BLASTX nr result
ID: Ophiopogon21_contig00029905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ophiopogon21_contig00029905 (512 letters) Database: ./nr 77,306,371 sequences; 28,104,191,420 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010108178.1| Transcription factor IIIB 90 kDa subunit [Mo... 58 3e-06 >ref|XP_010108178.1| Transcription factor IIIB 90 kDa subunit [Morus notabilis] gi|587931004|gb|EXC18103.1| Transcription factor IIIB 90 kDa subunit [Morus notabilis] Length = 517 Score = 57.8 bits (138), Expect = 3e-06 Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 10/114 (8%) Frame = -3 Query: 507 QYKTMIWELMNKEYLEEKSRXXXXXXXXATGNKPRKERKQRRVGDXXXXXXXNTGGSEEM 328 +YK +IWE MN+EYLEE++ + KPRKER+Q++ D + Sbjct: 360 RYKKIIWEEMNREYLEEQA-AKMEAGEGLSAPKPRKERRQKQ--DPNAPPAQTAAEAARQ 416 Query: 327 LLPDKRVSSRINYDMLTRL-------NGEEKAKQQQDIETDTGGV---GNEEKN 196 +L KR SS+INY+ L + N + K Q D E D G GNE+K+ Sbjct: 417 MLSKKRFSSKINYEALEKCFSGDVGPNKKAKVSGQDDDEDDGSGKGPGGNEKKS 470