRGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQAYGCQDCC 201
+EV LK +P +AS NRTARQ GC+ CC
Sbjct: 62 AEVGHLKQIP-VASRNRTARQVNGCEACC 89
>emb|CEF60897.1| Collagen alpha-5(IV) chain [Strongyloides ratti]
Length = 300
Score = 103 bits (258), Expect = 4e-20
Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 12/101 (11%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + ++KAYRFVAYS ++FS++S++SVC TLP++ SYVS+V +M E++ CQ +AKDIW
Sbjct: 2 DIENKVKAYRFVAYSAITFSVVSIISVCLTLPLIYSYVSSVKYQMTNEINLCQGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG-----------CQDCC 201
+EV +LK +P+I GNRT+RQA YG C+ CC
Sbjct: 62 AEVKELKKMPII-FGNRTSRQAGYGVDNEDLLPKGKCEACC 101
>emb|CEF63629.1| Collagen alpha-5(IV) chain [Strongyloides ratti]
Length = 302
Score = 103 bits (257), Expect = 5e-20
Identities = 54/102 (52%), Positives = 70/102 (68%), Gaps = 13/102 (12%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV +V M E+ C+ +AKDIW
Sbjct: 2 DLESRIKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVKRTMHNEVEFCRGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQ-------------AYGCQDCC 201
SEV+ LK +P+I SGNRTARQ A GC+ CC
Sbjct: 62 SEVATLKKIPMI-SGNRTARQSGYDAAIEAGASSAGGCEACC 102
>ref|XP_002633303.1| C. briggsae CBR-COL-125 protein [Caenorhabditis briggsae]
gi|187034513|emb|CAP26330.1| Protein CBR-COL-125
[Caenorhabditis briggsae]
Length = 299
Score = 103 bits (256), Expect = 7e-20
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 13/102 (12%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS+++++SVC TLPM+ +YV +V M +E++ C+ +AKDIW
Sbjct: 2 DLEQRIKAYRFVAYSAVAFSVVAVISVCVTLPMVYNYVHHVKRTMHSEINFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQ-------------AYGCQDCC 201
SEV+QLK +P SGNRTARQ A GC CC
Sbjct: 62 SEVNQLKNIP---SGNRTARQAGYDAGVTGGAASAGGCDACC 100
>gb|KHJ88569.1| nematode cuticle collagen domain protein [Oesophagostomum dentatum]
Length = 270
Score = 103 bits (256), Expect = 7e-20
Identities = 54/85 (63%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV NV M EL SC+++AKDIW
Sbjct: 2 DLENRIKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHNVKHTMHNELLSCKTSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG 216
SEV LK LP +GNRTARQA YG
Sbjct: 62 SEVRHLKNLP---TGNRTARQAGYG 83
>ref|NP_502107.1| COLlagen [Caenorhabditis elegans] gi|3874528|emb|CAA92729.1|
COLlagen [Caenorhabditis elegans]
Length = 299
Score = 103 bits (256), Expect = 7e-20
Identities = 53/102 (51%), Positives = 70/102 (68%), Gaps = 13/102 (12%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS+++++SVC TLPM+ +YV +V M +E++ C+ +AKDIW
Sbjct: 2 DLEQRIKAYRFVAYSAVAFSVVAVISVCVTLPMVYNYVHHVKRTMHSEINFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQ-------------AYGCQDCC 201
SEV+QLK +P SGNRTARQ A GC CC
Sbjct: 62 SEVNQLKSIP---SGNRTARQAGYDAGVTGGAASAGGCDACC 100
>emb|CEF69700.1| Collagen alpha-5(IV) chain [Strongyloides ratti]
Length = 303
Score = 102 bits (254), Expect = 1e-19
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D +GRIKAYRFVAYS V FSI+++LSVC TLPM+ +YV +V M E+ C+ +AKDIW
Sbjct: 2 DLEGRIKAYRFVAYSAVVFSIVAVLSVCVTLPMVYNYVHHVKRSMYNEVKHCKESAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA 222
SEV+ LK LP++ SGNRTARQA
Sbjct: 62 SEVNTLKRLPVL-SGNRTARQA 82
>gb|KHN75924.1| Putative cuticle collagen [Toxocara canis]
Length = 381
Score = 102 bits (253), Expect = 1e-19
Identities = 50/105 (47%), Positives = 71/105 (67%), Gaps = 14/105 (13%)
Frame = -1
Query: 473 MADYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKD 294
M D D RIKAYRFVAYS V+FS++++LSVC TLPM+ ++V ++ +M E+ C+S++KD
Sbjct: 1 MDDIDSRIKAYRFVAYSAVTFSVVAVLSVCLTLPMVYNHVHHIRQQMHNEVIFCKSSSKD 60
Query: 293 IWSEVSQLKGLPLIASGNRTARQAY--------------GCQDCC 201
IW+EV +LK +PL+ NRTAR+A GC +CC
Sbjct: 61 IWNEVQELKKIPLLDGRNRTARRANYGDVGVGGSAKAAGGCLECC 105
>emb|CEF69749.1| Collagen alpha-5(IV) chain [Strongyloides ratti]
Length = 303
Score = 101 bits (252), Expect = 2e-19
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FSI+++LSVC TLPM+ +YV +V M E+ C+ +AKDIW
Sbjct: 2 DLESRIKAYRFVAYSAVTFSIVAVLSVCVTLPMVYNYVHHVKRTMHNEVQFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA 222
SEV+ LK LP++ SGNRTARQA
Sbjct: 62 SEVNSLKRLPVL-SGNRTARQA 82
>gb|KKA74147.1| collagen [Pristionchus pacificus]
Length = 302
Score = 101 bits (251), Expect = 2e-19
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV +V M E+ C+ +AKDIW
Sbjct: 2 DLETRIKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVKRSMHNEIQFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQAYG 216
SEV LK +P A+ NRTARQAYG
Sbjct: 62 SEVHHLKSIP-AAAKNRTARQAYG 84
>gb|KHN81199.1| Putative cuticle collagen [Toxocara canis]
Length = 287
Score = 101 bits (251), Expect = 2e-19
Identities = 50/89 (56%), Positives = 63/89 (70%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
+ D RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV V M E+ C+ AKDIW
Sbjct: 2 ELDNRIKAYRFVAYSAVAFSVVAVLSVCITLPMVYNYVHQVRRHMQNEVVFCKGTAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQAYGCQDCC 201
SEV L+ + S NRTARQA GC+ CC
Sbjct: 62 SEVHDLRNNAV--SRNRTARQASGCEACC 88
>gb|EPB76942.1| nematode cuticle collagen domain protein [Ancylostoma ceylanicum]
gi|597834292|gb|EYB83976.1| hypothetical protein
Y032_0325g2544 [Ancylostoma ceylanicum]
Length = 300
Score = 101 bits (251), Expect = 2e-19
Identities = 55/103 (53%), Positives = 69/103 (66%), Gaps = 14/103 (13%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV +V M E++ C+ +AKDIW
Sbjct: 2 DLEHRIKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVKRTMHGEINFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG-------------CQDCC 201
SEV LK LP SGNRTARQA YG C+ CC
Sbjct: 62 SEVRHLKDLP---SGNRTARQAGYGDGGVSGGSAAAGSCEACC 101
>ref|NP_501527.1| COLlagen [Caenorhabditis elegans] gi|17542596|ref|NP_501526.1|
COLlagen [Caenorhabditis elegans]
gi|3880306|emb|CAA90995.1| COLlagen [Caenorhabditis
elegans] gi|3880308|emb|CAA90997.1| COLlagen
[Caenorhabditis elegans] gi|33188211|gb|AAP97868.1|
COLlagen structural gene, probable cuticle component,
from embryo to adult (28.7 kD) (col-117) [Caenorhabditis
elegans] gi|33188215|gb|AAP97870.1| COLlagen structural
gene, probable cuticle component, from embryo to adult
(28.7 kD) (col-3) [Caenorhabditis elegans]
Length = 299
Score = 101 bits (251), Expect = 2e-19
Identities = 52/102 (50%), Positives = 69/102 (67%), Gaps = 13/102 (12%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS+++++SVC TLPM+ +YV +V M +E++ C+ +AKDIW
Sbjct: 2 DLEQRIKAYRFVAYSAVAFSVVAVISVCVTLPMVYNYVHHVKRTMHSEINFCKGSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQ-------------AYGCQDCC 201
SEV+ LK +P SGNRTARQ A GC CC
Sbjct: 62 SEVNHLKAIP---SGNRTARQAGYDAGVTGGSASAGGCDACC 100
>gb|KHJ77585.1| nematode cuticle collagen domain protein [Oesophagostomum dentatum]
Length = 289
Score = 94.4 bits (233), Expect(2) = 3e-19
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = -1
Query: 473 MADYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKD 294
M D + R+ AYRFVAYS V+FS+I+++S+C TLPM+ +Y+ +V + E+ C+ +AK
Sbjct: 1 MGDDNHRLAAYRFVAYSAVTFSVIAVVSICITLPMVYNYIHHVKRSLKTEIHYCKGSAKS 60
Query: 293 IWSEVSQLKGLPLIASGNRTARQAYG-CQDCC 201
IW EVS +K P + NRT RQA G C DCC
Sbjct: 61 IWDEVSHIKSQP---ASNRTTRQAGGPCDDCC 89
Score = 27.3 bits (59), Expect(2) = 3e-19
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Frame = -2
Query: 199 PAEDPARLVRPASLDAPATRDHPDRP------DSPATPCPPRAS 86
P P R RP AP P RP + P PCPP A+
Sbjct: 96 PQGPPGRPGRPGRPGAPGMPGAPGRPPQKPCVEVPKPPCPPCAA 139
>gb|ERG80974.1| cuticle collagen 34 [Ascaris suum]
Length = 287
Score = 100 bits (250), Expect = 3e-19
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV+ + M E+ C+ AKDIW
Sbjct: 2 DLNSRIKAYRFVAYSAVAFSVVAVLSVCITLPMVYNYVNQIRRHMHNEVVFCKGTAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQAYGCQDCC 201
SEV L+ + S NRTARQA GC+ CC
Sbjct: 62 SEVHDLRNSAV--SHNRTARQAPGCEACC 88
>gb|EPB76941.1| nematode cuticle collagen domain protein [Ancylostoma ceylanicum]
Length = 301
Score = 100 bits (249), Expect = 4e-19
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 15/104 (14%)
Frame = -1
Query: 467 DYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNAKDIW 288
D + RIKAYRFVAYS V+FS++++LSVC TLPM+ +YV +V M E++ C+S+AKDIW
Sbjct: 2 DLEHRIKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVKRTMHNEINFCKSSAKDIW 61
Query: 287 SEVSQLKGLPLIASGNRTARQA-YG--------------CQDCC 201
SEV+ LK +P +GNRTARQA YG C CC
Sbjct: 62 SEVNHLKNVP---AGNRTARQAGYGDAGVSGGNAVAGGSCDSCC 102
>gb|KHJ92510.1| nematode cuticle collagen domain protein [Oesophagostomum dentatum]
Length = 308
Score = 100 bits (249), Expect = 4e-19
Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 13/106 (12%)
Frame = -1
Query: 479 ATMADYDGRIKAYRFVAYSTVSFSIISLLSVCFTLPMLKSYVSNVGTKMDAELSSCQSNA 300
A D + R+KAYRFVAYS V+FS++++LSVC TLPM+ +YV +V M E++ C+ +A
Sbjct: 6 AAAMDLETRVKAYRFVAYSAVTFSVVAVLSVCVTLPMVYNYVHHVKRTMHNEINFCKGSA 65
Query: 299 KDIWSEVSQLKGLPLIASGNRTARQA-YG------------CQDCC 201
KDIW+EV LK +PL+A NRTARQA YG C+ CC
Sbjct: 66 KDIWTEVHNLKNIPLVA--NRTARQAGYGDAAVTGGAQQGSCEACC 109