BLASTX nr result

ID: Ophiopogon21_contig00036350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00036350
         (384 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008791090.1| PREDICTED: DNA topoisomerase 2-like [Phoenix...    60   5e-07
ref|XP_010920068.1| PREDICTED: DNA topoisomerase 2 [Elaeis guine...    60   6e-07
ref|XP_008779357.1| PREDICTED: DNA topoisomerase 2, partial [Pho...    59   1e-06

>ref|XP_008791090.1| PREDICTED: DNA topoisomerase 2-like [Phoenix dactylifera]
          Length = 896

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 49/125 (39%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
 Frame = -3

Query: 370  ANDADVDVGTTSTAMDAGNXXXXXXXXXXXXXXKDAAKKTTVVXXXXXXXXXL-KDRLAA 194
            AN++      TST  D GN              K  AKK  VV           KDRLAA
Sbjct: 633  ANNSSTVSDVTST--DTGNAPEASKPKPRGRTKKAPAKKAAVVESDEDEEVLALKDRLAA 690

Query: 193  YNLDSSPDKT-FMETESV-AQEVMKMKAPSKRATVRKGKSTMTISXXXXXXXXXXMPAIS 20
            YNLDSSPD++  METE+V +Q   + K PSKR T RK  ST              +P I 
Sbjct: 691  YNLDSSPDQSAAMETEAVLSQHEQRKKEPSKRTTARKAPSTTFTEISDGDDAEDDIPTIL 750

Query: 19   EDGDD 5
            ED D+
Sbjct: 751  EDDDE 755


>ref|XP_010920068.1| PREDICTED: DNA topoisomerase 2 [Elaeis guineensis]
          Length = 1486

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/127 (40%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
 Frame = -3

Query: 370  ANDADVDVGTTSTAMDAGNXXXXXXXXXXXXXXKDAAKKTTVVXXXXXXXXXL---KDRL 200
            AN++      TST  DAGN              K  AKK  VV         +   KDRL
Sbjct: 1209 ANNSSTVSDVTST--DAGNAPEASKPKPRGRAKKAPAKKVAVVESDEDDEEEVLALKDRL 1266

Query: 199  AAYNLDSSPD-KTFMETESV-AQEVMKMKAPSKRATVRKGKSTMTISXXXXXXXXXXMPA 26
            AAYNLDSSPD ++ METE+V +Q+  + K PSKR   RK  ST T            MP 
Sbjct: 1267 AAYNLDSSPDHQSAMETEAVLSQKEQRKKEPSKRTAARKAPSTFT-EISDGDDAEDDMPT 1325

Query: 25   ISEDGDD 5
            I ED DD
Sbjct: 1326 ILEDDDD 1332


>ref|XP_008779357.1| PREDICTED: DNA topoisomerase 2, partial [Phoenix dactylifera]
          Length = 1401

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 48/124 (38%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = -3

Query: 370  ANDADVDVGTTSTAMDAGNXXXXXXXXXXXXXXKDAAKKTTVVXXXXXXXXXL-KDRLAA 194
            AN++      TST  DAGN              K  AKK  VV           KDRLAA
Sbjct: 1125 ANNSSSISNVTST--DAGNAPEPSKLKARGGAKKAPAKKVMVVESDEDEEVLALKDRLAA 1182

Query: 193  YNLDSSPDKTFMETE-SVAQEVMKMKAPSKRATVRKGKSTMTISXXXXXXXXXXMPAISE 17
            YNLDSSPD++ ME E +++Q   + K PSKR  +RK  ST T            MP + E
Sbjct: 1183 YNLDSSPDQSAMEAEAALSQREHRKKEPSKRTALRKAPSTFT-EISDGDDVEDNMPIVGE 1241

Query: 16   DGDD 5
            D D+
Sbjct: 1242 DDDE 1245


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