BLASTX nr result

ID: Ophiopogon21_contig00035475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00035475
         (489 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]     97   4e-18
gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officin...    87   4e-15

>gb|ABD63135.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 926

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
 Frame = -2

Query: 488 VLSKYQCGIQTPKPSVLDRLAIXXXXXXXXXXRTCQKKTASEREYLEVTSNVTSAGKHHI 309
           VLS+  C I  P+ SV DRL               QKK  SE EY +VT N+TS GK   
Sbjct: 298 VLSECHCCISEPRRSVFDRLTDVARPTKRRR----QKKKVSEVEYPQVTINMTSRGKAPC 353

Query: 308 PXXXXXXXXXSPGVKELRDKFDGVYHHTRTKTGAIPLVNYKQLAE*REIDDEHXXXXXXX 129
           P         SP V+E+ D+F+GVY HTR++TGAI  VNY++LA+     DEH       
Sbjct: 354 PSSDESERSHSPTVREICDEFEGVYRHTRSRTGAIRPVNYQKLAQGITTSDEHSAIAESQ 413

Query: 128 XXXXXXXXXXSTNMTGVLEDVARKLDE-------QQATINELRIMMAQL 3
                     S  MTG  ED+A+++DE       QQ T+ +++ M+AQL
Sbjct: 414 SSSSIGAQKVSVYMTGNPEDIAKRVDEHHVMLQAQQETLLQVKDMLAQL 462


>gb|ABD63158.1| hypothetical protein 20.t00010 [Asparagus officinalis]
          Length = 869

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
 Frame = -2

Query: 488 VLSKYQCGIQTPKPSVLDRLAIXXXXXXXXXXRTCQKKTASEREYLEVTSNVTSAGKHHI 309
           VLS+  C   TP+ SV DRL            R C+KKTA E EY +VT N+   GK   
Sbjct: 355 VLSECPCCAPTPRQSVFDRLT--NVVRPAKRQRRCRKKTA-EAEYPQVTINMIGQGKASH 411

Query: 308 PXXXXXXXXXSPGVKELRDKFDGVYHHTRTKTGAIPLVNYKQLAE*REIDDEHXXXXXXX 129
                      P V+E+ D+F+GVY +TRT+TGAI  VNY++LA+     DEH       
Sbjct: 412 TDSDESQESHPPTVREICDQFEGVYQNTRTRTGAIRPVNYQKLAKRITTSDEHSAIAESQ 471

Query: 128 XXXXXXXXXXSTNMTGVLEDVARKLDE-------QQATINELRIMMAQL 3
                     S   TG  ED+ +++DE       QQ T+ +L+ M+AQL
Sbjct: 472 SSSSVGAREVSAYTTGNHEDITKRVDEHHVMLQAQQETLLQLKDMLAQL 520


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