BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00029173
         (370 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    45   1e-08
emb|CDP17738.1| unnamed protein product [Coffea canephora]             45   2e-08
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...    42   5e-08
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...    40   6e-07
gb|ABD63150.1| Putative retroelement pol polyprotein, related [A...    47   1e-06

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 44.7 bits (104), Expect(3) = 1e-08
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 5/51 (9%)
 Frame = +1

Query: 232 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSS---DEDITKP-HMR 369
           LK T G+LVM +G+ + NLYY +G+TV G +AAA SS   D + TK  HMR
Sbjct: 314 LKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKDAEATKLWHMR 364



 Score = 38.1 bits (87), Expect(3) = 1e-08
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +3

Query: 39  F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCVGLEKESFL 191
           F +LDGGVVYM ND+ C    I ++K   HD   R L +VR V   K++ +
Sbjct: 245 FQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLI 295



 Score = 22.3 bits (46), Expect(3) = 1e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 176 ERVISLGTLESKGFKV 223
           + +ISLG LESKG  V
Sbjct: 292 KNLISLGALESKGLVV 307


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score = 44.7 bits (104), Expect(3) = 2e-08
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 6/52 (11%)
 Frame = +1

Query: 232 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSS----DEDITKP-HMR 369
           LKVT G+L+M +G+R+ NLYY +G+TV G  A A SS    D + TK  HMR
Sbjct: 398 LKVTSGALLMLKGVRKNNLYYYQGSTVVGTAAVATSSSSKKDAEATKLWHMR 449



 Score = 36.6 bits (83), Expect(3) = 2e-08
 Identities = 22/51 (43%), Positives = 28/51 (54%)
 Frame = +3

Query: 39  F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCVGLEKESFL 191
           F +LDGG VYM ND+ C    I ++K   HD   R L +VR V   K S +
Sbjct: 329 FEELDGGFVYMGNDNPCKTVGIGSIKLRNHDGSTRILKDVRYVPNLKRSLI 379



 Score = 22.7 bits (47), Expect(3) = 2e-08
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2

Query: 182 VISLGTLESKGFKV 223
           +ISLG LESKG +V
Sbjct: 378 LISLGLLESKGLEV 391


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score = 42.4 bits (98), Expect(3) = 5e-08
 Identities = 21/39 (53%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
 Frame = +1

Query: 232 LKVTKGSLVM-RGIRERNLYYLKGNTVTGALAAAMSSDE 345
           LK T G+LVM +G+ + NLYY +G+TV G +AAA SS +
Sbjct: 313 LKATLGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSK 351



 Score = 38.1 bits (87), Expect(3) = 5e-08
 Identities = 22/51 (43%), Positives = 30/51 (58%)
 Frame = +3

Query: 39  F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCVGLEKESFL 191
           F +LDGGVVYM ND+ C    I ++K   HD   R L +VR V   K++ +
Sbjct: 244 FQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKKNLI 294



 Score = 22.3 bits (46), Expect(3) = 5e-08
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 176 ERVISLGTLESKGFKV 223
           + +ISLG LESKG  V
Sbjct: 291 KNLISLGALESKGLVV 306


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score = 40.4 bits (93), Expect(3) = 6e-07
 Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 232 LKVTKGSL-VMRGIRERNLYYLKGNTVTGALAAAMSSDED 348
           LKV  G L VM+G R  NLYYL G+T+ G+ + A + D D
Sbjct: 97  LKVVAGILTVMKGTRRNNLYYLNGSTIIGSTSTASTKDAD 136



 Score = 36.6 bits (83), Expect(3) = 6e-07
 Identities = 16/49 (32%), Positives = 31/49 (63%)
 Frame = +3

Query: 45  KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCVGLEKESFL 191
           +L+GG+V+M ND AC    + T++   HD +++ L +VR +   K++ +
Sbjct: 30  ELEGGIVFMGNDSACKTMGVGTIQLKNHDGLIQVLTDVRYIPSLKKNLI 78



 Score = 22.3 bits (46), Expect(3) = 6e-07
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 176 ERVISLGTLESKGFKV 223
           + +ISLG LESKG  +
Sbjct: 75  KNLISLGVLESKGLTI 90


>gb|ABD63150.1| Putative retroelement pol polyprotein, related [Asparagus
           officinalis]
          Length = 168

 Score = 47.4 bits (111), Expect(4) = 1e-06
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +3

Query: 39  F*KLDGGVVYMENDHACFMKRIDTMKNGMHDEVVRKLIEVRCVGLEKESFL 191
           F +LDGGV+ MEND +C +  I T++  MHD VVR+L +VR V   K++ +
Sbjct: 29  FERLDGGVIIMENDQSCGICTIGTVRIRMHDGVVRELKDVRFVPQLKKNLI 79



 Score = 25.0 bits (53), Expect(4) = 1e-06
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +2

Query: 176 ERVISLGTLESKGFKV 223
           + +IS+G LE+KGFKV
Sbjct: 76  KNLISVGALEAKGFKV 91



 Score = 22.7 bits (47), Expect(4) = 1e-06
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +1

Query: 223 NANLKVTKGSL-VMRGIRERNLYYLKG 300
           +A  KVTKGSL VM+G+    L   +G
Sbjct: 95  DAEAKVTKGSLVVMKGVCSLELILSEG 121



 Score = 21.9 bits (45), Expect(4) = 1e-06
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 1  ATYHVCPRK*FYS 39
          ATYHV PR+ ++S
Sbjct: 15 ATYHVTPRRDWFS 27