BLASTX nr result

ID: Ophiopogon21_contig00039076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00039076
         (372 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    54   7e-09
emb|CBI17142.3| unnamed protein product [Vitis vinifera]               47   5e-06
ref|XP_011624386.1| PREDICTED: cellulose synthase-like protein H...    45   6e-06
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...    50   7e-06

>ref|XP_010244415.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC104588258 [Nelumbo nucifera]
          Length = 2014

 Score = 53.9 bits (128), Expect(2) = 7e-09
 Identities = 24/52 (46%), Positives = 36/52 (69%)
 Frame = +2

Query: 104 RSAHIMCPRRE*FNTYKAVEGELILMENDAACRIVSIGNICMEMHDGQERTL 259
           R ++ MCP +   +TY+  +G ++LM N+AAC++VS G I + MHDG  RTL
Sbjct: 676 RCSYHMCPNKSALSTYENFDGGVVLMGNNAACKVVSKGTIQVHMHDGVVRTL 727



 Score = 32.7 bits (73), Expect(2) = 7e-09
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 258 SNV*HVPDLKKFFLLLRALEALGCKFSSEG 347
           + V +VPDLKK  + L  L++ GC++S+EG
Sbjct: 728 NEVRNVPDLKKNLISLGTLDSSGCRYSAEG 757


>emb|CBI17142.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score = 47.0 bits (110), Expect(2) = 5e-06
 Identities = 19/47 (40%), Positives = 31/47 (65%)
 Frame = +2

Query: 119 MCPRRE*FNTYKAVEGELILMENDAACRIVSIGNICMEMHDGQERTL 259
           MCPRR+ F++Y+ V G  +++ ++  C +V IG + + M DG  RTL
Sbjct: 1   MCPRRDWFSSYQEVNGGKVILGSNMNCSMVGIGTVAINMFDGMTRTL 47



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 270 HVPDLKKFFLLLRALEALGCKFSSE 344
           HVPDLK+  + L +L+  GC F +E
Sbjct: 52  HVPDLKRNLISLGSLDESGCNFKAE 76


>ref|XP_011624386.1| PREDICTED: cellulose synthase-like protein H1 [Amborella
           trichopoda]
          Length = 923

 Score = 44.7 bits (104), Expect(2) = 6e-06
 Identities = 19/50 (38%), Positives = 32/50 (64%)
 Frame = +2

Query: 110 AHIMCPRRE*FNTYKAVEGELILMENDAACRIVSIGNICMEMHDGQERTL 259
           ++ M P R+ F TYK+++   +LM ND A + + +G   ++M+DG  RTL
Sbjct: 707 SNYMYPHRDWFTTYKSIDSGSVLMGNDTAWKTIGVGTSTIKMYDGVVRTL 756



 Score = 32.0 bits (71), Expect(2) = 6e-06
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 258 SNV*HVPDLKKFFLLLRALEALGCKFSSEG 347
           ++V H+PDLKK  + L  L++  CKF  EG
Sbjct: 757 TDVRHIPDLKKNLISLGTLDSNDCKFVGEG 786


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1138

 Score = 49.7 bits (117), Expect(2) = 7e-06
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +2

Query: 101 TRSAHIMCPRRE*FNTYKAVEGELILMENDAACRIVSIGNICMEMHDGQERTL 259
           T   + MCP R+ F TY+AV+G  +LM +D  C +  IG + ++M DG  RTL
Sbjct: 246 TACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTL 298



 Score = 26.6 bits (57), Expect(2) = 7e-06
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 258 SNV*HVPDLKKFFLLLRALEALGCKFS 338
           S+V H P+LK+  + LR L+  G K+S
Sbjct: 299 SDVRHFPNLKRSLISLRTLDRKGYKYS 325


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