BLASTX nr result
ID: Ophiopogon21_contig00033121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00033121
(668 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin... 114 9e-30
emb|CDP17738.1| unnamed protein product [Coffea canephora] 64 3e-19
gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 65 8e-13
emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera] 52 7e-11
ref|XP_011000402.1| PREDICTED: uncharacterized protein LOC105107... 63 1e-10
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 47 3e-10
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 47 3e-10
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 47 6e-10
gb|AJE29370.1| putative gag protein [Coffea canephora] 50 1e-09
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 50 7e-09
gb|AFB73912.1| polyprotein [Citrus sinensis] 45 9e-09
gb|AFB73911.1| polyprotein [Citrus sinensis] 45 9e-09
ref|XP_008807393.1| PREDICTED: uncharacterized protein LOC103719... 40 1e-08
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712... 39 1e-08
ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citr... 37 2e-08
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 47 3e-08
gb|KHN03674.1| Retrovirus-related Pol polyprotein from transposo... 53 4e-08
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 46 6e-08
ref|XP_010095912.1| Retrovirus-related Pol polyprotein from tran... 48 2e-07
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 47 3e-07
>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
Length = 1011
Score = 114 bits (284), Expect(3) = 9e-30
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+RFQ+ RG SL+ ++N +TKLL++LANVDEKI+DE K +IL SLP++EY TF+LTL+NG
Sbjct: 889 FRFQMSRGTSLAAYVNNYTKLLSNLANVDEKISDEYKTIILLGSLPDEEYDTFLLTLLNG 948
Query: 542 RSSLKFXXXXXXXXXXXXRRKDKQTAH-TASGEVLSTRGRSP 664
R S+ + RRKDK+T+H + SGE LSTRGRSP
Sbjct: 949 RPSISYSEITNALTNYDLRRKDKETSHASTSGEALSTRGRSP 990
Score = 38.5 bits (88), Expect(3) = 9e-30
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 235 KTYLAQDFWYDVMDETA-KTLWDYLSGKYKVKSVENHLQLKRRL 363
++ L Q+ YDV+ T+ +W+ L+ KY KSVEN L L RRL
Sbjct: 845 RSCLEQELKYDVIGVTSVMKMWEILNNKYLTKSVENRLHLLRRL 888
Score = 25.8 bits (55), Expect(3) = 9e-30
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 153 DVILSYERPDYIEERIWIRKNNLVCGV 233
+ I+ ERP E IW + N CGV
Sbjct: 817 ETIMVQERPPKYEVAIWEKMNRNTCGV 843
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 63.5 bits (153), Expect(3) = 3e-19
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+RF + G ++++H+ F +L+ADL N+D DED AL+L SSLP DE++ TL++G
Sbjct: 135 FRFDYQPGTTMNEHITIFNQLVADLLNLDVNFEDEDLALMLLSSLP-DEFEHLETTLLHG 193
Query: 542 RSSLKFXXXXXXXXXXXXRRKDKQTAHTASG-EVLSTRGR 658
+ ++ R++DK+ A+ E L RGR
Sbjct: 194 KENVSLDAVCSALYSRELRKQDKKKKKVAAADEALVARGR 233
Score = 52.8 bits (125), Expect(3) = 3e-19
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIWIRKNNLVCG 230
K+ V FDGT +FG+W+ EV D+L Q L D+ + ++ D IEE+ W N L CG
Sbjct: 34 KVAVETFDGTGHFGMWQGEVMDSLFQQGL-DIAIEEKKSDDIEEKEWSTINRLACG 88
Score = 26.2 bits (56), Expect(3) = 3e-19
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 235 KTYLAQDFWYDVMDET-AKTLWDYLSGKYKVKSVENHLQLKRRL 363
++ L+++ Y +ET A LW L GK+ KS +N L +K+ L
Sbjct: 91 RSCLSKEQKYAFKNETSAWKLWKALEGKFLKKSGQNKLLMKKIL 134
>gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris]
Length = 324
Score = 64.7 bits (156), Expect(3) = 8e-13
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+RF ++G +++ H+ F +L+A L N+D K DED AL+L SSLP DE++ TL++G
Sbjct: 88 FRFDYQQGTTMNAHITMFNQLVAYLLNLDVKFEDEDLALMLVSSLP-DEFEHLETTLLHG 146
Query: 542 RSSLKFXXXXXXXXXXXXRRKDK-QTAHTASGEVLSTRG 655
+ ++ R++DK +T T S E L TRG
Sbjct: 147 KDNVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVTRG 185
Score = 28.9 bits (63), Expect(3) = 8e-13
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 235 KTYLAQDFWYDVMDET-AKTLWDYLSGKYKVKSVENHLQLKRRL 363
++ L+++ Y V +ET A LW L K+ KS +N L +K+RL
Sbjct: 44 RSCLSREQKYVVKNETSAHKLWKALEDKFLKKSGQNKLLMKKRL 87
Score = 26.9 bits (58), Expect(3) = 8e-13
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 153 DVILSYERPDYIEERIWIRKNNLVCG 230
D+ + E+P +EE+ W N L CG
Sbjct: 16 DIAIEGEKPKEVEEKDWSIINRLACG 41
>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
Length = 950
Score = 52.4 bits (124), Expect(3) = 7e-11
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+ ++ G+ + DH+N F +++ DL V K+ +ED+A+IL SLP+ Y+ FV T++ G
Sbjct: 108 HTLKMSEGMQVRDHLNNFNRIILDLNGVGVKVEEEDQAMILLCSLPS-SYENFVDTMMYG 166
Query: 542 RSSL 553
R S+
Sbjct: 167 RBSI 170
Score = 30.8 bits (68), Expect(3) = 7e-11
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 54 TTHKIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVI 161
++ K +V KF+G+N+F LW+ +++ L+ Q I
Sbjct: 2 SSQKFEVEKFNGSNDFTLWKLKMKALLVQQKCAQAI 37
Score = 30.4 bits (67), Expect(3) = 7e-11
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 244 LAQDFWYDVMDET-AKTLWDYLSGKYKVKSVENHLQLKRRL 363
LA + +V DET A LW KY+ KS+ N L KR+L
Sbjct: 67 LADEVLREVADETTAVGLWRKFESKYQKKSLTNRLYQKRQL 107
>ref|XP_011000402.1| PREDICTED: uncharacterized protein LOC105107971 [Populus
euphratica]
Length = 450
Score = 63.2 bits (152), Expect(2) = 1e-10
Identities = 29/59 (49%), Positives = 45/59 (76%)
Frame = +2
Query: 359 DYRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLI 535
++ FQ K+G S+++H+N F K++ADL N+D +I DEDKAL+L +SLP D Y+ + TL+
Sbjct: 73 NFHFQHKKGTSINEHLNDFNKMIADLKNLDVEIDDEDKALLLLNSLP-DTYEHLITTLL 130
Score = 30.0 bits (66), Expect(2) = 1e-10
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 280 TAKTLWDYLSGKYKVKSVENHLQLKRR 360
+AK LW L K+ KS++N L LK+R
Sbjct: 46 SAKELWQALEDKFMKKSIDNCLYLKKR 72
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.0 bits (110), Expect(3) = 3e-10
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ S++DH+N L + L D KIA+ ++A +L SLP D Y ++ + N
Sbjct: 103 YTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLP-DSYDQLIINITNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTASGE---VLSTRGRS 661
+L F RRK+K+ +S + + TRGRS
Sbjct: 162 NITDTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRS 206
Score = 35.0 bits (79), Expect(3) = 3e-10
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 277 ETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
+TAK +WD L Y+VKS+ N + LKRRL
Sbjct: 74 KTAKEIWDTLIKLYEVKSLHNRIFLKRRL 102
Score = 29.3 bits (64), Expect(3) = 3e-10
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
K ++ KF+G NF LW+ ++R L N D I RP I + W
Sbjct: 4 KFEIEKFNG-RNFSLWKLKIRAILRKDNCLDAIDG--RPADITDEKW 47
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.0 bits (110), Expect(3) = 3e-10
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ S++DH+N L + L D KIA+ ++A +L SLP D Y ++ + N
Sbjct: 103 YTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLP-DSYDQLIINITNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTASGE---VLSTRGRS 661
+L F RRK+K+ +S + + TRGRS
Sbjct: 162 NIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRS 206
Score = 35.0 bits (79), Expect(3) = 3e-10
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 277 ETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
+TAK +WD L Y+VKS+ N + LKRRL
Sbjct: 74 KTAKEIWDTLIKLYEVKSLHNRIFLKRRL 102
Score = 29.3 bits (64), Expect(3) = 3e-10
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
K ++ KF+G NF LW+ ++R L N D I RP I + W
Sbjct: 4 KFEIEKFNG-RNFSLWKLKIRAILRKDNCLDAIDG--RPADITDEKW 47
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.4 bits (111), Expect(3) = 6e-10
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y Q+ S++DH+N L + L D KIA ++A +L SLP D Y ++ + N
Sbjct: 103 YTLQMGESTSVTDHINTLNTLFSQLTASDFKIAKNERAELLLQSLP-DSYDQLIINITNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTASGE---VLSTRGRS 661
+L F RRK+K+ +S + + TRGRS
Sbjct: 162 NIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRS 206
Score = 35.0 bits (79), Expect(3) = 6e-10
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 277 ETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
+TAK +WD L Y+VKS+ N + LKRRL
Sbjct: 74 KTAKEIWDTLIKLYEVKSLHNRIFLKRRL 102
Score = 28.1 bits (61), Expect(3) = 6e-10
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVI 161
K ++ KF+G NF LW+ ++R L N D I
Sbjct: 4 KFEIEKFNG-RNFSLWKLKIRAILRKDNCLDAI 35
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 50.4 bits (119), Expect(3) = 1e-09
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ G SL DHMN F +L L V I +E+KAL+L + + +D Y++ V TL+ G
Sbjct: 111 YALKMVEGGSLMDHMNTFNGILDQLQKVGVDIEEENKALLLLTPV-SDSYESVVTTLLYG 169
Query: 542 RSSLKFXXXXXXXXXXXXRRKDKQ 613
+ +L+F +RK Q
Sbjct: 170 KDTLEFENVQSSLLDHEKQRKANQ 193
Score = 30.4 bits (67), Expect(3) = 1e-09
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 KTYLAQDFWYDVMDE--TAKTLWDYLSGKYKVKSVENHLQLKRR 360
+ Y+A + +V+DE +A LW L Y KS+ N L LKR+
Sbjct: 66 RLYVADNIINNVIDEKDSAADLWKKLEKLYLAKSLSNKLHLKRQ 109
Score = 28.9 bits (63), Expect(3) = 1e-09
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 57 THKIDVVKFDGTNNFGLWRCEVRDALMAQNL 149
T + + F+GT +F LW+ V+D L+ Q L
Sbjct: 5 TIQFPIQPFNGTTSFTLWQRRVKDVLVQQGL 35
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 50.4 bits (119), Expect(3) = 7e-09
Identities = 31/99 (31%), Positives = 53/99 (53%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y F+++ S++D+++ F K++ +++N+ K+ DEDKA+++ SLP Y F T+ G
Sbjct: 108 YGFKMQEDRSIADNLDDFAKIVLEMSNIGIKVDDEDKAVLVLKSLPG-LYSNFKETMKYG 166
Query: 542 RSSLKFXXXXXXXXXXXXRRKDKQTAHTASGEVLSTRGR 658
R +L K K ++GE LS RGR
Sbjct: 167 RKTLTLEEVQSALRSKELELKKK----GSNGEGLSIRGR 201
Score = 28.1 bits (61), Expect(3) = 7e-09
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVI 161
K ++ +F G N+F +WR ++ L Q + D +
Sbjct: 5 KSEIERFIGKNDFNVWRMRMKAILFQQGVKDAL 37
Score = 28.1 bits (61), Expect(3) = 7e-09
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 274 DETAKTLWDYLSGKYKVKSVENHLQLKRRL-SFPIEE 381
+ TAK +W+ L Y S+ N L LK RL F ++E
Sbjct: 78 ETTAKGVWNKLEQLYMQNSLSNRLYLKERLYGFKMQE 114
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 45.4 bits (106), Expect(3) = 9e-09
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ ++DH+N L + L + I + ++A +L SLP D Y ++ L N
Sbjct: 103 YTLRMAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLP-DSYDQLIINLTNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTAS--GEVLS-TRGRS 661
SL F RRK+K+ +S E LS TRGRS
Sbjct: 162 NPVDSLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRS 206
Score = 32.7 bits (73), Expect(3) = 9e-09
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 280 TAKTLWDYLSGKYKVKSVENHLQLKRRL 363
TAK +WD L+ Y+ KS+ N + LKR+L
Sbjct: 75 TAKEIWDTLTKLYEAKSLHNKIFLKRKL 102
Score = 28.1 bits (61), Expect(3) = 9e-09
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
K ++ KF+G NNF LW+ +++ L N I ERP I + W
Sbjct: 4 KYEIEKFNG-NNFSLWKMKMKAVLRKNNCLAAI--GERPMEITDDKW 47
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 45.4 bits (106), Expect(3) = 9e-09
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ ++DH+N L + L + I + ++A +L SLP D Y ++ L N
Sbjct: 103 YTLRMAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLP-DSYDQLIINLTNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTAS--GEVLS-TRGRS 661
SL F RRK+K+ +S E LS TRGRS
Sbjct: 162 NPVESLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRS 206
Score = 32.7 bits (73), Expect(3) = 9e-09
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 280 TAKTLWDYLSGKYKVKSVENHLQLKRRL 363
TAK +WD L+ Y+ KS+ N + LKR+L
Sbjct: 75 TAKEIWDTLTKLYEAKSLHNKIFLKRKL 102
Score = 28.1 bits (61), Expect(3) = 9e-09
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
K ++ KF+G NNF LW+ +++ L N I ERP I + W
Sbjct: 4 KYEIEKFNG-NNFSLWKMKMKAVLRKNNCLAAI--GERPMEITDDKW 47
>ref|XP_008807393.1| PREDICTED: uncharacterized protein LOC103719778 [Phoenix
dactylifera]
Length = 510
Score = 40.4 bits (93), Expect(3) = 1e-08
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ G L H+ F ++ + + ++D KI +ED L+L SLP Y + TL+ G
Sbjct: 435 YSLRMPEGGYLISHIQKFNQVCSKVMSLDVKIEEEDGTLLLLCSLPG-SYDGLITTLVYG 493
Query: 542 RSSLKF 559
+ +L +
Sbjct: 494 KETLNY 499
Score = 35.8 bits (81), Expect(3) = 1e-08
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +3
Query: 78 KFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
KFDG NF LW+ V+D L+ Q + V++ ERP I W
Sbjct: 339 KFDGKENFTLWQQRVKDLLVQQKIYKVLVR-ERPKMISLEDW 379
Score = 30.0 bits (66), Expect(3) = 1e-08
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 274 DETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
+ TAK LW+ L Y KS+ N L LK++L
Sbjct: 405 ETTAKGLWERLENTYMGKSMTNKLWLKKQL 434
>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix
dactylifera]
Length = 2199
Score = 38.5 bits (88), Expect(3) = 1e-08
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ G L H+ F ++ +++ ++D +I +ED L+L SLP Y + TL+
Sbjct: 489 YSLRMPEGGDLISHIQKFNQVCSEIMSLDVQIVEEDMTLLLLYSLPG-SYDGLITTLVYR 547
Query: 542 RSSLKF 559
+ +L +
Sbjct: 548 KETLNY 553
Score = 36.2 bits (82), Expect(3) = 1e-08
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERPDYIEERIW 203
K D KFDG NF LW+ V+D L+ Q + V++ +RP I W
Sbjct: 388 KADFEKFDGKGNFILWQQRVKDLLIQQRIYKVLVK-KRPKKISIEDW 433
Score = 31.2 bits (69), Expect(3) = 1e-08
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 271 MDETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
++ TAK LW+ L Y KS+ N L LK++L
Sbjct: 458 LETTAKELWERLENTYMGKSMTNKLWLKKQL 488
>ref|XP_006432011.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
gi|557534133|gb|ESR45251.1| hypothetical protein
CICLE_v10003098mg [Citrus clementina]
Length = 182
Score = 37.4 bits (85), Expect(3) = 2e-08
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+ ++ G + DH++ ++ +L + KI D DKAL L SLP YK + TL+ G
Sbjct: 86 HTLRMTEGTKIFDHLSVLNGIVLELEAIGVKIEDGDKALRLLWSLPT-SYKHLLPTLMYG 144
Query: 542 RSSL 553
+ ++
Sbjct: 145 KETV 148
Score = 36.6 bits (83), Expect(3) = 2e-08
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILSYERP 179
K ++ KFDG NFGLW+ +V+D L+ L + P
Sbjct: 11 KFEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSP 49
Score = 31.2 bits (69), Expect(3) = 2e-08
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 277 ETAKTLWDYLSGKYKVKSVENHLQLKRR 360
+T K LW+ L Y+ KS+ N L LK R
Sbjct: 57 KTTKELWEKLEKLYRTKSISNRLYLKER 84
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 47.0 bits (110), Expect(3) = 3e-08
Identities = 30/99 (30%), Positives = 44/99 (44%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
+ ++ G L +H+ LL +L N+D KI DED ALIL SLP ++ FV + I G
Sbjct: 105 FGLRMAEGTQLREHLEQLNTLLLELRNIDVKIEDEDAALILLVSLPM-SFENFVQSFIVG 163
Query: 542 RSSLKFXXXXXXXXXXXXRRKDKQTAHTASGEVLSTRGR 658
+ ++ R K T+ L T R
Sbjct: 164 KDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSR 202
Score = 31.6 bits (70), Expect(3) = 3e-08
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 244 LAQDFWYDVMDE-TAKTLWDYLSGKYKVKSVENHLQLKRRL 363
LA D +V DE TA LW L Y KS+ N L LK+RL
Sbjct: 64 LADDVITEVSDEETAAGLWLKLESLYMTKSLTNKLLLKQRL 104
Score = 26.2 bits (56), Expect(3) = 3e-08
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 66 IDVVKFDGTNNFGLWRCEVRDALMAQ 143
+ + KF G N+F LW+ ++R L Q
Sbjct: 6 VKIDKFTGRNSFSLWQIKMRALLKQQ 31
>gb|KHN03674.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 130
Score = 52.8 bits (125), Expect(2) = 4e-08
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y+ +++ G L DH+N F L++ L N ++K +DE++AL+L SLP +K V T + G
Sbjct: 59 YQLKMEMGGDLHDHINKFNWLVSQLLNANDKFSDEEQALLLLVSLPR-SFKALVQTFLVG 117
Query: 542 RSSL 553
RS+L
Sbjct: 118 RSTL 121
Score = 32.3 bits (72), Expect(2) = 4e-08
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 244 LAQDFWYDVMDE-TAKTLWDYLSGKYKVKSVENHLQLKRRL 363
LA + ++V+ E T K LW+ L Y KS+ NHL LK L
Sbjct: 18 LAPEIRHNVLKEITPKALWEKLKNIYASKSLTNHLCLKMEL 58
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 45.8 bits (107), Expect(3) = 6e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +2
Query: 377 KRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLINGRSSL 553
KR SL H++ F K++ DL N+D K+ ED+A++L S LP Y F+ TL++G+ +L
Sbjct: 104 KRSYSL--HIDEFNKVILDLENIDIKVEKEDQAILLLSYLPK-VYDHFLETLLHGKQTL 159
Score = 30.8 bits (68), Expect(3) = 6e-08
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVI 161
K +V F G N+F LWR +++ L+ Q+L I
Sbjct: 5 KFEVDMFTGENSFSLWRIKIKSLLVHQSLTATI 37
Score = 26.9 bits (58), Expect(3) = 6e-08
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +1
Query: 241 YLAQDFWYDVMDET-AKTLWDYLSGKYKVKSVENHLQLKRR 360
+L + +V +ET A +W+ L Y +S+ N L LK+R
Sbjct: 65 FLGNEVLREVSEETTAVKVWERLEALYLKRSLANRLYLKKR 105
>ref|XP_010095912.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis] gi|587873315|gb|EXB62506.1|
Retrovirus-related Pol polyprotein from transposon TNT
1-94 [Morus notabilis]
Length = 358
Score = 48.1 bits (113), Expect(3) = 2e-07
Identities = 21/47 (44%), Positives = 34/47 (72%)
Frame = +2
Query: 353 RGDYRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSS 493
R + FQ+ G S+S+H++ F K++ DL N+D K+ DED+A+IL +S
Sbjct: 310 RRPHTFQMAPGKSISNHLDDFNKIILDLENIDVKVDDEDQAVILLTS 356
Score = 30.8 bits (68), Expect(3) = 2e-07
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 63 KIDVVKFDGTNNFGLWRCEVRDALMAQNLDDVILS 167
+ D+ KF +FGLWR ++R L+ Q L D + S
Sbjct: 211 RYDIEKFIEKIDFGLWRVKMRVLLVQQGLSDALRS 245
Score = 22.7 bits (47), Expect(3) = 2e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 274 DETAKTLWDYLSGKYKVKSVENHLQLKRR 360
D+T +W L +S+ + L LKRR
Sbjct: 283 DKTTAAVWQKLENLCMTRSLADRLFLKRR 311
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 47.0 bits (110), Expect(2) = 3e-07
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 362 YRFQLKRGVSLSDHMNAFTKLLADLANVDEKIADEDKALILSSSLPNDEYKTFVLTLING 541
Y ++ S++DH+N L + L D KIA+ ++A +L SLP D Y ++ + N
Sbjct: 103 YTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLP-DSYDQLIINITNN 161
Query: 542 R--SSLKFXXXXXXXXXXXXRRKDKQTAHTASGE---VLSTRGRS 661
+L F RRK+K+ +S + + TRGRS
Sbjct: 162 NIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRS 206
Score = 35.0 bits (79), Expect(2) = 3e-07
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 277 ETAKTLWDYLSGKYKVKSVENHLQLKRRL 363
+TAK +WD L Y+VKS+ N + LKRRL
Sbjct: 74 KTAKEIWDTLIKLYEVKSLHNRIFLKRRL 102