BLASTX nr result
ID: Ophiopogon21_contig00040911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00040911
(366 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 70 5e-10
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 70 6e-10
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 70 8e-10
gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsi... 69 1e-09
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 69 1e-09
ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotei... 69 2e-09
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 69 2e-09
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 69 2e-09
ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038... 67 4e-09
emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera] 67 4e-09
gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsi... 67 7e-09
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 66 9e-09
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 66 9e-09
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 65 2e-08
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 65 2e-08
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712... 65 2e-08
ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda] 64 3e-08
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 64 3e-08
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 64 6e-08
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 63 8e-08
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 70.5 bits (171), Expect = 5e-10
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y++ E EA +K L+K FG Q +V+I C+SQ + L+ +++H+R KHI++++H
Sbjct: 1259 YMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIA-LSKNNVHHERTKHIDVKFHF 1317
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ I D KV + KI T N ADI + +PV K +T+L+FL+V
Sbjct: 1318 IREIIADGKV-EVSKISTEKNPADIFTKVLPVNKFQTALDFLRV 1360
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 70.1 bits (170), Expect = 6e-10
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A E EA ++ L G QD+V++ C+SQ + L+ ++H+R KHI++RYH
Sbjct: 1238 YMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIA-LSKNSVHHERTKHIDVRYHF 1296
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ I D + I +VKI T N ADI +T+PV KL+ +L L+V
Sbjct: 1297 IREKIADGE-IQVVKISTTWNPADIFTKTVPVSKLQEALKLLRV 1339
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 69.7 bits (169), Expect = 8e-10
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y++ E EA +K L++ FG Q +V+I C+SQ + L+ +++H R KHI+++YHK
Sbjct: 1126 YMSLTEAVKEAIWLKGLLQDFGYEQKTVEIFCDSQSAIA-LSKNNVHHDRTKHIDIKYHK 1184
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ ++ + V+ + KI T +N ADI + +PV K +T+L+ L+V
Sbjct: 1185 IR-EVIADGVVEVKKICTLVNSADIFTKVVPVSKFKTALHSLRV 1227
>gb|AAD29756.1|AF076243_3 putative transposon protein [Arabidopsis thaliana]
gi|7267201|emb|CAB77912.1| putative transposon protein
[Arabidopsis thaliana]
Length = 570
Score = 69.3 bits (168), Expect = 1e-09
Identities = 35/93 (37%), Positives = 62/93 (66%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A E EA M+ L+K G+ QD V + +SQCV+ +L+ ++M+H+R KHI ++YH
Sbjct: 478 YVAITEAVKEALWMQGLLKDMGVKQDKVLVWSDSQCVI-SLSKKNMFHERTKHIAVKYHF 536
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPVK 86
I+ +++ + ++KI T+ N AD++ + IPV+
Sbjct: 537 IR-DVIENGDVEVLKIHTSQNPADMLTKVIPVQ 568
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 68.9 bits (167), Expect = 1e-09
Identities = 35/91 (38%), Positives = 58/91 (63%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YIAA ET E +K ++ G+ Q ++C+SQ + +L+ MYH R KHI++RYH
Sbjct: 1224 YIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAI-DLSKNSMYHARTKHIDVRYHW 1282
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIP 92
I+ +VD++ + ++KI TN N AD++ + +P
Sbjct: 1283 IR-EMVDDESLKVLKISTNENPADMLTKVVP 1312
>ref|XP_013639641.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Brassica oleracea var. oleracea]
Length = 255
Score = 68.6 bits (166), Expect = 2e-09
Identities = 36/106 (33%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
+I E S EA ++ + G QD V++ C+SQ + L+ ++H++ KH++++Y+
Sbjct: 151 WITLGEASREAMWLRGFINELGFEQDLVEVFCDSQSAIA-LSRNPVHHEKTKHVDVKYNF 209
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
++ +V EK+I++VKI T N ADI + +PV K+R +L FL++ +
Sbjct: 210 VR-ELVSEKIIDVVKIATQYNPADIFTKVLPVGKMREALRFLRITE 254
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 68.6 bits (166), Expect = 2e-09
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A + + EA +K V G +Q +V IHC+SQ + LA +YH+R KHI+++YH
Sbjct: 1033 YMALTDGAKEAIWLKGHVSELGFVQKTVNIHCDSQSAI-ALAKNAVYHERTKHIDVKYHF 1091
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
I+ +V+ + ++KI T N ADI + +PV K + +L L+V Q
Sbjct: 1092 IR-DLVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQDALELLRVSQ 1136
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 68.6 bits (166), Expect = 2e-09
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y++ E EA +K L+K FG Q SV+I C+SQ + L+ +++H+R KHI+++YH
Sbjct: 1252 YMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIA-LSKNNVHHERTKHIDVKYHF 1310
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ I+ + + ++KI T N ADI + + V K + +LN L+V
Sbjct: 1311 IR-EIISDGTVEVLKISTEKNPADIFTKVLAVSKFQAALNLLRV 1353
>ref|XP_010912064.1| PREDICTED: uncharacterized protein LOC105038071 [Elaeis guineensis]
Length = 397
Score = 67.4 bits (163), Expect = 4e-09
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A E EA +K LV+ + QD + IHC+SQ + +LA + MYH+R K +++RYH
Sbjct: 293 YMALTEAEKEAIWLKGLVQDLDLEQDCLDIHCDSQSAL-HLARDQMYHERTKQVDVRYHF 351
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETI-PVKLRTSLNFLQV 56
I+ +V++ + L KI T NLAD+ + I +K + LN + +
Sbjct: 352 IR-DLVEKGDVRLQKIYTAYNLADMFTKPILAIKFKNFLNLIGI 394
>emb|CAN77253.1| hypothetical protein VITISV_020397 [Vitis vinifera]
Length = 215
Score = 67.4 bits (163), Expect = 4e-09
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A E E+ + LVK GI Q VQ++C+SQ ++ LA +YH R KHI++R+HK
Sbjct: 111 YMAIAEAGKESLWLTGLVKELGIQQGGVQLYCDSQSAIY-LAKNQVYHARTKHIDVRFHK 169
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ +V + L K+ T+ N AD++ + + + K + LN + V
Sbjct: 170 IK-ELVSSGELLLEKVHTSENAADMLTKPVTIEKFKHCLNLINV 212
>gb|AAD23679.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 838
Score = 66.6 bits (161), Expect = 7e-09
Identities = 41/106 (38%), Positives = 60/106 (56%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YIA E + EA+ +K L+ G Q +V IHC+SQ + LA ++H+R KHI R+H
Sbjct: 734 YIALTEAAKEAYWLKDLMNELGFKQGAVDIHCDSQSAI-ALAKNAVHHERTKHIQRRFHY 792
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPVKLRTSLNFLQVLQK 47
I+ I D +V ++KI T N +DI + +PV FL L+K
Sbjct: 793 IRDAITDGEV-KVLKISTVHNPSDIFTKVVPVN-----KFLSALKK 832
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 66.2 bits (160), Expect = 9e-09
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YIAA E EA +K L+ G+IQ+++ + C++Q +F LA YH R KHI+++YH
Sbjct: 192 YIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIF-LAKNQTYHARTKHIDVKYHY 250
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETI-PVKLRTSLNFLQVLQ 50
++ I++ + L KI T N +D++ + + VK + L +Q+L+
Sbjct: 251 VR-EIIEGGDVLLKKIDTKDNPSDMLTKVVSEVKFQHCLKLIQILR 295
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 66.2 bits (160), Expect = 9e-09
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y++ E EA MK L+K FG Q SV+I C+SQ + L+ +++H+R KHI++RY
Sbjct: 1229 YMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIA-LSKNNVHHERTKHIDVRYQY 1287
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQV 56
I+ I+ ++VKI T N ADI + +PV K + +L LQV
Sbjct: 1288 IR-DIIANGDGDVVKIDTEKNPADIFTKIVPVNKFQAALTLLQV 1330
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 65.5 bits (158), Expect = 2e-08
Identities = 37/106 (34%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YIA E + EA +K L++ G+ QD V+I C+SQ + L+ +YH+R KHI++R++
Sbjct: 1251 YIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAIC-LSKNSVYHERTKHIDVRFNY 1309
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
I+ +V+ ++++KI T+ N D + + IPV K +++L L++++
Sbjct: 1310 IR-DVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVLKLMK 1354
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 65.5 bits (158), Expect = 2e-08
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+AA E + EA +K LV G+ Q SV + C+SQ + L +H+R KHI++R+H
Sbjct: 835 YVAAAEATKEALWLKGLVSELGMNQKSVTVFCDSQSALC-LTKNQGFHERTKHIDVRFHF 893
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETI-PVKLRTSLNFLQV 56
I+ I ++ ++N+ KI T N AD++ + I VK + LN + V
Sbjct: 894 IR-DIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNLINV 936
>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix dactylifera]
Length = 2199
Score = 65.1 bits (157), Expect = 2e-08
Identities = 34/91 (37%), Positives = 55/91 (60%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YI E + EA +K L++ G+ Q +V +H +SQ + L +YH R HI++RYHK
Sbjct: 1329 YIGITEVAKEALCLKRLIQEMGVNQSTVVLHSDSQSAL-QLVQNPVYHARTNHIDMRYHK 1387
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIP 92
I+ +V+E + LVK+ T N +D + +T+P
Sbjct: 1388 IR-ELVEEGEVMLVKVHTKKNQSDALTKTLP 1417
>ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda]
Length = 480
Score = 64.3 bits (155), Expect = 3e-08
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A VE + EA L + + Q+ +HC+SQ + NL ++H R K+I+LRYHK
Sbjct: 15 YMAVVEPAKEAIWSTGLARELRVRQEDTVLHCDSQSAI-NLTKNQVFHTRTKYIDLRYHK 73
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
I+ +V E +I L KI TN N A+I+ + + K + L+ L + Q
Sbjct: 74 IK-ELVLEGIIYLKKIHTNENPANILTKLVTTEKFKLCLDLLNICQ 118
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 64.3 bits (155), Expect = 3e-08
Identities = 34/91 (37%), Positives = 57/91 (62%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
YIAAVE S E +K ++ G+ Q + C+S+ + +L+ MYH R KHI++RYH
Sbjct: 584 YIAAVEASKEMLWLKRFLQELGLKQSEYVVFCDSKSAM-DLSKNIMYHARTKHIDVRYHW 642
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIP 92
++ ++ E+++ L KI TN N AD++ + +P
Sbjct: 643 LR-VVIKERLMKLKKIHTNKNGADMLTKVVP 672
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 63.5 bits (153), Expect = 6e-08
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
Y+A E EA +K G QD V++H +SQ + LA ++H+R KHI++R H
Sbjct: 1231 YMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAI-TLAKNSVHHERTKHIDIRLHF 1289
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
I+ I+ +I +VKI T N A+I +T+P+ K +LN L+V +
Sbjct: 1290 IR-DIICAGLIKVVKIATECNPANIFTKTVPLAKFEGALNMLRVTE 1334
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 63.2 bits (152), Expect = 8e-08
Identities = 36/106 (33%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -3
Query: 364 YIAAVETSNEAF*MK*LVKIFGIIQDSVQIHCESQCVVFNLANEHMYHKRMKHINLRYHK 185
++A E + EA +K L+K G+ QD V + C+SQ + L+ +H+R KHI++RY+
Sbjct: 482 FMALTEAAKEALWIKGLMKDLGLEQDKVTLWCDSQSAIC-LSKNSTHHERTKHIDVRYNF 540
Query: 184 IQ*GIVDEKVINLVKIGTNMNLADIMIETIPV-KLRTSLNFLQVLQ 50
I+ +V+ ++++KI T+ N AD + ++IPV K +++L L++++
Sbjct: 541 IR-DVVEAGDVDVLKIHTSRNPADALTKSIPVNKFQSALELLKLVK 585