BLASTX nr result

ID: Ophiopogon21_contig00034363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00034363
         (351 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010921885.1| PREDICTED: DNA helicase INO80-like isoform X...    70   5e-10
ref|XP_010921883.1| PREDICTED: DNA helicase INO80-like isoform X...    70   5e-10
ref|XP_008811752.1| PREDICTED: DNA helicase INO80-like isoform X...    64   3e-08
ref|XP_008811751.1| PREDICTED: DNA helicase INO80-like isoform X...    64   3e-08
ref|XP_009412817.1| PREDICTED: DNA helicase INO80 [Musa acuminat...    60   5e-07

>ref|XP_010921885.1| PREDICTED: DNA helicase INO80-like isoform X3 [Elaeis guineensis]
          Length = 1257

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -3

Query: 349  KPRXXXXXXXXXNTTMEMDEPYPMGYDEDNKQ----RPKRPKKSVNENLEPTHTSAASTP 182
            KP+         +  +EMDEP P GY+    Q    RPKRP KSVNENLEP   S A T 
Sbjct: 1163 KPQNSLKTAKHADLPVEMDEPSPSGYEGQGMQQRLKRPKRPTKSVNENLEPAFNSTAGTL 1222

Query: 181  NMNSAEYYQQSPYEYSPHDYGGRPQ 107
              NS + YQ S YE++P DYG   Q
Sbjct: 1223 TTNSFQ-YQPSSYEFNPGDYGAGVQ 1246


>ref|XP_010921883.1| PREDICTED: DNA helicase INO80-like isoform X1 [Elaeis guineensis]
          Length = 1558

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 40/85 (47%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
 Frame = -3

Query: 349  KPRXXXXXXXXXNTTMEMDEPYPMGYDEDNKQ----RPKRPKKSVNENLEPTHTSAASTP 182
            KP+         +  +EMDEP P GY+    Q    RPKRP KSVNENLEP   S A T 
Sbjct: 1464 KPQNSLKTAKHADLPVEMDEPSPSGYEGQGMQQRLKRPKRPTKSVNENLEPAFNSTAGTL 1523

Query: 181  NMNSAEYYQQSPYEYSPHDYGGRPQ 107
              NS + YQ S YE++P DYG   Q
Sbjct: 1524 TTNSFQ-YQPSSYEFNPGDYGAGVQ 1547


>ref|XP_008811752.1| PREDICTED: DNA helicase INO80-like isoform X2 [Phoenix dactylifera]
          Length = 1502

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -3

Query: 301  EMDEPYPMGYD----EDNKQRPKRPKKSVNENLEPTHTSAASTPNMNSAEYYQQSPYEYS 134
            EMDEP   GY+    +   +R KRP KSVNENLEP   S AST  +NS+E Y+ S YE+S
Sbjct: 1423 EMDEPSASGYEGQVMQQRPKRLKRPTKSVNENLEPAFNSTASTLTINSSE-YRTSSYEFS 1481

Query: 133  PHDY 122
            P DY
Sbjct: 1482 PGDY 1485


>ref|XP_008811751.1| PREDICTED: DNA helicase INO80-like isoform X1 [Phoenix dactylifera]
          Length = 1558

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/64 (54%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
 Frame = -3

Query: 301  EMDEPYPMGYD----EDNKQRPKRPKKSVNENLEPTHTSAASTPNMNSAEYYQQSPYEYS 134
            EMDEP   GY+    +   +R KRP KSVNENLEP   S AST  +NS+E Y+ S YE+S
Sbjct: 1479 EMDEPSASGYEGQVMQQRPKRLKRPTKSVNENLEPAFNSTASTLTINSSE-YRTSSYEFS 1537

Query: 133  PHDY 122
            P DY
Sbjct: 1538 PGDY 1541


>ref|XP_009412817.1| PREDICTED: DNA helicase INO80 [Musa acuminata subsp. malaccensis]
          Length = 1555

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
 Frame = -3

Query: 304  MEMDEPYPMGYDEDN-----KQRPKRPKKSVNENLEPTHTSAASTPNMNSAEYYQQSPYE 140
            +E DEP P GY+ED+      +R +RP KS+NENLEP   SA + P MNS+E  Q + Y+
Sbjct: 1476 LETDEPSPSGYEEDHIVQERSKRLRRPTKSINENLEPAFNSADNVPIMNSSE-DQPTSYD 1534

Query: 139  YSPHDYGGRPQ 107
            Y    YG   Q
Sbjct: 1535 YKSGVYGSGSQ 1545


Top