BLASTX nr result

ID: Ophiopogon21_contig00036286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00036286
         (544 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEX93640.1| ATP synthase CF1 epsilon chain (chloroplast) [Eri...    45   1e-06
gb|AEX93623.1| ATP synthase CF1 epsilon chain (chloroplast) [Hem...    43   2e-06
gb|AEZ48895.1| ATP synthase CF1 epsilon subunit, partial (plasti...    43   5e-06
ref|YP_009180114.1| ATP synthase CF1 epsilon subunit (chloroplas...    43   5e-06
gb|AEX93622.1| ATP synthase CF1 epsilon chain (chloroplast) [Asp...    43   5e-06
gb|AEX93621.1| ATP synthase CF1 epsilon chain (chloroplast) [Asp...    43   5e-06

>gb|AEX93640.1| ATP synthase CF1 epsilon chain (chloroplast) [Eriospermum
           cervicorne]
          Length = 134

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP            NLSRA  +RQT+E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQKAQQALEIAEVNLSRAQGKRQTIEANLALRRARTRVEAVNVISQ 134



 Score = 34.3 bits (77), Expect(2) = 1e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND + ++
Sbjct: 62  LMGGFARISNNEITILGNDAEIST 85


>gb|AEX93623.1| ATP synthase CF1 epsilon chain (chloroplast) [Hemiphylacus
           alatostylus]
          Length = 134

 Score = 42.7 bits (99), Expect(2) = 2e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP           ANLSRA  +RQ +E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQEAQQALEIAEANLSRARGKRQAIEANLALRRARTRVEAVNVISQ 134



 Score = 35.4 bits (80), Expect(2) = 2e-06
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND Q ++
Sbjct: 62  LMGGFARISNNEITILGNDAQMST 85


>gb|AEZ48895.1| ATP synthase CF1 epsilon subunit, partial (plastid) [Nolina
           atopocarpa]
          Length = 134

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP           ANLSRA  +RQ +E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQEAQQALEIAEANLSRAQGKRQAIEANLALRRARTRVEAVNVISQ 134



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND + ++
Sbjct: 62  LMGGFARISNNEITILGNDAEMST 85


>ref|YP_009180114.1| ATP synthase CF1 epsilon subunit (chloroplast) [Polygonatum
           cyrtonema] gi|372479858|gb|AEX93638.1| ATP synthase CF1
           epsilon chain (chloroplast) [Beaucarnea hookeri]
           gi|372479860|gb|AEX93639.1| ATP synthase CF1 epsilon
           chain (chloroplast) [Dasylirion wheeleri]
           gi|372479864|gb|AEX93641.1| ATP synthase CF1 epsilon
           chain (chloroplast) [Liriope spicata]
           gi|372479866|gb|AEX93642.1| ATP synthase CF1 epsilon
           chain (chloroplast) [Ophiopogon japonicus]
           gi|372479872|gb|AEX93645.1| ATP synthase CF1 epsilon
           chain (chloroplast) [Maianthemum stellatum]
           gi|944543321|gb|ALL96511.1| ATP synthase CF1 epsilon
           subunit (chloroplast) [Polygonatum cyrtonema]
           gi|948549974|gb|ALM87753.1| ATP synthase CF1 epsilon
           subunit (chloroplast) [Polygonatum verticillatum]
          Length = 134

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP           ANLSRA  +RQ +E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQEAQQALEIAEANLSRAQGKRQAIEANLALRRARTRVEAVNVISQ 134



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND + ++
Sbjct: 62  LMGGFARISNNEITILGNDAEMST 85


>gb|AEX93622.1| ATP synthase CF1 epsilon chain (chloroplast) [Asparagus
           asparagoides]
          Length = 134

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP           ANLSRA  +RQ +E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQEAQQALEIAEANLSRAQGKRQAIEANLALRRARTRVEAVNVISQ 134



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND + ++
Sbjct: 62  LMGGFARISNNEITILGNDAEMST 85


>gb|AEX93621.1| ATP synthase CF1 epsilon chain (chloroplast) [Asparagus
           officinalis] gi|374411771|gb|AEZ48871.1| ATP synthase
           CF1 epsilon subunit, partial (plastid) [Asparagus
           officinalis]
          Length = 134

 Score = 42.7 bits (99), Expect(2) = 5e-06
 Identities = 26/48 (54%), Positives = 29/48 (60%)
 Frame = -3

Query: 452 IDPXXXXXXXXXXXANLSRA*NERQTLEVNVALE*ART*VETVNVISQ 309
           IDP           ANLSRA  +RQ +E N+AL  ART VE VNVISQ
Sbjct: 87  IDPQDAQQALEIAEANLSRAQGKRQAIEANLALRRARTRVEAVNVISQ 134



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 14/24 (58%), Positives = 19/24 (79%)
 Frame = -1

Query: 523 LMGGFIGISNNDTTIIGNDVQATS 452
           LMGGF  ISNN+ TI+GND + ++
Sbjct: 62  LMGGFARISNNEITILGNDAEMST 85


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