BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00036624
         (408 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      76   6e-20
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      72   6e-19
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 72   6e-19
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                72   6e-19
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...    71   1e-18
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    73   1e-18
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    70   2e-18
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    70   2e-18
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    70   4e-18
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    72   4e-18
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    72   4e-18
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      69   4e-18
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]    73   5e-18
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    68   9e-18
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      69   2e-17
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]         68   2e-17
emb|CAA31653.1| polyprotein [Arabidopsis thaliana]                     69   3e-17
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...    70   3e-17
ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    63   7e-17
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]          63   3e-16

>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 76.3 bits (186), Expect(2) = 6e-20
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCED--PXXXXXXXXXXX 126
            C L+KSLYGLKQS R   K F+T+M KI +TRC+YD CVY    ED              
Sbjct: 926  CRLKKSLYGLKQSPRQWYKPFDTYMLKIGYTRCQYDCCVYYHVFEDGKVILLLLYVDDML 985

Query: 125  XXVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
               +DM  I+++K +L  EFDM D  A  KI G+EI RD ++
Sbjct: 986  IACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNA 1027



 Score = 47.8 bits (112), Expect(2) = 6e-20
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            E+E MDV   FLH +LEE I M QPEG++  G+EN V   K SL+
Sbjct: 889  EIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVCRLKKSLY 933


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 71.6 bits (174), Expect(2) = 6e-19
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 869  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLI 928

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 929  AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 969



 Score = 48.9 bits (115), Expect(2) = 6e-19
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 832 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 876


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 71.6 bits (174), Expect(2) = 6e-19
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 886  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLI 945

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 946  AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 986



 Score = 48.9 bits (115), Expect(2) = 6e-19
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 849 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 893


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 71.6 bits (174), Expect(2) = 6e-19
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 718  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLI 777

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 778  AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 818



 Score = 48.9 bits (115), Expect(2) = 6e-19
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 681 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 725


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 983

 Score = 70.9 bits (172), Expect(2) = 1e-18
 Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YD+CVY+K  +               
Sbjct: 702  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDNCVYLKVVDGSAIYLLLYVDDMLI 761

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 762  AAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 802



 Score = 48.9 bits (115), Expect(2) = 1e-18
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 665 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 709


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1175

 Score = 73.2 bits (178), Expect(2) = 1e-18
 Identities = 45/101 (44%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L++SLYGLKQS R   K F++FM    F R ++DSCVYIK     P            
Sbjct: 803  CKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNVSPIYLLLYVDDMLI 862

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              K    I  +K QL  EFDM D +A  KI GMEI+RD +S
Sbjct: 863  AAKSKEQITTLKKQLSSEFDMKDLDAAKKILGMEITRDRNS 903



 Score = 46.2 bits (108), Expect(2) = 1e-18
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE +DV   FLH ELEE+I M QPEG+I  G+E+ V   K SL+
Sbjct: 766 ELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLY 810


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1262

 Score = 70.1 bits (170), Expect(2) = 2e-18
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 933  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVNDMLI 992

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 993  AAKDKLEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERRS 1033



 Score = 48.9 bits (115), Expect(2) = 2e-18
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 896  ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 940


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
            gi|20087076|gb|AAM10749.1|AC112514_2 Putative
            retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 70.1 bits (170), Expect(2) = 2e-18
 Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 896  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVNDMLI 955

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 956  AAKDKLEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERRS 996



 Score = 48.9 bits (115), Expect(2) = 2e-18
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 859 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 903


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 70.5 bits (171), Expect(2) = 4e-18
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 1167 CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYLKVVDGSAIYLLLYVDDMLI 1226

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R   S
Sbjct: 1227 AAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHS 1267



 Score = 47.4 bits (111), Expect(2) = 4e-18
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE MDV   FLH ELEE I M+QP+G++  G+EN V   K SL+
Sbjct: 1130 ELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLY 1174


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score = 71.6 bits (174), Expect(2) = 4e-18
 Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L++SLYGLKQS R   K F++FM    F R ++DSCVYIK     P            
Sbjct: 950  CKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLLYVDDMLI 1009

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              K    I  +K QL  EFDM D  A  KI GMEI+RD +S
Sbjct: 1010 AAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNS 1050



 Score = 46.2 bits (108), Expect(2) = 4e-18
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE +DV   FLH ELEE+I M QPEG+I  G+E+ V   K SL+
Sbjct: 913  ELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLY 957


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1278

 Score = 71.6 bits (174), Expect(2) = 4e-18
 Identities = 45/101 (44%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L++SLYGLKQS R   K F++FM    F R ++DSCVYIK     P            
Sbjct: 950  CKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSPIYLLLYVDDILI 1009

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              K    I  +K QL  EFDM D  A  KI GMEI+RD +S
Sbjct: 1010 AAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDKNS 1050



 Score = 46.2 bits (108), Expect(2) = 4e-18
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE +DV   FLH ELEE+I M QPEG+I  G+E+ V   K SL+
Sbjct: 913  ELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLY 957


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 69.3 bits (168), Expect(2) = 4e-18
 Identities = 43/99 (43%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
 Frame = -2

Query: 293  LQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXXXV 117
            L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +                 
Sbjct: 841  LKKSLYGLKQSPRQWYKRFDSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLLYVDDMLIAA 900

Query: 116  KDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
            KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 901  KDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 939



 Score = 48.5 bits (114), Expect(2) = 4e-18
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 802 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVYRLKKSLY 846


>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
          Length = 595

 Score = 73.2 bits (178), Expect(2) = 5e-18
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
 Frame = -2

Query: 299 CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCEDP---XXXXXXXXXX 129
           C L+KSLYGLKQS R   K F++++ +I + RC+YD  VY+K  +D              
Sbjct: 305 CKLRKSLYGLKQSPRQWYKCFDSYIIRIGYKRCEYDCFVYVKSLDDDSSFIFLLLYVDDM 364

Query: 128 XXXVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
               K M  + ++KS L KEFDM + +A  KI GMEI RD +S
Sbjct: 365 LIAAKSMVEVNKLKSLLSKEFDMKELDAAKKIIGMEIHRDRAS 407



 Score = 44.3 bits (103), Expect(2) = 5e-18
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           +LE MDV   FLH +LEE + M QPEG+I+ G+E+ V   + SL+
Sbjct: 268 QLEQMDVETTFLHGDLEELVYMVQPEGFIQPGQEHLVCKLRKSLY 312


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group] gi|22655747|gb|AAN04164.1| Putative
            retrotransposon protein [Oryza sativa Japonica Group]
            gi|31431214|gb|AAP53029.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1229

 Score = 68.2 bits (165), Expect(2) = 9e-18
 Identities = 44/101 (43%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L++SLYGLKQS R   K F++FM    F R ++DSCVYIK                  
Sbjct: 896  CKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVNGSHIYLLLYVDDMLI 955

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              K    I  +K QL  EFDM D  A  KI GMEI+RD++S
Sbjct: 956  AAKSKEQITTLKKQLSSEFDMKDLVASKKILGMEITRDINS 996



 Score = 48.5 bits (114), Expect(2) = 9e-18
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE +DV  IFLH ELEE+I M QPEG+I  G+E+ V   K SL+
Sbjct: 859 ELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLY 903


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 68.6 bits (166), Expect(2) = 2e-17
 Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
            C L+KSLYGLKQS R   K F++FM    F    YDSCVY+K  +               
Sbjct: 932  CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRISNYDSCVYLKVVDGSVIYLLLYVDDMLI 991

Query: 122  XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
              KD   I ++K+QL  EF+M D  A  KI GMEI+R+  S
Sbjct: 992  AAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHS 1032



 Score = 47.0 bits (110), Expect(2) = 2e-17
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE M+V   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 895  ELEQMNVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 939


>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
          Length = 494

 Score = 68.2 bits (165), Expect(2) = 2e-17
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = -2

Query: 299 CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQC--EDPXXXXXXXXXXX 126
           CLL+KSLYGLKQS R   K F  FM   NF R ++D+CVY+KQ   +D            
Sbjct: 215 CLLKKSLYGLKQSPRQWNKRFSRFMIDQNFIRSEHDACVYVKQAGEQDHLYLLLYVDDML 274

Query: 125 XXVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRD 12
              K    I ++K QL  EF+M D     +I G++I RD
Sbjct: 275 IAGKSKSEINKVKEQLSMEFEMKDMGPASRILGIDIIRD 313



 Score = 47.4 bits (111), Expect(2) = 2e-17
 Identities = 25/45 (55%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE++ M+QP+G+I    ENKV   K SL+
Sbjct: 178 ELEQMDVKTAFLHGELEEELYMEQPDGFISEDGENKVCLLKKSLY 222


>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
          Length = 1291

 Score = 68.6 bits (166), Expect(2) = 3e-17
 Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQC--EDPXXXXXXXXXXX 126
            CLL+KSLYGLKQS R   K F  FM   NF R ++D+CVY+KQ   ++            
Sbjct: 990  CLLKKSLYGLKQSPRQWNKRFNRFMIDQNFIRSEHDACVYVKQVSEQEHLYLLLYVDDML 1049

Query: 125  XXVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
               K    I ++K QL  EF+M D     +I G++I RDM +
Sbjct: 1050 IAGKSKSEINKVKEQLSMEFEMKDMGPASRILGIDIIRDMKN 1091



 Score = 46.6 bits (109), Expect(2) = 3e-17
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE MDV   FLH ELEE++ M+QPEG I    ENKV   K SL+
Sbjct: 953  ELEQMDVKTAFLHGELEEELYMEQPEGCISEDGENKVCLLKKSLY 997


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
           gi|18542925|gb|AAL75759.1| Putative pol polyprotein
           [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1005

 Score = 70.5 bits (171), Expect(2) = 3e-17
 Identities = 43/100 (43%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
 Frame = -2

Query: 299 CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCEDPXXXXXXXXXXXXX 120
           C L++S YGLKQS R   K F+ FM    F R ++DSCVYIK                  
Sbjct: 634 CKLKRSFYGLKQSPRQWYKRFDLFMLSHGFKRSEFDSCVYIKFVNGSPIYLLYVDDMLIA 693

Query: 119 VKDMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRDMSS 3
            K    I  +K QL  EFDM D  A  KI GMEI+RD +S
Sbjct: 694 AKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNS 733



 Score = 44.3 bits (103), Expect(2) = 3e-17
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE +DV   FLH ELEE+I M QPEG+I  G+E  V   K S +
Sbjct: 597 ELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFY 641


>ref|XP_009107606.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103833265
            [Brassica rapa]
          Length = 3353

 Score = 63.2 bits (152), Expect(2) = 7e-17
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCEDPXXXXXXXXXXXXX 120
            CLL+KSLYGLKQS R     F+TFM+K  F +  YDSCVY++    P             
Sbjct: 915  CLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAIFLLLYVDDML 974

Query: 119  VK--DMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRD 12
            +   +   I+ +K +L +EF+M D     +I GM+I RD
Sbjct: 975  IASGNKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRD 1013



 Score = 63.2 bits (152), Expect(2) = 7e-17
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCEDPXXXXXXXXXXXXX 120
            CLL+KSLYGLKQS R     F+TFM+K  F +  YDSCVY++    P             
Sbjct: 1614 CLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAIFLLLYVDDML 1673

Query: 119  VK--DMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRD 12
            +   +   I+ +K +L +EF+M D     +I GM+I RD
Sbjct: 1674 IASGNKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRD 1712



 Score = 63.2 bits (152), Expect(2) = 7e-17
 Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = -2

Query: 299  CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCEDPXXXXXXXXXXXXX 120
            CLL+KSLYGLKQS R     F+TFM+K  F +  YDSCVY++    P             
Sbjct: 2990 CLLRKSLYGLKQSPRQWNLRFDTFMKKEKFIQSDYDSCVYMRNVNTPKAIFLLLYVDDML 3049

Query: 119  VK--DMGHIREIKSQLRKEFDM-DFEAVIKIFGMEISRD 12
            +   +   I+ +K +L +EF+M D     +I GM+I RD
Sbjct: 3050 IASGNKEEIQIMKDRLSREFEMKDLGKASRILGMDIIRD 3088



 Score = 50.4 bits (119), Expect(2) = 7e-17
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE +DV   FLH  L+E+I M QPEGY++ G+ENKV   + SL+
Sbjct: 878  ELEQLDVKTAFLHGNLDERILMDQPEGYVKPGDENKVCLLRKSLY 922



 Score = 50.4 bits (119), Expect(2) = 7e-17
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE +DV   FLH  L+E+I M QPEGY++ G+ENKV   + SL+
Sbjct: 1577 ELEQLDVKTAFLHGNLDERILMDQPEGYVKPGDENKVCLLRKSLY 1621



 Score = 50.4 bits (119), Expect(2) = 7e-17
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = -1

Query: 408  ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
            ELE +DV   FLH  L+E+I M QPEGY++ G+ENKV   + SL+
Sbjct: 2953 ELEQLDVKTAFLHGNLDERILMDQPEGYVKPGDENKVCLLRKSLY 2997


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score = 62.8 bits (151), Expect(2) = 3e-16
 Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = -2

Query: 299 CLLQKSLYGLKQSFRP*CKHFETFMEKINFTRCKYDSCVYIKQCE-DPXXXXXXXXXXXX 123
           C L+KSLYGLKQS R   K F++FM    F R  YDSCVY+K  +               
Sbjct: 346 CRLKKSLYGLKQSPRQWYKRFDSFMLSQKFRRSNYDSCVYVKVADGSAIYLLLYVDDMLI 405

Query: 122 XVKDMGHIREIKSQLRKEFDM-DFEAVIKIFGM 27
             KD   I ++K+QL  EF+M D  AV KI  +
Sbjct: 406 AAKDKSEIAKLKAQLSSEFEMKDLGAVKKILDL 438



 Score = 48.9 bits (115), Expect(2) = 3e-16
 Identities = 26/45 (57%), Positives = 31/45 (68%)
 Frame = -1

Query: 408 ELE*MDVVVIFLHCELEEKICMKQPEGYIR*GEENKVSSTKVSLW 274
           ELE MDV   FLH ELEE I M+QPEG++  G+EN V   K SL+
Sbjct: 309 ELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLY 353