BLASTX nr result

ID: Ophiopogon21_contig00034387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00034387
         (397 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010922813.1| PREDICTED: pentatricopeptide repeat-containi...    84   5e-14
ref|XP_008803027.1| PREDICTED: pentatricopeptide repeat-containi...    78   2e-12
ref|XP_008803028.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_009384758.1| PREDICTED: pentatricopeptide repeat-containi...    58   3e-06

>ref|XP_010922813.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           [Elaeis guineensis]
          Length = 501

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 43/90 (47%), Positives = 56/90 (62%)
 Frame = -3

Query: 272 TIYAPFVDNGTVSFTASLCQLLPKHSNKRCIMTWGSVNDQKVIEDWEDFLSTIHDKTLST 93
           T+  PFV N         C+  P H N R +MT  SVN+++V    E FLST+ D+T+ST
Sbjct: 140 TVCIPFVGNDFFPAATIECKFCPPHRNLRSVMTGVSVNEEEVTRALELFLSTVKDETVST 199

Query: 92  KELCSTYIKRLITSGNLSDAVYLFHYLHNR 3
           +E+CS YI+RL  SG LSDAV L   LH+R
Sbjct: 200 EEMCSIYIERLCRSGKLSDAVCLLRLLHDR 229


>ref|XP_008803027.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X1 [Phoenix dactylifera]
          Length = 386

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/86 (50%), Positives = 52/86 (60%)
 Frame = -3

Query: 260 PFVDNGTVSFTASLCQLLPKHSNKRCIMTWGSVNDQKVIEDWEDFLSTIHDKTLSTKELC 81
           PFV N  +       +  P H N R IMT  SV +++V   +E FLST  D+TLSTKE+C
Sbjct: 79  PFVGNDFLPSATIEYKFCPPHRNSRSIMTGVSVGEEEVTRAFELFLSTEKDETLSTKEIC 138

Query: 80  STYIKRLITSGNLSDAVYLFHYLHNR 3
           S YI+RL  SG LSDAV L   LH R
Sbjct: 139 SIYIERLCRSGKLSDAVCLLRLLHGR 164


>ref|XP_008803028.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           isoform X2 [Phoenix dactylifera]
          Length = 281

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/59 (57%), Positives = 41/59 (69%)
 Frame = -3

Query: 179 MTWGSVNDQKVIEDWEDFLSTIHDKTLSTKELCSTYIKRLITSGNLSDAVYLFHYLHNR 3
           MT  SV +++V   +E FLST  D+TLSTKE+CS YI+RL  SG LSDAV L   LH R
Sbjct: 1   MTGVSVGEEEVTRAFELFLSTEKDETLSTKEICSIYIERLCRSGKLSDAVCLLRLLHGR 59


>ref|XP_009384758.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11900
           [Musa acuminata subsp. malaccensis]
          Length = 391

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = -3

Query: 167 SVNDQKVIEDWEDFLSTIHDKTLSTKELCSTYIKRLITSGNLSDAVYLFHYLHNR 3
           SV  +  ++  E F+ST  D+++S KE+C+ YI++L  SGNLSDA YL  +LH+R
Sbjct: 69  SVEQENAMKALELFISTEKDESISVKEICTIYIEKLCRSGNLSDAAYLLRHLHSR 123


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