BLASTX nr result

ID: Ophiopogon21_contig00029355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00029355
         (367 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]...    52   3e-07

>gb|AAA84682.1| unknown protein (chloroplast) [Nicotiana tabacum]
           gi|224352|prf||1102209F ORF 6
          Length = 79

 Score = 51.6 bits (122), Expect(2) = 3e-07
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -1

Query: 346 MKVDYLTINLTTSMISSRTKHESFDSFGSHAQ 251
           MKVDY +I    S+I SRTKHESFDSFGSHAQ
Sbjct: 1   MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQ 32



 Score = 29.6 bits (65), Expect(2) = 3e-07
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -3

Query: 200 SSLFLFVFKHIKTDTRTEY*EDSSDQTKNL 111
           SSLF+F  K I+T+   +Y EDSSD+ KN+
Sbjct: 51  SSLFIFQ-KDIETNVIPKYSEDSSDKIKNM 79


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