BLASTX nr result
ID: Ophiopogon21_contig00035459
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00035459
(471 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008806372.1| PREDICTED: putative ribonuclease H protein A... 94 3e-27
ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355... 82 3e-26
ref|XP_010462981.1| PREDICTED: uncharacterized protein LOC104743... 94 3e-26
ref|XP_013704633.1| PREDICTED: uncharacterized protein LOC106408... 89 4e-26
ref|XP_013745364.1| PREDICTED: uncharacterized protein LOC106447... 79 6e-26
ref|XP_010513002.1| PREDICTED: uncharacterized protein LOC104788... 95 1e-25
ref|XP_008791119.1| PREDICTED: uncharacterized protein LOC103708... 84 1e-25
ref|XP_008801646.1| PREDICTED: uncharacterized protein LOC103715... 89 1e-25
ref|XP_008795217.1| PREDICTED: putative ribonuclease H protein A... 90 1e-25
ref|XP_008800872.1| PREDICTED: uncharacterized protein LOC103715... 92 4e-25
ref|XP_010681283.1| PREDICTED: uncharacterized protein LOC104896... 86 5e-25
ref|XP_008776564.1| PREDICTED: uncharacterized protein LOC103696... 82 5e-25
ref|XP_008794416.1| PREDICTED: uncharacterized protein LOC103710... 85 6e-25
ref|XP_009137133.1| PREDICTED: uncharacterized protein LOC103861... 85 1e-24
ref|XP_008798809.1| PREDICTED: putative ribonuclease H protein A... 94 2e-24
ref|XP_013617764.1| PREDICTED: uncharacterized protein LOC106324... 82 2e-24
ref|XP_009140393.1| PREDICTED: uncharacterized protein LOC103864... 83 2e-24
gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thali... 82 2e-24
pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2)... 82 2e-24
ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359... 83 3e-24
>ref|XP_008806372.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
dactylifera]
Length = 752
Score = 94.0 bits (232), Expect(3) = 3e-27
Identities = 42/89 (47%), Positives = 62/89 (69%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D+ILLAQE++ ++ +AVK+DM++ YD +RWDFL L FGFH ++
Sbjct: 65 RSISDNILLAQEMMGDLQQASRRRCLMAVKLDMERAYDRIRWDFLRRALESFGFHQIWID 124
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W++ C+ PSFSILVNG+P+ +F + +GL
Sbjct: 125 WVLGCVQGPSFSILVNGTPSPFFRATRGL 153
Score = 43.5 bits (101), Expect(3) = 3e-27
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK+VAK LV R++ LL +IS+EQGAFV GRS
Sbjct: 35 YKVVAKLLVGRMRALLPSMISMEQGAFVGGRS 66
Score = 31.2 bits (69), Expect(3) = 3e-27
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -1
Query: 453 WKSTFLALIPKIMNPSTVGEFRPISL 376
W++T++ L+PK + + G +RPISL
Sbjct: 5 WQTTYITLLPKRQDAAEPGHYRPISL 30
>ref|XP_013651180.1| PREDICTED: uncharacterized protein LOC106355849 [Brassica napus]
Length = 1321
Score = 82.0 bits (201), Expect(3) = 3e-26
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACG-HVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R+I D++L+ E+LH ++ K +AVK DM K YD L WDF+E +L R GFH ++
Sbjct: 521 RAIADNVLITHEVLHFLKTSKAEKRVAMAVKTDMSKAYDRLEWDFIECVLQRLGFHQKWI 580
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WIM C+ ++S L+NGSP ++G+
Sbjct: 581 AWIMQCVSTVTYSFLINGSPRGRVTPSRGI 610
Score = 42.7 bits (99), Expect(3) = 3e-26
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP + T + LIPK+ NP TVGE+RPI+L
Sbjct: 455 GVLPERINDTHIRLIPKVQNPQTVGEYRPIAL 486
Score = 40.4 bits (93), Expect(3) = 3e-26
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
V YKI++K L R+KPLL +IS Q AFV GR+
Sbjct: 489 VYYKIISKILTKRLKPLLSGIISENQSAFVPGRA 522
>ref|XP_010462981.1| PREDICTED: uncharacterized protein LOC104743622 [Camelina sativa]
Length = 596
Score = 94.0 bits (232), Expect(3) = 3e-26
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWK-IACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R I D++L+A E+LHS+R K A ++AVK D+ K YD + W FLE +L+ GFH ++
Sbjct: 125 RYITDNVLIAHEVLHSLRVRKRCATSYMAVKTDISKAYDRIEWSFLEEVLIHKGFHTTWI 184
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
KWIMSC+ + SFS+++NGSP F +G+
Sbjct: 185 KWIMSCVRSVSFSVIINGSPYGSFRPTRGI 214
Score = 37.0 bits (84), Expect(3) = 3e-26
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V+YKI++K L R+K +L V+S Q AF+ GR
Sbjct: 93 VTYKIISKILTKRLKSVLPNVVSESQAAFIPGR 125
Score = 34.3 bits (77), Expect(3) = 3e-26
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G + +W T L LIPKI P + + RPISL
Sbjct: 59 GIMQNEWNHTNLCLIPKITEPKAMKDLRPISL 90
>ref|XP_013704633.1| PREDICTED: uncharacterized protein LOC106408393 [Brassica napus]
Length = 1708
Score = 89.0 bits (219), Expect(3) = 4e-26
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMR-NWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
RSI D++L+A E++H +R N +A+K DM K YD + WDFLEA+ ++ GFH ++
Sbjct: 896 RSISDNLLIAHEMVHGLRTNTSCKSDFIAIKTDMSKAYDRVEWDFLEALFIKLGFHSKWI 955
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WIMSCI + S+SIL+NG + +G+
Sbjct: 956 SWIMSCIRSVSYSILLNGPSYGYIKPQRGI 985
Score = 39.3 bits (90), Expect(3) = 4e-26
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP W T L+L+PK+ NP+ + + RPISL
Sbjct: 830 GQLPADWNFTELSLLPKVQNPNQMKDLRPISL 861
Score = 36.6 bits (83), Expect(3) = 4e-26
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
V YKIV+K L + +K ++ ++S+ QGAFV GRS
Sbjct: 864 VVYKIVSKVLCDHLKLVIPLIVSLTQGAFVAGRS 897
>ref|XP_013745364.1| PREDICTED: uncharacterized protein LOC106447969 [Brassica napus]
Length = 1230
Score = 79.3 bits (194), Expect(3) = 6e-26
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIA--CGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDF 95
R+I D++L+ E+LH ++ K C +AVK DM K YD L W+F+ +L R GFH +
Sbjct: 499 RAIADNVLITHEVLHYLKTSKAEKRCA-MAVKTDMSKAYDRLEWEFIRLVLQRMGFHEKW 557
Query: 94 VKWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
+ WIM CI + +++ L+NGSP ++G+
Sbjct: 558 IHWIMECISSVTYAFLINGSPRGRVKPSRGI 588
Score = 45.1 bits (105), Expect(3) = 6e-26
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G+LPP+ TF+ LIPKI NP TV ++RPI+L
Sbjct: 433 GSLPPKINETFIRLIPKIKNPRTVADYRPIAL 464
Score = 40.0 bits (92), Expect(3) = 6e-26
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
V YKI++K L R++PLL +IS Q AFV GR+
Sbjct: 467 VYYKIISKILTKRLRPLLSSIISENQSAFVPGRA 500
>ref|XP_010513002.1| PREDICTED: uncharacterized protein LOC104788940 [Camelina sativa]
Length = 1347
Score = 94.7 bits (234), Expect(3) = 1e-25
Identities = 41/90 (45%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMR-NWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R I D++L+A E+LHS++ + A ++AVK D+ K YD + W FLEA+L++ GFHP ++
Sbjct: 517 RFITDNVLIAHEVLHSLKVRQRCANSYMAVKTDISKAYDRVEWRFLEAVLIKKGFHPTWI 576
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
KWIM C+ SFS+L+NGS +F ++G+
Sbjct: 577 KWIMGCVETVSFSVLINGSTYGYFRPSRGI 606
Score = 37.4 bits (85), Expect(3) = 1e-25
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V+YKI++K L R+K +L +V+S Q AF+ GR
Sbjct: 485 VTYKIISKILTKRLKQVLSEVVSETQAAFIPGR 517
Score = 31.6 bits (70), Expect(3) = 1e-25
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G + +W T L LIPK +P T+ +FRPI+L
Sbjct: 452 GEMQQEWNHTNLCLIPK-NDPKTMKDFRPIAL 482
>ref|XP_008791119.1| PREDICTED: uncharacterized protein LOC103708118 [Phoenix
dactylifera]
Length = 1071
Score = 84.3 bits (207), Expect(3) = 1e-25
Identities = 37/89 (41%), Positives = 59/89 (66%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
R+I ++LLAQE++ ++ +A+K+DM++ YD++RW FL+ L + FH ++
Sbjct: 508 RNISHNVLLAQEMMWDLQRASKRRSLMAIKLDMERAYDMIRWRFLQQALEAYDFHRQWIG 567
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WIM C+ P FSILVNG+P+ +F S GL
Sbjct: 568 WIMGCVRGPRFSILVNGTPSPFFESIMGL 596
Score = 43.5 bits (101), Expect(3) = 1e-25
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK+VA+ +V R+KPLL +IS EQGAF+ GR+
Sbjct: 478 YKVVARIMVRRMKPLLPGIISQEQGAFIAGRN 509
Score = 35.8 bits (81), Expect(3) = 1e-25
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -1
Query: 465 LPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
+P WK+TF+ LIPK + FRPISL
Sbjct: 444 MPDDWKATFITLIPKRQEAAEPDHFRPISL 473
>ref|XP_008801646.1| PREDICTED: uncharacterized protein LOC103715697 [Phoenix
dactylifera]
Length = 1203
Score = 89.4 bits (220), Expect(3) = 1e-25
Identities = 37/89 (41%), Positives = 60/89 (67%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D++L+AQE ++ + + +K+DM++ YD L WDF++ FGFH +++
Sbjct: 407 RSITDNVLIAQEFMYDLGRAPRRRSLMGIKLDMERAYDRLSWDFVQHSFQSFGFHETWIR 466
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W+M C+ PSF+ILVNG+P+ +F S+ GL
Sbjct: 467 WVMGCVRGPSFAILVNGTPSHFFESSVGL 495
Score = 37.4 bits (85), Expect(3) = 1e-25
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK AK L R++ +L ++IS EQGAFV GRS
Sbjct: 377 YKATAKILAVRLRDILPRLISPEQGAFVAGRS 408
Score = 36.6 bits (83), Expect(3) = 1e-25
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -1
Query: 453 WKSTFLALIPKIMNPSTVGEFRPISL 376
W+ TF+ALIPK +P+ G +RPISL
Sbjct: 347 WQRTFVALIPKRQDPTEPGHYRPISL 372
>ref|XP_008795217.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
dactylifera]
Length = 804
Score = 90.1 bits (222), Expect(3) = 1e-25
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D+ILLAQE++ ++ +AVK+DM++ YD +RWDFL L FGFH ++
Sbjct: 65 RSISDNILLAQEMMGDLQRAPRRRCLMAVKLDMERAYDRIRWDFLRWALESFGFHQTWID 124
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WI C+ P FSILVNG+P+ +F ++ GL
Sbjct: 125 WIFGCVQGPRFSILVNGTPSPFFRASLGL 153
Score = 40.4 bits (93), Expect(3) = 1e-25
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YKIVA+ + R+K L+ +IS EQGAFV GRS
Sbjct: 35 YKIVARIMAGRMKALMPSIISQEQGAFVGGRS 66
Score = 32.7 bits (73), Expect(3) = 1e-25
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -1
Query: 453 WKSTFLALIPKIMNPSTVGEFRPISL 376
W++T++ L+PK + S G +RPISL
Sbjct: 5 WQATYITLVPKRQDASEPGHYRPISL 30
>ref|XP_008800872.1| PREDICTED: uncharacterized protein LOC103715119 [Phoenix
dactylifera]
Length = 1049
Score = 91.7 bits (226), Expect(3) = 4e-25
Identities = 40/89 (44%), Positives = 61/89 (68%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D++L+AQE + + + + VK+DM++ YD +RWDF++ L FG H +++
Sbjct: 189 RSISDNVLIAQEFMFDLSRAPMRRSLMGVKLDMERAYDRMRWDFVQQSLRLFGVHETWIR 248
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W MSCI PSF++LVNGSP+ +F S+ GL
Sbjct: 249 WAMSCIRGPSFALLVNGSPSRFFSSSGGL 277
Score = 36.6 bits (83), Expect(3) = 4e-25
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK+ K L R++ +L ++IS EQGAF++GRS
Sbjct: 159 YKVTTKILAIRLRGVLPRLISPEQGAFLEGRS 190
Score = 33.5 bits (75), Expect(3) = 4e-25
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -1
Query: 456 QWKSTFLALIPKIMNPSTVGEFRPISL 376
+W+ TF+ALIPK + + FRPISL
Sbjct: 128 EWQRTFIALIPKRQDATEPSHFRPISL 154
>ref|XP_010681283.1| PREDICTED: uncharacterized protein LOC104896266 [Beta vulgaris
subsp. vulgaris]
Length = 1144
Score = 86.3 bits (212), Expect(3) = 5e-25
Identities = 41/90 (45%), Positives = 57/90 (63%)
Frame = -3
Query: 271 DRSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
DR I D+IL+A E+ HS G +A+K+DM+K YD L W+F+ L + GF +V
Sbjct: 504 DRFIQDNILIAHEVFHSFHKKSGVDGWLAIKLDMEKAYDRLEWNFILVSLKKLGFCSRWV 563
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WI SCI PSFS+LVNG P + F ++G+
Sbjct: 564 DWIRSCISTPSFSVLVNGIPGKRFTPSRGI 593
Score = 38.9 bits (89), Expect(3) = 5e-25
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G L + TFLALIPK+ NPS+ FRPISL
Sbjct: 439 GHLLKEINHTFLALIPKVDNPSSTNHFRPISL 470
Score = 36.2 bits (82), Expect(3) = 5e-25
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
YK+V+K L NR+K +L K+I QGAFV R
Sbjct: 475 YKVVSKILTNRLKSVLGKIIHPLQGAFVPDR 505
>ref|XP_008776564.1| PREDICTED: uncharacterized protein LOC103696659 [Phoenix
dactylifera]
Length = 757
Score = 82.0 bits (201), Expect(3) = 5e-25
Identities = 36/89 (40%), Positives = 57/89 (64%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D++++AQ+++ +R +A+K+DM++ YD ++W FL L GFH ++
Sbjct: 527 RSISDNVMVAQKMIWDLRRAPKRRSLMAIKLDMERAYDRIKWSFLRLALESLGFHETWIG 586
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W M C+ +P FSIL+NGSP+ F S GL
Sbjct: 587 WAMGCVRSPWFSILINGSPSPLFSSMMGL 615
Score = 42.4 bits (98), Expect(3) = 5e-25
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK+VA+ L++R+KP L +I EQGAFV GRS
Sbjct: 497 YKVVARILMDRVKPFLSGIICQEQGAFVGGRS 528
Score = 37.0 bits (84), Expect(3) = 5e-25
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = -1
Query: 465 LPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
+P WK+TF+ LIPK + S FRPISL
Sbjct: 463 MPDDWKATFVTLIPKRADASEPSHFRPISL 492
>ref|XP_008794416.1| PREDICTED: uncharacterized protein LOC103710479 [Phoenix
dactylifera]
Length = 1252
Score = 84.7 bits (208), Expect(3) = 6e-25
Identities = 37/89 (41%), Positives = 60/89 (67%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
R+I D++L+AQE + + + + VK+DM++ YD + W+FL L FGFH +++
Sbjct: 439 RNISDNVLIAQEFMFDLVKAPMRRCLMGVKLDMERAYDRMCWEFLRHSLQSFGFHEVWIR 498
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W+M C+M SFSILVNG+P+ +F ++ GL
Sbjct: 499 WVMGCVMGTSFSILVNGTPSPFFQTSVGL 527
Score = 40.8 bits (94), Expect(3) = 6e-25
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -1
Query: 465 LPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
+ P+W+ TF+ALIPK N + G FRPISL
Sbjct: 375 MSPEWQRTFIALIPKRQNATEPGHFRPISL 404
Score = 35.4 bits (80), Expect(3) = 6e-25
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YKI AK L R++ +L +I EQGAF+ GR+
Sbjct: 409 YKITAKILAMRLRGILPSIICPEQGAFIGGRN 440
>ref|XP_009137133.1| PREDICTED: uncharacterized protein LOC103861184 [Brassica rapa]
Length = 957
Score = 84.7 bits (208), Expect(3) = 1e-24
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGH-VAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R I D++L+A E++H +R + +A+K DM K YD + WDFLEA+ + GFH ++
Sbjct: 133 RLISDNVLVAHEMVHGLRTNPLCKSEFIAIKTDMSKAYDRVEWDFLEALFQKLGFHQQWI 192
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WIM C+ + SFS+L+NG F KG+
Sbjct: 193 SWIMCCVRSVSFSVLLNGQSYGHFRPKKGI 222
Score = 38.1 bits (87), Expect(3) = 1e-24
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP W T + L+PK+ NP+ + + RPISL
Sbjct: 67 GQLPADWNFTEICLLPKVQNPNQMKDLRPISL 98
Score = 37.0 bits (84), Expect(3) = 1e-24
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V YKIV+K L +R+K +L ++S QGAFV GR
Sbjct: 101 VVYKIVSKILCDRLKIVLPHIVSPAQGAFVAGR 133
>ref|XP_008798809.1| PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix
dactylifera]
Length = 864
Score = 94.4 bits (233), Expect(3) = 2e-24
Identities = 41/89 (46%), Positives = 62/89 (69%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFVK 89
RSI D++L+AQE + + + + +K+DM++ YD +RWDFLE L FGFH +++
Sbjct: 108 RSISDNVLIAQEFMFDLGRAPVRGSLMGIKLDMERAYDRMRWDFLEQSLQGFGFHERWIR 167
Query: 88 WIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
W+M CI PSF+ILVNG+P+ +F S+ GL
Sbjct: 168 WVMGCIRIPSFAILVNGTPSRYFVSSGGL 196
Score = 34.7 bits (78), Expect(3) = 2e-24
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = -2
Query: 362 YKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
YK AK + R++ +L ++I EQGAF++GRS
Sbjct: 78 YKATAKIIAARLRVVLPRLIGPEQGAFLEGRS 109
Score = 30.4 bits (67), Expect(3) = 2e-24
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 453 WKSTFLALIPKIMNPSTVGEFRPISL 376
W+ TF+ LIPK + + +RPISL
Sbjct: 48 WQQTFITLIPKRQDATEPSHYRPISL 73
>ref|XP_013617764.1| PREDICTED: uncharacterized protein LOC106324322 [Brassica oleracea
var. oleracea]
Length = 1780
Score = 81.6 bits (200), Expect(3) = 2e-24
Identities = 37/90 (41%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMR-NWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R I D+I++A E++H +R + K+A G +A+K D+ K YD + W FLE +L R GF +V
Sbjct: 954 RIISDNIIIAHEMIHGLRTSTKVAEGWMAIKTDLSKAYDRVEWSFLEVLLERMGFDRVWV 1013
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
+WIM+C+ + SFS+L+NG+ +G+
Sbjct: 1014 RWIMACVSSVSFSVLLNGNSHGHIKPERGI 1043
Score = 40.0 bits (92), Expect(3) = 2e-24
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V YKI++K L NR+K +L ++I+ QGAFV GR
Sbjct: 922 VQYKIISKILCNRLKIILPEIIAETQGAFVSGR 954
Score = 37.4 bits (85), Expect(3) = 2e-24
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -1
Query: 465 LPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
+P W T ++L+PKI+NPS + + RPISL
Sbjct: 890 MPEGWNHTQISLLPKIVNPSLMKDMRPISL 919
>ref|XP_009140393.1| PREDICTED: uncharacterized protein LOC103864388 [Brassica rapa]
Length = 1377
Score = 83.2 bits (204), Expect(3) = 2e-24
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMR-NWKIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDFV 92
R I D++L+A E++H +R N +A+K DM K YD + WDFLEA+ L+ GFH +V
Sbjct: 552 RLISDNLLIAHEMVHGLRTNPACKSDFIAIKTDMSKAYDRVEWDFLEALFLKLGFHQRWV 611
Query: 91 KWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
WIM C+ + S+S+++NG F +G+
Sbjct: 612 SWIMLCVRSVSYSVILNGQSYGHFTPERGI 641
Score = 38.5 bits (88), Expect(3) = 2e-24
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP W T L L+PK+ NP+ + + RPISL
Sbjct: 486 GLLPVDWNYTELCLLPKVQNPNQMKDLRPISL 517
Score = 37.4 bits (85), Expect(3) = 2e-24
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V YKIV+K L +R+K +L ++S QGAFV GR
Sbjct: 520 VVYKIVSKVLCDRLKVVLPHIVSPAQGAFVAGR 552
>gb|AAB48347.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 82.0 bits (201), Expect(3) = 2e-24
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = -3
Query: 271 DRSIDDDILLAQEILHSMRNW-KIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDF 95
+R I D+IL+A E++HS+R I+ +A+K DM K YD + W FL A+LL GFH +
Sbjct: 99 ERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQRW 158
Query: 94 VKWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
V+WIM+C+ ++S+L+N P +GL
Sbjct: 159 VEWIMTCVSTVTYSVLINDQPYGLITPERGL 189
Score = 39.3 bits (90), Expect(3) = 2e-24
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V YKI++K +V R++PLL +++SV Q AFV R
Sbjct: 68 VLYKIISKVIVKRLQPLLPQIVSVNQSAFVSER 100
Score = 37.7 bits (86), Expect(3) = 2e-24
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP +W T L LIPK ++P+ + + RPISL
Sbjct: 34 GVLPVEWNFTHLCLIPKTIHPTEMVDLRPISL 65
>pir||S65819 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N2) - Arabidopsis
thaliana retrotransposon Ta24 (fragment)
Length = 184
Score = 82.0 bits (201), Expect(3) = 2e-24
Identities = 38/91 (41%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = -3
Query: 271 DRSIDDDILLAQEILHSMRNW-KIACGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDF 95
+R I D+IL+A E++HS+R I+ +A+K DM K YD + W FL A+LL GFH +
Sbjct: 93 ERLITDNILVAHELVHSLRTHPSISSEFMAIKSDMSKAYDRVEWSFLRALLLALGFHQRW 152
Query: 94 VKWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
V+WIM+C+ ++S+L+N P +GL
Sbjct: 153 VEWIMTCVSTVTYSVLINDQPYGLITPERGL 183
Score = 39.3 bits (90), Expect(3) = 2e-24
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGR 270
V YKI++K +V R++PLL +++SV Q AFV R
Sbjct: 62 VLYKIISKVIVKRLQPLLPQIVSVNQSAFVSER 94
Score = 37.7 bits (86), Expect(3) = 2e-24
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1
Query: 471 GTLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
G LP +W T L LIPK ++P+ + + RPISL
Sbjct: 28 GVLPVEWNFTHLCLIPKTIHPTEMVDLRPISL 59
>ref|XP_013654240.1| PREDICTED: uncharacterized protein LOC106359020 [Brassica napus]
Length = 2394
Score = 82.8 bits (203), Expect(3) = 3e-24
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Frame = -3
Query: 268 RSIDDDILLAQEILHSMRNWKIA--CGHVAVKVDMKKVYDLLRWDFLEAILLRFGFHPDF 95
R+I D++L+ E+LH ++ K C +AVK DM K YD L WDF+ A++ R GFHP +
Sbjct: 171 RAISDNVLITHEVLHFLKTSKAEQRCS-MAVKTDMSKAYDRLEWDFIRAVMQRLGFHPKW 229
Query: 94 VKWIMSCIMNPSFSILVNGSPTEWFHSNKGL 2
+ +IM C+ ++S L+NGSP ++G+
Sbjct: 230 INFIMQCVSTVTYSFLINGSPRGSVKPSRGI 260
Score = 38.9 bits (89), Expect(3) = 3e-24
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = -2
Query: 368 VSYKIVAKCLVNRIKPLLHKVISVEQGAFVQGRS 267
V YKI++K L R++P+L +IS Q AFV GR+
Sbjct: 139 VYYKIISKILTRRLQPILSSIISENQSAFVPGRA 172
Score = 37.0 bits (84), Expect(3) = 3e-24
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 468 TLPPQWKSTFLALIPKIMNPSTVGEFRPISL 376
T+ P+ T + LIPKI++P TV ++RPI+L
Sbjct: 106 TMQPKINETHVRLIPKILSPQTVADYRPIAL 136