BLASTX nr result
ID: Ophiopogon21_contig00032698
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00032698
(381 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA99487.1| retrotransposon protein, putative, unclassified [... 80 5e-13
emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group] gi... 80 5e-13
ref|XP_008660139.1| PREDICTED: uncharacterized protein LOC103639... 78 3e-12
gb|AAX92720.1| retrotransposon protein, putative, unclassified [... 75 2e-11
ref|XP_008666641.1| PREDICTED: putative ribonuclease H protein A... 74 6e-11
dbj|BAH79979.1| putative unclassified retrotransposon protein [O... 73 7e-11
emb|CAN75564.1| hypothetical protein VITISV_032580 [Vitis vinifera] 73 7e-11
gb|ABF94719.1| retrotransposon protein, putative, unclassified [... 73 7e-11
gb|AAK52519.1|AC079128_2 Putative non-LTR retroelement reverse t... 73 7e-11
gb|AAN05341.1| Putative non-LTR retroelement reverse transcripta... 73 7e-11
ref|XP_008677984.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
ref|XP_008675553.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
ref|XP_008654536.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
ref|XP_008654535.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
ref|XP_008654531.1| PREDICTED: putative ribonuclease H protein A... 72 1e-10
ref|XP_010645576.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 72 2e-10
emb|CAN71170.1| hypothetical protein VITISV_022666 [Vitis vinifera] 71 3e-10
gb|AAP53939.1| retrotransposon protein, putative, unclassified [... 71 4e-10
dbj|BAS85450.1| Os03g0643433 [Oryza sativa Japonica Group] 70 5e-10
ref|XP_010656238.1| PREDICTED: uncharacterized protein LOC104880... 70 5e-10
>gb|ABA99487.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1627
Score = 80.5 bits (197), Expect = 5e-13
Identities = 45/94 (47%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Frame = +3
Query: 3 WQGPCLS-KGRLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
WQG L+ GR+ INS +SS+ LYM+S Y L VR++ID +++ ++ L
Sbjct: 1213 WQGKLLAIGGRVALINSSISSVPLYMMSLYSLPCGVREKIDFYRRRFLWQEDQGIRKYHL 1272
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQN 272
VKW +C PKD GG +LDL+ MNKALLGKWL N
Sbjct: 1273 VKWLVICLPKDQGGLGILDLDVMNKALLGKWLWN 1306
>emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa Japonica Group]
gi|38346911|emb|CAE03883.2| OSJNBb0015N08.11 [Oryza
sativa Japonica Group]
Length = 1026
Score = 80.5 bits (197), Expect = 5e-13
Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLS-KGRLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
WQG S GRL +NS LSS+ +YMISFY L V++RID K++ ++ L
Sbjct: 585 WQGRLQSIGGRLILLNSTLSSVPMYMISFYRLPKGVQERIDYFRKRFLWQEDQGIRKYHL 644
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
V W VC P+D GG VLDLE MNKA+LGKW+
Sbjct: 645 VNWPLVCSPRDQGGLGVLDLEAMNKAMLGKWI 676
>ref|XP_008660139.1| PREDICTED: uncharacterized protein LOC103639120 [Zea mays]
Length = 325
Score = 77.8 bits (190), Expect = 3e-12
Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 5/93 (5%)
Frame = +3
Query: 3 WQGPCLSK-GRLTFINSVLSSMSLYMISFYLLSVWVRKRIDK---KYSLGGEES-KGFSC 167
W+G L++ GRLT ++SVLSS+ Y ++ + L+VW RKRID+ + GEE+ G C
Sbjct: 129 WKGKWLNRAGRLTLVSSVLSSIPTYHLTVFPLAVWARKRIDRIRRSFLWKGEENANGGHC 188
Query: 168 LVKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
LV W V +PKDLGG + DL++ +AL +WL
Sbjct: 189 LVNWATVTRPKDLGGLGIPDLDKFGRALHLRWL 221
>gb|AAX92720.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|62701880|gb|AAX92953.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|77548739|gb|ABA91536.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group]
Length = 838
Score = 75.1 bits (183), Expect = 2e-11
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLS-KGRLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
WQG S GRL INS LSS+ +YMISF+ L V++++D +++ ++ L
Sbjct: 747 WQGKLQSIGGRLILINSSLSSVPMYMISFFKLPKGVKEKMDFFRRRFLWQEDQGIRKYHL 806
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
V+W +C P+D GG VLDL+ MNKALLGKW+
Sbjct: 807 VQWPIICSPRDQGGLGVLDLDIMNKALLGKWI 838
>ref|XP_008666641.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
Length = 476
Score = 73.6 bits (179), Expect = 6e-11
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Frame = +3
Query: 3 WQGPCLSK-GRLTFINSVLSSMSLYMISFYLLSVWVRKRIDK-KYSL---GGEESKGFSC 167
W+G L++ GRLT + SVLS+M Y +S + L W RKRID+ + S G ES G C
Sbjct: 82 WKGSMLNRAGRLTLMTSVLSAMPTYHLSVFPLVTWARKRIDRIRRSFLWRGKAESNGGHC 141
Query: 168 LVKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
LV W V KPK LGG +L+L++ + AL +WL
Sbjct: 142 LVAWPLVSKPKTLGGLGILNLDKFSCALRLRWL 174
>dbj|BAH79979.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 1283
Score = 73.2 bits (178), Expect = 7e-11
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RLT INSVLSS+ LYM+SF+ + V K++D ++ ++ K L
Sbjct: 1144 WKGKLLSTGGRLTLINSVLSSLPLYMMSFFAIPRGVLKKLDYFRSRFYWQCDDQKKKYRL 1203
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFIIS 284
KW +C+PK+ GG + DL+ N ALL KWL +++
Sbjct: 1204 TKWSIMCRPKEQGGLGIHDLDMKNIALLSKWLFKLLMT 1241
>emb|CAN75564.1| hypothetical protein VITISV_032580 [Vitis vinifera]
Length = 1191
Score = 73.2 bits (178), Expect = 7e-11
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDK---KYSLGGEESKGFSCL 170
W+ +SKG R+T I S L+SM +Y +S + + V +R++K + GG +G L
Sbjct: 48 WKRQYISKGGRVTLIKSTLASMPIYQMSIFRMPKVVARRLEKVQRDFLWGGRNMEGAIHL 107
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFIISLI*CDVSWLEVSIIRIE 335
VKW+ VCK KD GG + L +NKALLGKW+ + CD L +I+++
Sbjct: 108 VKWEVVCKDKDKGGLGLRKLAMLNKALLGKWIWRYA-----CDKDNLWKQVIKVK 157
>gb|ABF94719.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 581
Score = 73.2 bits (178), Expect = 7e-11
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDKKYSLGGEESKGFSC---L 170
W+G CLS G RL INSVLSS++++M+SF+ + + K++D S +S G L
Sbjct: 232 WKGKCLSVGGRLVLINSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQSDGHKRKYRL 291
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFI 278
+W +C PKD GG + +L NK LL KWL I
Sbjct: 292 ARWSVICTPKDCGGLGIQNLNVQNKCLLSKWLYKLI 327
>gb|AAK52519.1|AC079128_2 Putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group] gi|22711535|gb|AAN04510.1| Putative
non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 170
Score = 73.2 bits (178), Expect = 7e-11
Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Frame = +3
Query: 27 GRLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCLVKWKEVCKP 197
GRL +NS LSS+ +YM+SFY L V+ R+D K++ ++S LV W VC P
Sbjct: 75 GRLVLLNSSLSSVPMYMLSFYELPKGVKDRMDYFRKRFLWQEDQSIRKYHLVNWPLVCSP 134
Query: 198 KDLGGSCVLDLEEMNKALLGKWL 266
+D GG V+DLE MNKAL+G W+
Sbjct: 135 RDQGGLGVIDLEAMNKALVGNWI 157
>gb|AAN05341.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 603
Score = 73.2 bits (178), Expect = 7e-11
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDKKYSLGGEESKGFSC---L 170
W+G CLS G RL INSVLSS++++M+SF+ + + K++D S +S G L
Sbjct: 232 WKGKCLSVGGRLVLINSVLSSLAMFMLSFFEVPKGILKKLDYYRSRFFWQSDGHKRKYRL 291
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFI 278
+W +C PKD GG + +L NK LL KWL I
Sbjct: 292 ARWSVICTPKDCGGLGIQNLNVQNKCLLSKWLYKLI 327
>ref|XP_008677984.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
Length = 358
Score = 72.4 bits (176), Expect = 1e-10
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLSS+ LYM+SF+ + V K++D ++ ++ K L
Sbjct: 90 WKGKHLSYGGRLVLINSVLSSLPLYMLSFFEIPREVLKKVDYLRSRFFWQSDQQKKKFRL 149
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
KW +C+PKD+GG + +++ NK LL KWL
Sbjct: 150 AKWSILCQPKDIGGLGIKNIDIQNKCLLSKWL 181
>ref|XP_008675553.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
Length = 310
Score = 72.4 bits (176), Expect = 1e-10
Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G +S G RL INSVL+S++++M+SF+ + V ++ID ++ GE K L
Sbjct: 156 WKGKLMSVGGRLVLINSVLTSLAMFMMSFFKVPKGVLEKIDYFRSRFFWQGEGHKKKYRL 215
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFI 278
+W +C+PK++GG +L+LE NK LL KWL +
Sbjct: 216 ARWDVICQPKEVGGLGILNLEVHNKCLLSKWLYKLL 251
>ref|XP_008654536.1| PREDICTED: putative ribonuclease H protein At1g65750 isoform X3
[Zea mays]
Length = 369
Score = 72.4 bits (176), Expect = 1e-10
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLSS+ LYM+SF+ + V K++D ++ ++ K L
Sbjct: 25 WKGKHLSYGGRLVLINSVLSSLPLYMLSFFEIPREVLKKVDYLRSRFFWQSDQQKKKFRL 84
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
KW +C+PKD+GG + +++ NK LL KWL
Sbjct: 85 AKWSILCQPKDIGGLGIKNIDIQNKCLLSKWL 116
>ref|XP_008654535.1| PREDICTED: putative ribonuclease H protein At1g65750 isoform X2
[Zea mays]
Length = 429
Score = 72.4 bits (176), Expect = 1e-10
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLSS+ LYM+SF+ + V K++D ++ ++ K L
Sbjct: 25 WKGKHLSYGGRLVLINSVLSSLPLYMLSFFEIPREVLKKVDYLRSRFFWQSDQQKKKFRL 84
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
KW +C+PKD+GG + +++ NK LL KWL
Sbjct: 85 AKWSILCQPKDIGGLGIKNIDIQNKCLLSKWL 116
>ref|XP_008654531.1| PREDICTED: putative ribonuclease H protein At1g65750 isoform X1
[Zea mays]
Length = 433
Score = 72.4 bits (176), Expect = 1e-10
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLSS+ LYM+SF+ + V K++D ++ ++ K L
Sbjct: 25 WKGKHLSYGGRLVLINSVLSSLPLYMLSFFEIPREVLKKVDYLRSRFFWQSDQQKKKFRL 84
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWL 266
KW +C+PKD+GG + +++ NK LL KWL
Sbjct: 85 AKWSILCQPKDIGGLGIKNIDIQNKCLLSKWL 116
>ref|XP_010645576.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC100855389 [Vitis vinifera]
Length = 1856
Score = 72.0 bits (175), Expect = 2e-10
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDK---KYSLGGEESKGFSCL 170
W+ +SKG R+T I SVL+SM +Y +S + + V +R+DK + GG + + L
Sbjct: 456 WKRQYISKGGRITLIRSVLASMPIYHMSLFRMPKSVARRLDKVQRDFLWGGGSEEKKAHL 515
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFIISLI*CDVSWLEVSIIR 329
+KW+ +C K GG + L +NKALLGKW+ F I DV W +V I +
Sbjct: 516 IKWEAICGDKSKGGLGLRKLVLLNKALLGKWVWRFAIDR---DVLWKQVKIAK 565
>emb|CAN71170.1| hypothetical protein VITISV_022666 [Vitis vinifera]
Length = 657
Score = 71.2 bits (173), Expect = 3e-10
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDK---KYSLGGEESKGFSCL 170
W+ +SKG R+T I SVL+SMS+Y +S + + V +R+DK + GG + + L
Sbjct: 133 WKRQYISKGGRITLIRSVLASMSIYHMSLFRMPKSVARRLDKVQRDFLWGGGSEEKKTHL 192
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFIISLI*CDVSWLEVSI 323
+KW+ +C+ K GG + L +NKALLGKW+ F I D W +V I
Sbjct: 193 IKWEAICEDKSKGGLGLRKLVLLNKALLGKWVWRFAIDR---DDLWKQVII 240
>gb|AAP53939.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1652
Score = 70.9 bits (172), Expect = 4e-10
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLS+++++M+SF+ + + K++D ++ +E K L
Sbjct: 1494 WKGKFLSVGGRLVLINSVLSNLAIFMLSFFEIPKGILKKLDYYRSRFFWQCDEHKKKYRL 1553
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFI 278
+W +CKPK+ GG + +LE NK LL KWL I
Sbjct: 1554 ARWSVLCKPKECGGLGIQNLEIQNKCLLSKWLYKLI 1589
>dbj|BAS85450.1| Os03g0643433 [Oryza sativa Japonica Group]
Length = 643
Score = 70.5 bits (171), Expect = 5e-10
Identities = 38/96 (39%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRID---KKYSLGGEESKGFSCL 170
W+G LS G RL INSVLSS++++M+SF+ + + K++D ++ +E+K L
Sbjct: 308 WKGKHLSVGGRLVLINSVLSSLAMFMLSFFEIPKGILKKLDYYRSRFFWQCDENKKKYRL 367
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFI 278
KW +C PK+ GG + +LE N+ LL KWL I
Sbjct: 368 AKWSVLCSPKECGGLGIQNLETQNRCLLSKWLFQLI 403
>ref|XP_010656238.1| PREDICTED: uncharacterized protein LOC104880636 [Vitis vinifera]
Length = 1106
Score = 70.5 bits (171), Expect = 5e-10
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Frame = +3
Query: 3 WQGPCLSKG-RLTFINSVLSSMSLYMISFYLLSVWVRKRIDK---KYSLGGEESKGFSCL 170
W+ +SKG R+T I SVL+SM +Y +S + + V KR+DK + GG + + L
Sbjct: 678 WKRQYISKGGRITLIRSVLASMPIYHMSLFRMPKSVAKRLDKVQRDFLWGGGSEEKKAHL 737
Query: 171 VKWKEVCKPKDLGGSCVLDLEEMNKALLGKWLQNFIISLI*CDVSWLEVSIIR 329
+KW+ +C+ K GG + L +NKALLGKW+ F I D W +V + +
Sbjct: 738 IKWEAICEDKSKGGLGLRKLVFLNKALLGKWVWRFAIDR---DDLWKQVIVAK 787