BLASTX nr result

ID: Ophiopogon21_contig00037439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00037439
         (494 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix ...    71   3e-10
ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis g...    69   1e-09
ref|XP_009420281.1| PREDICTED: DNA repair protein UVH3 isoform X...    68   3e-09
ref|XP_009420278.1| PREDICTED: DNA repair protein UVH3 isoform X...    68   3e-09

>ref|XP_008797066.1| PREDICTED: DNA repair protein UVH3 [Phoenix dactylifera]
          Length = 1467

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 44/91 (48%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
 Frame = -3

Query: 414  PQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPAINSAEKDSA-AGDRYSSALDRQPVH 238
            P+ SLSRD LL GGGFC D ++AQGDA +P  S    SA KD    G+  +S LD     
Sbjct: 1307 PENSLSRDSLLRGGGFCADKNDAQGDAFQPGDSQMQGSAGKDEDWVGE--ASGLDYGKES 1364

Query: 237  PTSLYDGSHSKDYRLTGGAFRMDESEIQGDA 145
            P     G+ S DY  +GG F MDES +QG+A
Sbjct: 1365 PLK---GNFSGDYLHSGGGFCMDESNLQGEA 1392


>ref|XP_010942436.1| PREDICTED: DNA repair protein UVH3 [Elaeis guineensis]
          Length = 1567

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -3

Query: 405  SLSRDYLLSGGGFCTDASEAQGDALRPAASPAINSAEKDSA-AGDRYSSALDRQPVHPTS 229
            SLSRDYLL GGGFC D S+ QG A +P      +SA KD    G+  ++ LD     P  
Sbjct: 1410 SLSRDYLLRGGGFCADRSDEQGGAFQPGDGQMQDSAGKDEDWVGE--AAGLDCGKESPLK 1467

Query: 228  LYDGSHSKDYRLTGGAFRMDESEIQGDATHVDAG 127
               G+ S DY  +GG F MDES++QG+A    AG
Sbjct: 1468 ---GNLSNDYLRSGGGFCMDESDLQGEAIQPAAG 1498


>ref|XP_009420281.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Musa acuminata subsp.
            malaccensis]
          Length = 1534

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 46/116 (39%), Positives = 62/116 (53%)
 Frame = -3

Query: 489  VEQSSSTRIGPTGDASNHKEGRSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPA 310
            +E  + +R+G   D S+  +G     + S S +YL SGGGFC D +  QGDA++ AASP 
Sbjct: 1397 IENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQGDAIQLAASPI 1453

Query: 309  INSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDAT 142
              SAE D           DR      +L D + S+ Y  +GG F MDES+ Q DAT
Sbjct: 1454 QGSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESDEQVDAT 1499


>ref|XP_009420278.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
            malaccensis] gi|695063542|ref|XP_009420279.1| PREDICTED:
            DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
            malaccensis] gi|695063544|ref|XP_009420280.1| PREDICTED:
            DNA repair protein UVH3 isoform X1 [Musa acuminata subsp.
            malaccensis]
          Length = 1576

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 46/116 (39%), Positives = 62/116 (53%)
 Frame = -3

Query: 489  VEQSSSTRIGPTGDASNHKEGRSCSPQVSLSRDYLLSGGGFCTDASEAQGDALRPAASPA 310
            +E  + +R+G   D S+  +G     + S S +YL SGGGFC D +  QGDA++ AASP 
Sbjct: 1397 IENDNRSRVG---DLSDVDKGAHTFSKDSSSGEYLFSGGGFCLDDNVLQGDAIQLAASPI 1453

Query: 309  INSAEKDSAAGDRYSSALDRQPVHPTSLYDGSHSKDYRLTGGAFRMDESEIQGDAT 142
              SAE D           DR      +L D + S+ Y  +GG F MDES+ Q DAT
Sbjct: 1454 QGSAEMDRE---------DRDGCKQHALEDDT-SRGYLFSGGGFCMDESDEQVDAT 1499


Top