BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00037531
         (390 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    53   1e-09

>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 53.1 bits (126), Expect(2) = 1e-09
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
 Frame = +1

Query: 91  RMGVFLSFSRGVKGFKVWDSIDKKIVISRYVILDKAPIL----KPSSSQQVGIRTDKI-- 252
           + GVF+ +  GVKGF++W   +K++++SR V+ D++P+L    KP+++ + G    ++  
Sbjct: 658 KKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESPLLRTIVKPTTTSETGSLDKQVEF 717

Query: 253 ------SQWVESDVASQSPCRYVSV--ELPSEVTQNMNQTDDRTI 363
                 S   E +   Q P     +   +PS++ Q++ Q   R +
Sbjct: 718 QVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRV 762



 Score = 35.8 bits (81), Expect(2) = 1e-09
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 18  YEMLRIFGCLAYYQVSDDKLNSRGKNG 98
           Y  L+ FGC AYY VS+ KL  R K G
Sbjct: 634 YSNLKAFGCTAYYHVSEGKLEPRAKKG 660