BLASTX nr result
ID: Ophiopogon21_contig00036705
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon21_contig00036705 (428 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 43 6e-07 emb|CDP17739.1| unnamed protein product [Coffea canephora] 43 6e-07 emb|CDP17738.1| unnamed protein product [Coffea canephora] 40 1e-06 >emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 813 Score = 42.7 bits (99), Expect(2) = 6e-07 Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +2 Query: 8 RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145 RLGH ++SL+ L ++GL++GT CK E EH K + VKFG IH Sbjct: 363 RLGHAGEKSLQILTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIH 410 Score = 37.4 bits (85), Expect(2) = 6e-07 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +1 Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318 +T + + VH D+ +K + G Y V+FVD++SR + MK++N+ IF+ W Sbjct: 411 NTKGILDYVHSDVWGPAKTPSIGGRHYFVTFVDDFSRRVWVFTMKNKNDVLEIFLKWKAE 470 Query: 319 IELQIGR 339 +E GR Sbjct: 471 VENHTGR 477 >emb|CDP17739.1| unnamed protein product [Coffea canephora] Length = 435 Score = 43.1 bits (100), Expect(2) = 6e-07 Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 2/48 (4%) Frame = +2 Query: 8 RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145 RLGH ++SL+ L ++GL++GT CK E EH +K + VKFG IH Sbjct: 57 RLGHAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIH 104 Score = 37.0 bits (84), Expect(2) = 6e-07 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +1 Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318 +T + + VH ++ +K L G Y V+F+D++SR + MK ++E IF+ W Sbjct: 105 NTKGILDYVHSNVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEVLEIFLKWKAR 164 Query: 319 IELQIGR 339 +E Q GR Sbjct: 165 VENQTGR 171 >emb|CDP17738.1| unnamed protein product [Coffea canephora] Length = 798 Score = 39.7 bits (91), Expect(2) = 1e-06 Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Frame = +2 Query: 8 RLGHTAQESLRALVRRGLVEGT-TCKTESYEHYAWDK-KMVKFGAFIH 145 RLG ++SL+ L ++GL++GT CK E EH +K + VKFG IH Sbjct: 449 RLGDAGEKSLQNLAKQGLLKGTKVCKLEFCEHCVLEKQRKVKFGTGIH 496 Score = 39.3 bits (90), Expect(2) = 1e-06 Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Frame = +1 Query: 145 STVRLHEIVHIDIKEHSKVALLEGMCYIVSFVDEYSRHT*I-AMKHRNEAKRIFM-WIRC 318 +T + + VH D+ +K L G Y V+F+D++SR + MK ++E +IF+ W Sbjct: 497 NTKGILDYVHSDVWGPAKTPSLGGRYYFVTFIDDFSRRVWVFTMKSKDEMLKIFLKWKAR 556 Query: 319 IELQIGR 339 +E Q GR Sbjct: 557 VENQTGR 563