BLASTX nr result
ID: Ophiopogon21_contig00039479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00039479
(393 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_051016923.1| hypothetical protein, partial [Nocardia cyri... 123 5e-26
gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase... 122 1e-25
ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carbox... 120 3e-25
ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlor... 110 5e-22
ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlor... 110 5e-22
gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 105 1e-20
dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase s... 101 2e-19
gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase... 100 7e-19
dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s... 96 1e-17
dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase s... 95 2e-17
ref|XP_002955678.1| hypothetical protein VOLCADRAFT_96573 [Volvo... 94 3e-17
dbj|BAI47769.1| ribulose -1, 5-bisphosphate carboxylase/oxygenas... 94 4e-17
dbj|BAI47767.1| ribulose bisphosphate carboxylase small subunit ... 94 4e-17
sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carbox... 94 4e-17
gb|AAS48504.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 93 7e-17
prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1 93 9e-17
gb|AAS48503.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 92 2e-16
sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carbo... 92 2e-16
ref|XP_013902239.1| ribulose-bisphosphate carboxylase small chai... 92 2e-16
ref|XP_013900278.1| ribulose-bisphosphate carboxylase small chai... 92 2e-16
>ref|WP_051016923.1| hypothetical protein, partial [Nocardia cyriacigeorgica]
Length = 199
Score = 123 bits (309), Expect = 5e-26
Identities = 57/91 (62%), Positives = 69/91 (75%)
Frame = -3
Query: 280 VKCQAPRPAFSGLARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPL 101
V + + FSGLARV L TFA RTVSNG +TRQM+VW+PTDNKFFET S+LPPL
Sbjct: 15 VATKPSKAGFSGLARVALPSKAVPTFAQRTVSNGCRTRQMLVWEPTDNKFFETFSYLPPL 74
Query: 100 SQDEIARQVDYVTRNGWTPCLEFAEADMAYV 8
+ D+IA+QVDY+ R GWTPCLEF+ + AYV
Sbjct: 75 TDDQIAKQVDYIIRQGWTPCLEFSRPEGAYV 105
>gb|ACF16408.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Lobosphaera incisa] gi|657202139|gb|AID50176.1|
chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit [Lobosphaera incisa]
Length = 189
Score = 122 bits (306), Expect = 1e-25
Identities = 55/76 (72%), Positives = 67/76 (88%)
Frame = -3
Query: 229 LQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGW 50
L A+ TFA +TVSNG+KTRQMMVWQPT+N++FETLSFLPPL+ D+IA+QVDY+ NGW
Sbjct: 28 LAPARAATFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLTDDQIAKQVDYMINNGW 87
Query: 49 TPCLEFAEADMAYVAS 2
PCLEF+EA+MAYVAS
Sbjct: 88 VPCLEFSEANMAYVAS 103
>ref|XP_005648578.1| chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase small
subunit [Coccomyxa subellipsoidea C-169]
gi|384250555|gb|EIE24034.1| chloroplast ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
[Coccomyxa subellipsoidea C-169]
Length = 195
Score = 120 bits (302), Expect = 3e-25
Identities = 56/91 (61%), Positives = 68/91 (74%)
Frame = -3
Query: 280 VKCQAPRPAFSGLARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPL 101
V + + FSGLARV L TFA RTVSNG +TRQM+VW+P DNKFFET S+LPPL
Sbjct: 15 VAAKPSKAGFSGLARVALPAKAVPTFAQRTVSNGCRTRQMLVWEPVDNKFFETFSYLPPL 74
Query: 100 SQDEIARQVDYVTRNGWTPCLEFAEADMAYV 8
+ D+IA+QVDY+ R GWTP LEF+ A+ AYV
Sbjct: 75 TDDQIAKQVDYIIRQGWTPALEFSNAESAYV 105
>ref|XP_005852247.1| hypothetical protein CHLNCDRAFT_29368 [Chlorella variabilis]
gi|307111911|gb|EFN60145.1| hypothetical protein
CHLNCDRAFT_29368 [Chlorella variabilis]
Length = 184
Score = 110 bits (274), Expect = 5e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 244 LARVPLQKAQRNTFAARTVSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVD 71
+A PL++A +NTFAARTVSNG K M VW P +NK FET SFLPPL+ EI+RQVD
Sbjct: 16 MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74
Query: 70 YVTRNGWTPCLEFAEADMAYV 8
Y+ RNGWTPCLEFA+AD AYV
Sbjct: 75 YIVRNGWTPCLEFADADHAYV 95
>ref|XP_005851923.1| hypothetical protein CHLNCDRAFT_59545 [Chlorella variabilis]
gi|307111587|gb|EFN59821.1| hypothetical protein
CHLNCDRAFT_59545 [Chlorella variabilis]
Length = 184
Score = 110 bits (274), Expect = 5e-22
Identities = 54/81 (66%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -3
Query: 244 LARVPLQKAQRNTFAARTVSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVD 71
+A PL++A +NTFAARTVSNG K M VW P +NK FET SFLPPL+ EI+RQVD
Sbjct: 16 MASTPLKQA-KNTFAARTVSNGSIKKVSAMQVWTPLNNKMFETFSFLPPLTDGEISRQVD 74
Query: 70 YVTRNGWTPCLEFAEADMAYV 8
Y+ RNGWTPCLEFA+AD AYV
Sbjct: 75 YIVRNGWTPCLEFADADHAYV 95
>gb|ACU32662.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 184
Score = 105 bits (263), Expect = 1e-20
Identities = 53/92 (57%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = -3
Query: 250 SGLARVPLQKAQRN-------TFAARTVSNG--MKTRQMMVWQPTDNKFFETLSFLPPLS 98
+ L + P+ QR+ TF A TVSNG KT MMVW P +NKFFET S+LPPLS
Sbjct: 7 ASLVKAPVATTQRSVLKPAGKTFKAVTVSNGNVQKTSAMMVWTPVNNKFFETFSYLPPLS 66
Query: 97 QDEIARQVDYVTRNGWTPCLEFAEADMAYVAS 2
D+IARQVDY+ NGWTPCLEFA+ D AYV++
Sbjct: 67 GDQIARQVDYIVLNGWTPCLEFADPDCAYVSN 98
>dbj|BAM68686.1| ribulose 1,5-bisphosphate carboxlase/oxygenase small subunit
[Botryococcus braunii] gi|426206142|dbj|BAM68687.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Botryococcus braunii]
Length = 190
Score = 101 bits (252), Expect = 2e-19
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = -3
Query: 244 LARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYV 65
+AR + N +A +TVSNG+KT MMVW PT+NKFFET S+LPPLS EIA+QV+Y+
Sbjct: 24 VARPAILAPAVNQWAKKTVSNGIKTSAMMVWTPTNNKFFETFSYLPPLSDAEIAKQVEYI 83
Query: 64 TRNGWTPCLEFAEADMAYV 8
NG+ CLEFAE+D+AYV
Sbjct: 84 VNNGYIACLEFAESDLAYV 102
>gb|ACU32661.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Chlorella pyrenoidosa]
Length = 181
Score = 99.8 bits (247), Expect = 7e-19
Identities = 47/76 (61%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = -3
Query: 223 KAQRNTFAARTVSNG--MKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGW 50
K +NT AARTVSNG KT M VW P +NK FET S+LPPL+ EI+RQVDY+ NGW
Sbjct: 20 KQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLPPLTDAEISRQVDYIVNNGW 79
Query: 49 TPCLEFAEADMAYVAS 2
TPCLEFAE+ AY ++
Sbjct: 80 TPCLEFAESASAYASN 95
>dbj|BAD42334.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 95.9 bits (237), Expect = 1e-17
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = -3
Query: 232 PLQKAQRNTFAART--VSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYV 65
P+ K + ART VSNG KT M+VW P +NKFFET SFLPPLS EI +QVDY+
Sbjct: 16 PITKVNATSTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQVDYI 75
Query: 64 TRNGWTPCLEFAEADMAYV 8
RNGWTPCLEF++ + AY+
Sbjct: 76 VRNGWTPCLEFSDPEGAYI 94
>dbj|BAD42333.1| ribulose-1,5-bisphosphate carboxyase/oxygenase small subunit
[Nannochloris bacillaris]
Length = 182
Score = 95.1 bits (235), Expect = 2e-17
Identities = 46/79 (58%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = -3
Query: 232 PLQKAQRNTFAART--VSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYV 65
P+ K + ART VSNG KT M+VW P +NKFFET SFLPPLS EI +QVDY+
Sbjct: 16 PITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSDSEITKQVDYI 75
Query: 64 TRNGWTPCLEFAEADMAYV 8
RNGWTPCLEF++ + AY+
Sbjct: 76 VRNGWTPCLEFSDPEGAYI 94
>ref|XP_002955678.1| hypothetical protein VOLCADRAFT_96573 [Volvox carteri f.
nagariensis] gi|28797560|gb|AAO46872.1|
ribulose-bisphosphate carboxylase small subunit Vc2
[Volvox carteri] gi|300259087|gb|EFJ43318.1|
hypothetical protein VOLCADRAFT_96573 [Volvox carteri f.
nagariensis]
Length = 185
Score = 94.4 bits (233), Expect = 3e-17
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -3
Query: 262 RPAFSGLARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDEIA 83
RPA SG+ V + K + A V+ + +MMVW P +NK FET S+LPPLS ++IA
Sbjct: 16 RPARSGVRPVAVLKP---SVRATPVATPTQANKMMVWTPVNNKMFETFSYLPPLSDEQIA 72
Query: 82 RQVDYVTRNGWTPCLEFAEADMAYVAS 2
QVDY+ NGW PCLEFAEAD AYV++
Sbjct: 73 AQVDYIVANGWIPCLEFAEADKAYVSN 99
>dbj|BAI47769.1| ribulose -1, 5-bisphosphate carboxylase/oxygenase small subunit
[Ulva pertusa]
Length = 180
Score = 94.0 bits (232), Expect = 4e-17
Identities = 49/87 (56%), Positives = 58/87 (66%)
Frame = -3
Query: 268 APRPAFSGLARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDE 89
AP+ AF GL++ T A V+N K +MMVW P +NK FET SFLPPLS E
Sbjct: 13 APK-AFKGLSKA--------TKPAAKVANVSKASEMMVWTPLNNKMFETFSFLPPLSHGE 63
Query: 88 IARQVDYVTRNGWTPCLEFAEADMAYV 8
IARQVDY+ NGWT CLEFA++D AYV
Sbjct: 64 IARQVDYIIANGWTGCLEFADSDCAYV 90
>dbj|BAI47767.1| ribulose bisphosphate carboxylase small subunit [Ulva pertusa]
gi|262072921|dbj|BAI47768.1| ribulose -1, 5-bisphosphate
carboxylase/oxygenase small subunit [Ulva pertusa]
Length = 180
Score = 94.0 bits (232), Expect = 4e-17
Identities = 49/87 (56%), Positives = 58/87 (66%)
Frame = -3
Query: 268 APRPAFSGLARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDE 89
AP+ AF GL++ T A V+N K +MMVW P +NK FET SFLPPLS E
Sbjct: 13 APK-AFKGLSKA--------TKPAAKVANVSKASEMMVWTPLNNKMFETFSFLPPLSHGE 63
Query: 88 IARQVDYVTRNGWTPCLEFAEADMAYV 8
IARQVDY+ NGWT CLEFA++D AYV
Sbjct: 64 IARQVDYIIANGWTGCLEFADSDCAYV 90
>sp|P26985.2|RBS_BATOE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|2654261|emb|CAA40538.1| ribulose
bisphosphate carboxylase small subunit [Batophora
oerstedii]
Length = 175
Score = 94.0 bits (232), Expect = 4e-17
Identities = 42/65 (64%), Positives = 52/65 (80%), Gaps = 2/65 (3%)
Frame = -3
Query: 196 RTVSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEA 23
R +SNG K+R MMVW+P +NKFFET S+LPPL+ D+I +QVDY+ RN WTPCLEFA +
Sbjct: 23 RFLSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGS 82
Query: 22 DMAYV 8
D AYV
Sbjct: 83 DQAYV 87
>gb|AAS48504.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella tertiolecta]
Length = 188
Score = 93.2 bits (230), Expect = 7e-17
Identities = 40/59 (67%), Positives = 48/59 (81%)
Frame = -3
Query: 178 MKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEADMAYVAS 2
++ QMMVWQP +NK FET S+LPPL+ D+IARQVDY+ NGWTPCLEFAE AYV+S
Sbjct: 41 VRANQMMVWQPINNKQFETFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSS 99
>prf||1803224A RuBisCO:SUBUNIT=small:ISOTYPE=1
Length = 175
Score = 92.8 bits (229), Expect = 9e-17
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 2/65 (3%)
Frame = -3
Query: 196 RTVSNGM--KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEA 23
R +SNG K+R MMVW P +NKFFET S+LPPL+ D+I +QVDY+ RN WTPCLEFA +
Sbjct: 23 RFLSNGTISKSRAMMVWXPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGS 82
Query: 22 DMAYV 8
D AYV
Sbjct: 83 DQAYV 87
>gb|AAS48503.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Dunaliella tertiolecta]
Length = 189
Score = 92.0 bits (227), Expect = 2e-16
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = -3
Query: 202 AARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEA 23
AA ++ QMMVW P +NK FET S+LPPL+ D+IA+QVDY+ NGWTPCLEFAE
Sbjct: 34 AAPKAQPAVRANQMMVWNPINNKQFETFSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQ 93
Query: 22 DMAYVAS 2
+ AYV+S
Sbjct: 94 NQAYVSS 100
>sp|P16137.1|RBS4_ACEAT RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|732554|emb|CAA36111.1| ribulose
bisphosphate carboxylase, small subunit precursor
[Acetabularia acetabulum]
Length = 182
Score = 91.7 bits (226), Expect = 2e-16
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = -3
Query: 241 ARVPLQKAQRNTFAARTVSNGMKTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVT 62
A P + +FA+ TV+N K R+MMVWQP +NK FET SFLPPL+ ++I++QVDY+
Sbjct: 20 AATPKVVTSKRSFAS-TVAN--KNREMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 76
Query: 61 RNGWTPCLEFAEADMAYVAS 2
N WTPCLEFA +D AY +
Sbjct: 77 ANSWTPCLEFAASDQAYAGN 96
>ref|XP_013902239.1| ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum] gi|761972883|gb|KIZ03220.1|
ribulose-bisphosphate carboxylase small chain
[Monoraphidium neglectum]
Length = 166
Score = 91.7 bits (226), Expect = 2e-16
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3
Query: 175 KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEADMAYVAS 2
K +MMVWQP +NKFFET S+LPPL+ ++IARQVDY+ NGWTPCLEFA D AY ++
Sbjct: 21 KANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSN 78
>ref|XP_013900278.1| ribulose-bisphosphate carboxylase small chain [Monoraphidium
neglectum] gi|761970478|gb|KIZ01259.1|
ribulose-bisphosphate carboxylase small chain
[Monoraphidium neglectum]
Length = 165
Score = 91.7 bits (226), Expect = 2e-16
Identities = 38/58 (65%), Positives = 47/58 (81%)
Frame = -3
Query: 175 KTRQMMVWQPTDNKFFETLSFLPPLSQDEIARQVDYVTRNGWTPCLEFAEADMAYVAS 2
K +MMVWQP +NKFFET S+LPPL+ ++IARQVDY+ NGWTPCLEFA D AY ++
Sbjct: 20 KANKMMVWQPVNNKFFETFSYLPPLNDNQIARQVDYIINNGWTPCLEFAAPDSAYTSN 77