BLASTX nr result

ID: Ophiopogon21_contig00042829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00042829
         (492 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004979015.1| PREDICTED: F-box protein At5g07610-like [Set...    62   1e-07

>ref|XP_004979015.1| PREDICTED: F-box protein At5g07610-like [Setaria italica]
           gi|944229750|gb|KQK94136.1| hypothetical protein
           SETIT_026470mg [Setaria italica]
          Length = 392

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 47/138 (34%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
 Frame = -3

Query: 475 YIGESGGKLQMVRRSKNEKV-ALFCILEMDLQRSGWSVLCEVDLEPVMDLYPEVQERDIW 299
           YIGES G LQM+  +K EK+ A F ILEM+  +S WS+L  VDL  V +L+PE++    W
Sbjct: 252 YIGESDGHLQMIGYTKKEKLTACFEILEMNSDQSEWSLLYRVDLSRVKELHPEIE----W 307

Query: 298 STGVTLNIVWAGRNYLGFTPVHFIR--XXXXXXXXXXXXXXGKVISYRITDKVFKEVCRL 125
            T  T        +YL  +PV  IR                GK++ Y + D+        
Sbjct: 308 PTWDTRRDEHKVIDYLALSPVCVIRGTREAGKDGVLIFSIPGKIMLYDMKDQGISVTREA 367

Query: 124 LPPTGPYCLHDWHKFFFF 71
             P      H W+ FF +
Sbjct: 368 RSPYNLELEHPWYYFFAY 385


Top