BLASTX nr result

ID: Ophiopogon21_contig00036705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00036705
         (428 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    43   6e-07
emb|CDP17739.1| unnamed protein product [Coffea canephora]             43   6e-07
emb|CDP17738.1| unnamed protein product [Coffea canephora]             40   1e-06

>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 42.7 bits (99), Expect(2) = 6e-07
 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = +2

Query: 8   RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145
           RLGH  ++SL+ L ++GL++GT  CK E  EH    K + VKFG  IH
Sbjct: 363 RLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIH 410



 Score = 37.4 bits (85), Expect(2) = 6e-07
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +1

Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318
           +T  + + VH D+   +K   + G  Y V+FVD++SR   +  MK++N+   IF+ W   
Sbjct: 411 NTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAE 470

Query: 319 IELQIGR 339
           +E   GR
Sbjct: 471 VENHTGR 477


>emb|CDP17739.1| unnamed protein product [Coffea canephora]
          Length = 435

 Score = 43.1 bits (100), Expect(2) = 6e-07
 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
 Frame = +2

Query: 8   RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145
           RLGH  ++SL+ L ++GL++GT  CK E  EH   +K + VKFG  IH
Sbjct: 57  RLGHAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIH 104



 Score = 37.0 bits (84), Expect(2) = 6e-07
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +1

Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318
           +T  + + VH ++   +K   L G  Y V+F+D++SR   +  MK ++E   IF+ W   
Sbjct: 105 NTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKAR 164

Query: 319 IELQIGR 339
           +E Q GR
Sbjct: 165 VENQTGR 171


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 39.7 bits (91), Expect(2) = 1e-06
 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = +2

Query: 8   RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145
           RLG   ++SL+ L ++GL++GT  CK E  EH   +K + VKFG  IH
Sbjct: 449 RLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIH 496



 Score = 39.3 bits (90), Expect(2) = 1e-06
 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
 Frame = +1

Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318
           +T  + + VH D+   +K   L G  Y V+F+D++SR   +  MK ++E  +IF+ W   
Sbjct: 497 NTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKAR 556

Query: 319 IELQIGR 339
           +E Q GR
Sbjct: 557 VENQTGR 563


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