BLASTX nr result

ID: Ophiopogon21_contig00029365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00029365
         (581 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010933268.1| PREDICTED: psbQ-like protein 3, chloroplasti...    72   2e-10
ref|XP_008797931.1| PREDICTED: psbQ-like protein 3, chloroplasti...    65   2e-08
ref|XP_010277337.1| PREDICTED: psbQ-like protein 3, chloroplasti...    58   4e-06
ref|XP_009390695.1| PREDICTED: psbQ-like protein 3, chloroplasti...    57   7e-06
ref|XP_003600596.2| oxygen-evolving enhancer protein [Medicago t...    57   9e-06

>ref|XP_010933268.1| PREDICTED: psbQ-like protein 3, chloroplastic [Elaeis guineensis]
          Length = 183

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
 Frame = +3

Query: 279 MAASMAAAVQLCSSNPTHPNQXXXXXXXXXXXXNLHELL--FNRRMAIASSSLSTTFIAG 452
           MA+ MA  +QLCS+ P+ P+                +L    NRR   A+++L+T F+  
Sbjct: 1   MASPMA--LQLCSTIPS-PSLSSPQRRCSRPGHTTQDLQRQLNRRRLTAAAALTTAFLVK 57

Query: 453 EAFWNRNAATAFDLGFTVPDQTVEEAEGAIKGHAQDLLQIK 575
           EAF N N A++F+  FTVPDQT+EEA+  +K HA+DLLQIK
Sbjct: 58  EAFSNSNNASSFEFRFTVPDQTLEEADAGVKVHARDLLQIK 98


>ref|XP_008797931.1| PREDICTED: psbQ-like protein 3, chloroplastic [Phoenix dactylifera]
          Length = 179

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = +3

Query: 387 ELLFNRRMAIASSSLSTTFIAGEAFWNRNAATAFDLGFTVPDQTVEEAEGAIKGHAQDLL 566
           E    RR   A+++L+T F+  EAF N N A++ +  FTVPDQT+EEA+  +K HA+DLL
Sbjct: 32  ERQLTRRRLTAAAALATAFLVKEAFSNLNNASSLEFRFTVPDQTLEEADAGVKVHARDLL 91

Query: 567 QIK 575
           QIK
Sbjct: 92  QIK 94


>ref|XP_010277337.1| PREDICTED: psbQ-like protein 3, chloroplastic [Nelumbo nucifera]
          Length = 186

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 29/60 (48%), Positives = 37/60 (61%)
 Frame = +3

Query: 402 RRMAIASSSLSTTFIAGEAFWNRNAATAFDLGFTVPDQTVEEAEGAIKGHAQDLLQIKAL 581
           RR A A+   +   +A EA +  N A +FD   T PDQT+EEAE  I+ HAQDLL +K L
Sbjct: 44  RRKATAAGLATVVLLAREAIFCPNVAYSFDFRITAPDQTLEEAESTIRAHAQDLLDVKDL 103


>ref|XP_009390695.1| PREDICTED: psbQ-like protein 3, chloroplastic [Musa acuminata
           subsp. malaccensis]
          Length = 185

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 28/65 (43%), Positives = 43/65 (66%)
 Frame = +3

Query: 387 ELLFNRRMAIASSSLSTTFIAGEAFWNRNAATAFDLGFTVPDQTVEEAEGAIKGHAQDLL 566
           +LL  RR A A+++++    A EA    + A+A +  FT P+QT EEA+  +K HA+DL+
Sbjct: 38  QLLIGRRQATAAAAVAVALHAKEAISGSSVASALEFRFTAPEQTPEEADAVVKIHARDLV 97

Query: 567 QIKAL 581
           +IKAL
Sbjct: 98  RIKAL 102


>ref|XP_003600596.2| oxygen-evolving enhancer protein [Medicago truncatula]
           gi|657393799|gb|AES70847.2| oxygen-evolving enhancer
           protein [Medicago truncatula]
          Length = 177

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 30/68 (44%), Positives = 43/68 (63%)
 Frame = +3

Query: 378 NLHELLFNRRMAIASSSLSTTFIAGEAFWNRNAATAFDLGFTVPDQTVEEAEGAIKGHAQ 557
           +LH+  F+  + I+  +L   F +GE  +    A AFD G  VPDQTVEEA+  ++ HAQ
Sbjct: 30  HLHQKNFS--LKISRRNLGLIF-SGECIFRTKGANAFDFGLVVPDQTVEEAQNVVRVHAQ 86

Query: 558 DLLQIKAL 581
           DLLQ++ L
Sbjct: 87  DLLQVRDL 94


Top