BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00038426
         (531 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF97943.1| retrotransposon protein, putative, Ty3-gypsy subc...    60   5e-07
gb|AAO73216.1| retrotransposon protein, putative, Ty3-gypsy sub-...    60   5e-07
gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subc...    57   5e-06

>gb|ABF97943.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1202

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%)
 Frame = +3

Query: 270 KPPLPGMQRAFNAALRGAGCGQAYNLTTEAERSNDVVAGKVSVNSVPIMPLFDSGASHCF 449
           +PP+  +Q+A  A  +    G  +N   EA+ + +VV G   VNSVP   LFDSGA+H F
Sbjct: 614 RPPMAPVQQAAPAPPKP---GAGFNCAEEAQAAPEVVLGTFPVNSVPATVLFDSGATHSF 670

Query: 450 ISSRFVSMHSIHCTKLDNAWKIST 521
           IS +FV +H +   KL    ++ T
Sbjct: 671 ISKQFVGIHGLIREKLSTPMRVHT 694


>gb|AAO73216.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|31712104|gb|AAP68408.1|
           putative polyprotein [Oryza sativa Japonica Group]
          Length = 1185

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%)
 Frame = +3

Query: 270 KPPLPGMQRAFNAALRGAGCGQAYNLTTEAERSNDVVAGKVSVNSVPIMPLFDSGASHCF 449
           +PP+  +Q+A  A  +    G  +N   EA+ + +VV G   VNSVP   LFDSGA+H F
Sbjct: 614 RPPMAPVQQAAPAPPKP---GAGFNCAEEAQAAPEVVLGTFPVNSVPATVLFDSGATHSF 670

Query: 450 ISSRFVSMHSIHCTKLDNAWKIST 521
           IS +FV +H +   KL    ++ T
Sbjct: 671 ISKQFVGIHGLIREKLSTPMRVHT 694


>gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1197

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 28/56 (50%), Positives = 35/56 (62%)
 Frame = +3

Query: 354 EAERSNDVVAGKVSVNSVPIMPLFDSGASHCFISSRFVSMHSIHCTKLDNAWKIST 521
           EA  + +VV G  SVNSVP   LFDSGA+H FIS +FV MH +   KL    ++ T
Sbjct: 281 EARAAPEVVLGTFSVNSVPATVLFDSGATHSFISKKFVGMHGLRKEKLSTPMRVHT 336