BLASTX nr result
ID: Ophiopogon21_contig00035475
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon21_contig00035475 (489 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis] 97 4e-18 gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin... 87 4e-15 >gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis] Length = 926 Score = 97.4 bits (241), Expect = 4e-18 Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 7/169 (4%) Frame = -2 Query: 488 VLSKYQCGIQTPKPSVLDRLAIXXXXXXXXXXRTCQKKTASEREYLEVTSNVTSAGKHHI 309 VLS+ C I P+ SV DRL QKK SE EY +VT N+TS GK Sbjct: 298 VLSECHCCISEPRRSVFDRLTDVARPTKRRR----QKKKVSEVEYPQVTINMTSRGKAPC 353 Query: 308 PXXXXXXXXXSPGVKELRDKFDGVYHHTRTKTGAIPLVNYKQLAE*REIDDEHXXXXXXX 129 P SP V+E+ D+F+GVY HTR++TGAI VNY++LA+ DEH Sbjct: 354 PSSDESERSHSPTVREICDEFEGVYRHTRSRTGAIRPVNYQKLAQGITTSDEHSAIAESQ 413 Query: 128 XXXXXXXXXXSTNMTGVLEDVARKLDE-------QQATINELRIMMAQL 3 S MTG ED+A+++DE QQ T+ +++ M+AQL Sbjct: 414 SSSSIGAQKVSVYMTGNPEDIAKRVDEHHVMLQAQQETLLQVKDMLAQL 462 >gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis] Length = 869 Score = 87.4 bits (215), Expect = 4e-15 Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 7/169 (4%) Frame = -2 Query: 488 VLSKYQCGIQTPKPSVLDRLAIXXXXXXXXXXRTCQKKTASEREYLEVTSNVTSAGKHHI 309 VLS+ C TP+ SV DRL R C+KKTA E EY +VT N+ GK Sbjct: 355 VLSECPCCAPTPRQSVFDRLT--NVVRPAKRQRRCRKKTA-EAEYPQVTINMIGQGKASH 411 Query: 308 PXXXXXXXXXSPGVKELRDKFDGVYHHTRTKTGAIPLVNYKQLAE*REIDDEHXXXXXXX 129 P V+E+ D+F+GVY +TRT+TGAI VNY++LA+ DEH Sbjct: 412 TDSDESQESHPPTVREICDQFEGVYQNTRTRTGAIRPVNYQKLAKRITTSDEHSAIAESQ 471 Query: 128 XXXXXXXXXXSTNMTGVLEDVARKLDE-------QQATINELRIMMAQL 3 S TG ED+ +++DE QQ T+ +L+ M+AQL Sbjct: 472 SSSSVGAREVSAYTTGNHEDITKRVDEHHVMLQAQQETLLQLKDMLAQL 520