BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00029075
         (780 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...   191   6e-46
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v...   189   2e-45
emb|CDP17738.1| unnamed protein product [Coffea canephora]            182   2e-43
gb|AFB73911.1| polyprotein [Citrus sinensis]                          163   1e-37
gb|AFB73912.1| polyprotein [Citrus sinensis]                          159   3e-36
gb|ABD63150.1| Putative retroelement pol polyprotein, related [A...   157   6e-36
ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766...   157   8e-36
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   155   2e-35
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...   151   6e-34
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              150   7e-34
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     148   4e-33
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              148   5e-33
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              148   5e-33
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              148   5e-33
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  147   1e-32
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     146   2e-32
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   146   2e-32
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        145   2e-32
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]   143   1e-31
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                143   1e-31

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score =  191 bits (484), Expect = 6e-46
 Identities = 102/255 (40%), Positives = 149/255 (58%), Gaps = 1/255 (0%)
 Frame = -1

Query: 771 EYDTFITSLLSNRTTLRYDEATATIINFENRKKHR-DASTSSSGEALAARGRSMNQXXXX 595
           E++   T+LL  +  +  D   + + + E RK+ +    +++S EAL ARGR  +Q    
Sbjct: 96  EFEHLETTLLHGKENVSLDVVCSALYSHELRKQDKMKTKSTTSEEALVARGRQQSQTKER 155

Query: 594 XXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDSDDS 415
                       +AKD+C  C + GHW  DCP+ + K  V      +AN     +D +  
Sbjct: 156 RGMSKSKGRA--VAKDECAFCHEKGHWKKDCPKLQKKEKV----LQDANVAECKSDVESD 209

Query: 414 VFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQGIG 235
           +  +        +D  EW+LDSG TYH+CP ++WF  F++LDGGVVYMGND+ C   GIG
Sbjct: 210 ISLIVSLSASLYLD--EWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIG 267

Query: 234 TVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMRGV 55
           ++K++ HDG  R L +VRYVP LKKNLISLG+LE+K   VT+ + ILK    +LV+++GV
Sbjct: 268 SIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATSGALVMLKGV 327

Query: 54  RDKNLYYLKGTTRTG 10
              NLYY +G+T  G
Sbjct: 328 MKNNLYYYQGSTVVG 342


>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 813

 Score =  189 bits (479), Expect = 2e-45
 Identities = 107/257 (41%), Positives = 150/257 (58%), Gaps = 3/257 (1%)
 Frame = -1

Query: 771 EYDTFITSLLSNRTTLRYDEATATIINFENRK--KHRDASTSSSGEALAARGRSMNQXXX 598
           E++   T+LL  +  +  D   + + + E RK  K R  ST+S  EAL  RGR  +Q   
Sbjct: 95  EFEHLETTLLHGKENVSLDAVCSALYSHELRKQDKMRTKSTTSE-EALVIRGRQQSQTKE 153

Query: 597 XXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDSDD 418
                        +AKD+C  C + GHW  DCP+ + K  V      +AN     +D + 
Sbjct: 154 RRGMSKSKGRV--VAKDECAFCHEKGHWKKDCPKLQKKEKVP----QDANVAECKSDVES 207

Query: 417 SVFSLSLTPTVCAVD-SSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQG 241
            +   SL  ++ A     EW+LDSG TYH+CP ++WF  F++LDGGVVYMGND+ C   G
Sbjct: 208 DI---SLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVG 264

Query: 240 IGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMR 61
           IG++K++ HDG  R L +VRYVP LKKNLISLG+LE+K   VT+ + ILK    +LV+++
Sbjct: 265 IGSIKLRNHDGSTRILRDVRYVPKLKKNLISLGALESKGLVVTMRDGILKATLGALVMLK 324

Query: 60  GVRDKNLYYLKGTTRTG 10
           GV   NLYY +G+T  G
Sbjct: 325 GVMKNNLYYYQGSTVVG 341


>emb|CDP17738.1| unnamed protein product [Coffea canephora]
          Length = 798

 Score =  182 bits (462), Expect = 2e-43
 Identities = 101/255 (39%), Positives = 150/255 (58%), Gaps = 1/255 (0%)
 Frame = -1

Query: 771 EYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDAS-TSSSGEALAARGRSMNQXXXX 595
           E++   T+LL  +  +  D   + + + E RK+ +     +++ EAL ARGR  +Q    
Sbjct: 182 EFEHLETTLLHGKENVSLDAVCSALYSRELRKQDKKKKKVAAADEALVARGRQQSQSKGR 241

Query: 594 XXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDSDDS 415
                       +AKD+C  C + GHW  DCP+ + K      A  + N     +D++ S
Sbjct: 242 RGWSKSISR---VAKDECAFCREKGHWKKDCPKLKKKGK----APQDVNVAECKSDAE-S 293

Query: 414 VFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQGIG 235
            FSL+++      D  EW+LDS  TYH+ P +EWF  FE+LDGG VYMGND+ C   GIG
Sbjct: 294 DFSLAVSRLTSHPD--EWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGIG 351

Query: 234 TVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMRGV 55
           ++K++ HDG  R L +VRYVP LK++LISLG LE+K  +V + + ILKV   +L++++GV
Sbjct: 352 SIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRMRDGILKVTSGALLMLKGV 411

Query: 54  RDKNLYYLKGTTRTG 10
           R  NLYY +G+T  G
Sbjct: 412 RKNNLYYYQGSTVVG 426


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  163 bits (413), Expect = 1e-37
 Identities = 98/259 (37%), Positives = 147/259 (56%), Gaps = 9/259 (3%)
 Frame = -1

Query: 768 YDTFITSLLSNRT--TLRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I +L +N    +L +D+  A+++N E+R+K+++   +SS +A A    RGRS  + 
Sbjct: 151 YDQLIINLTNNNPVESLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C K GH   +C   + +R  K   TS A      + S
Sbjct: 211 PSGSQNQGRSKFRGK-KNVKCYNCGKKGHVKKECWSNQKRREGKEPETSNAQGCV-ASTS 268

Query: 423 DDSVFSLSLTPTVCAVD---SSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHAC 253
           DD     S   TV       S  W++DSGAT+H+  R+EWF ++E + GG VYMGNDHA 
Sbjct: 269 DDGEILYSEATTVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHAL 328

Query: 252 SMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESL 73
            + GIGT+KI+M DG IR + EVR+V  LKKNL+SLG +++  +K  +EN I+K++K +L
Sbjct: 329 EIAGIGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKGAL 388

Query: 72  VVMRGVR-DKNLYYLKGTT 19
           V+M+  +   NL+ LKG T
Sbjct: 389 VLMKVEKIGANLFMLKGET 407


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  159 bits (401), Expect = 3e-36
 Identities = 94/260 (36%), Positives = 145/260 (55%), Gaps = 10/260 (3%)
 Frame = -1

Query: 768 YDTFITSLLSNRT--TLRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I +L +N    +L +D+  A+++N E+R+K+++   +SS +A A    RGRS  + 
Sbjct: 151 YDQLIINLTNNNPVDSLVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C K GH   +C   + +R  K   +S A         
Sbjct: 211 PSGSQNHGRSKSRSK-KNVKCYNCGKKGHVKKECWSNQKRREGKEPESSNAQGCVASTSD 269

Query: 423 DDSVFSLSLTPTVCAVD----SSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHA 256
           D  +  L    T+ +      S  W++DSGAT+H+  R+EWF ++E + GG VYMGNDHA
Sbjct: 270 DGEI--LYSEATIVSEGRKRLSDVWLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHA 327

Query: 255 CSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKES 76
             + GIGT+KI+M DG IR + EVR+V  LKKNL+SLG +++   K  +EN I+K++K +
Sbjct: 328 LEIAGIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKGA 387

Query: 75  LVVMRGVR-DKNLYYLKGTT 19
           LV+M+  +   NL+ LKG T
Sbjct: 388 LVLMKAEKICANLFMLKGET 407


>gb|ABD63150.1| Putative retroelement pol polyprotein, related [Asparagus
           officinalis]
          Length = 168

 Score =  157 bits (398), Expect = 6e-36
 Identities = 77/121 (63%), Positives = 96/121 (79%)
 Frame = -1

Query: 378 VDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQGIGTVKIQMHDGVIR 199
           +D+S WMLDSGATYHV PR++WFSSFE+LDGGV+ M ND +C +  IGTV+I+MHDGV+R
Sbjct: 4   LDASYWMLDSGATYHVTPRRDWFSSFERLDGGVIIMENDQSCGICTIGTVRIRMHDGVVR 63

Query: 198 ELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMRGVRDKNLYYLKGTT 19
           EL +VR+VP LKKNLIS+G+LEAK FKVT E++  KV K SLVVM+GV    L   +G  
Sbjct: 64  ELKDVRFVPQLKKNLISVGALEAKGFKVTFEDAEAKVTKGSLVVMKGVCSLELILSEGEH 123

Query: 18  R 16
           R
Sbjct: 124 R 124


>ref|XP_012441923.1| PREDICTED: uncharacterized protein LOC105766925 [Gossypium
           raimondii]
          Length = 217

 Score =  157 bits (397), Expect = 8e-36
 Identities = 68/125 (54%), Positives = 96/125 (76%)
 Frame = -1

Query: 381 AVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQGIGTVKIQMHDGVI 202
           A  + EW+LD G TYH+CP K+WFSS ++L+GG+V+MGND AC   G+GT++++ HDG+I
Sbjct: 2   ACHTDEWILDLGCTYHMCPNKDWFSSLKELEGGIVFMGNDSACKTMGVGTIQLKNHDGLI 61

Query: 201 RELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMRGVRDKNLYYLKGT 22
           + LT+VRY+P+LKKNLISLG LE+K   +T+ + +LKV+   L VM+G R  NLYYL G+
Sbjct: 62  QVLTDVRYIPSLKKNLISLGVLESKGLTITLRDGLLKVVAGILTVMKGTRRNNLYYLNGS 121

Query: 21  TRTGA 7
           T  G+
Sbjct: 122 TIIGS 126


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  155 bits (393), Expect = 2e-35
 Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 1/261 (0%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSSGEALAARGRSMNQXX 601
           L + ++ F+ S +  + T+  +E  + + + E R K    ST      L    R   +  
Sbjct: 149 LPMSFENFVQSFIVGKDTVSLEEVRSALHSRELRHKANGTSTDIQPSGLFTSSRKGRKNG 208

Query: 600 XXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDSD 421
                            D C  C + GHW  DCP+++ +   +  + + A   T  N  +
Sbjct: 209 GKKNKPMSKGAKPD---DVCNYCKEKGHWKFDCPKKKKQSEKQSVSAAVAEEDT--NSEE 263

Query: 420 DSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQG 241
           D    ++L        S  W+LDSGA+YH+CPR+EWF+++E++DGG + M N   C + G
Sbjct: 264 D----IALVADEHTHHSDVWVLDSGASYHICPRREWFTTYEQVDGGSISMANSSVCKVVG 319

Query: 240 IGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMR 61
            G++KI+ HDG    L EVR+VP + KNLISL  L++K F  + ++ +L+V K S ++++
Sbjct: 320 TGSIKIRTHDGSFCTLNEVRHVPLMTKNLISLSLLDSKGFSWSGKDGVLRVWKGSNLILK 379

Query: 60  GVRDKNLYYLKGTTRTG-AHV 1
           GV    LY+L+G+T TG AHV
Sbjct: 380 GVMRGTLYFLQGSTVTGSAHV 400


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score =  151 bits (381), Expect = 6e-34
 Identities = 91/268 (33%), Positives = 143/268 (53%), Gaps = 11/268 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSSG-EALAARGRSMNQX 604
           L   Y  F  ++L +R TL   E    +   E  KK   +  S+S  E+L  RGR   + 
Sbjct: 93  LPSSYANFRDTILYSRDTLTLQEVYDALHAKEKMKKMVPSEGSNSQPESLVVRGRQQEKN 152

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGHWDADCPERRNKR----NVKLAATSEA 451
                           +K +     C+ C + GH  +DC + +NK     N K     E 
Sbjct: 153 TDNKSRDKSSSGYRGRSKSRGRYKSCKYCKRGGHDISDCWKLQNKEKHKGNYKPKGKQEE 212

Query: 450 NTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYM 271
                    +     L +    C   S EW+LD+G TYH+CP ++WF+++E + GG V M
Sbjct: 213 QGKAAVATDNKPDAELLVAYAGCVQTSDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLM 272

Query: 270 GNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILK 91
           G++  C + G+GT++I+M DG IR L++VR++P+LK+NLISL +L+ K ++ +  + ILK
Sbjct: 273 GDNTPCKVAGVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILK 332

Query: 90  VIKESLVVMRG-VRDKNLYYLKGTTRTG 10
           V K SLVVM+  +++ +LY+L+GTT  G
Sbjct: 333 VTKGSLVVMKADIKNADLYHLQGTTIVG 360


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  150 bits (380), Expect = 7e-34
 Identities = 87/257 (33%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = -1

Query: 768 YDTFITSLLSNRT--TLRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I ++ +N    TL +D+    I+  E+R+K+++  + SS +A A    RGRS  + 
Sbjct: 151 YDQLIINITNNNIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C   GH   +C   +        AT+    V   +D 
Sbjct: 211 PSGSQNHGRSKSRRK-NNIKCYGCGMKGHVKKECWNNKKNGEKNSEATTSQGCVASTSDD 269

Query: 423 DDSVFSLSLTPTVCAVDSSE-WMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSM 247
            + ++S + T +      ++ W++DSGAT+H+ P ++WF S+E +  G VYMGNDHA  +
Sbjct: 270 GEILYSEAATSSEGERQLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEI 329

Query: 246 QGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVV 67
            G+GT++++MHDG +R++  VR+V  LKKNL+S+G L+    K+  E+ ILKV+K +LVV
Sbjct: 330 AGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKGNLVV 389

Query: 66  MRGVR-DKNLYYLKGTT 19
           M+  +   NLY L G T
Sbjct: 390 MKAEKITSNLYMLLGDT 406


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  148 bits (374), Expect = 4e-33
 Identities = 92/269 (34%), Positives = 139/269 (51%), Gaps = 12/269 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSS-GEALAARGRSMNQX 604
           L   Y  F  ++L +R TL   E    +   E  KK   +  S+S  E L  RGR   + 
Sbjct: 60  LPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKN 119

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGH-----WDADCPERRNKRNVKLAATSE 454
                           +K +     C+ C + GH     W     ++R ++ +      E
Sbjct: 120 TNNKSRDKSSSIYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTRKYIPKGKKEE 179

Query: 453 ANTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVY 274
                   D + S   L +    CA  S +W+LD+  TYH+CP ++WF+++E + GG V 
Sbjct: 180 EGKAAVVTD-EKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEAVQGGTVL 238

Query: 273 MGNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSIL 94
           MG+D  C + GIGTV+I+M DG IR L +VR++P LK++LISL +L+ K +K +  + IL
Sbjct: 239 MGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 298

Query: 93  KVIKESLVVMRG-VRDKNLYYLKGTTRTG 10
           KV K SLVVM+  ++  NLY+L+GTT  G
Sbjct: 299 KVTKGSLVVMKADIKYANLYHLRGTTILG 327


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  148 bits (373), Expect = 5e-33
 Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = -1

Query: 768 YDTFITSLLSNRT--TLRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I ++ +N    TL +D+    I+  E+R+K+++  + SS +A A    RGRS  + 
Sbjct: 151 YDQLIINITNNNIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C   GH   +C   +        A++    V   +D 
Sbjct: 211 PSGSQNHGRSKSRRK-KNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDD 269

Query: 423 DDSVFSLSLTPTVCAVDSSE-WMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSM 247
            + ++S + T +      ++ W++DSGAT+H+ P ++WF S+E +  G VYMGNDHA  +
Sbjct: 270 GEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEI 329

Query: 246 QGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVV 67
            G+GT++++MHDG +R++  VR+V  LKKNL+S+G L+    K+  E+ ILKV+K +LVV
Sbjct: 330 AGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVV 389

Query: 66  MRGVR-DKNLYYLKGTT 19
           M+  +   NLY L G T
Sbjct: 390 MKAEKITSNLYMLLGDT 406


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  148 bits (373), Expect = 5e-33
 Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = -1

Query: 768 YDTFITSLLSNRTT--LRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I ++ +N  T  L +D+    I+  E+R+K+++  + SS +A A    RGRS  + 
Sbjct: 151 YDQLIINITNNNITDTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C   GH   +C   +        A++    V   +D 
Sbjct: 211 PSGSQNHGRSKSRRK-KNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDD 269

Query: 423 DDSVFSLSLTPTVCAVDSSE-WMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSM 247
            + ++S + T +      ++ W++DSGAT+H+ P ++WF S+E +  G VYMGNDHA  +
Sbjct: 270 GEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEI 329

Query: 246 QGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVV 67
            G+GT++++MHDG +R++  VR+V  LKKNL+S+G L+    K+  E+ ILKV+K +LVV
Sbjct: 330 AGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVV 389

Query: 66  MRGVR-DKNLYYLKGTT 19
           M+  +   NLY L G T
Sbjct: 390 MKAEKITSNLYMLLGDT 406


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  148 bits (373), Expect = 5e-33
 Identities = 86/257 (33%), Positives = 141/257 (54%), Gaps = 7/257 (2%)
 Frame = -1

Query: 768 YDTFITSLLSNRT--TLRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  I ++ +N    TL +D+    I+  E+R+K+++  + SS +A A    RGRS  + 
Sbjct: 151 YDQLIINITNNNIADTLHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C   GH   +C   +        A++    V   +D 
Sbjct: 211 PSGSQNHGRSKSRRK-KNIKCYGCGMKGHVKKECWNIKKNGEKNSEASTSQGCVASTSDD 269

Query: 423 DDSVFSLSLTPTVCAVDSSE-WMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSM 247
            + ++S + T +      ++ W++DSGAT+H+ P ++WF S+E +  G VYMGNDHA  +
Sbjct: 270 GEILYSEAATSSKGERRLNDVWIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEI 329

Query: 246 QGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVV 67
            G+GT++++MHDG +R++  VR+V  LKKNL+S+G L+    K+  E+ ILKV+K +LVV
Sbjct: 330 AGVGTIRLKMHDGTVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKGNLVV 389

Query: 66  MRGVR-DKNLYYLKGTT 19
           M+  +   NLY L G T
Sbjct: 390 MKAEKITSNLYMLLGDT 406


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  147 bits (370), Expect = 1e-32
 Identities = 89/257 (34%), Positives = 138/257 (53%), Gaps = 7/257 (2%)
 Frame = -1

Query: 768 YDTFITSLLSNRTT--LRYDEATATIINFENRKKHRDASTSSSGEALA---ARGRSMNQX 604
           YD  + ++ +N     L +++    I+  E+R+K+++    SS +  A    RGRS  + 
Sbjct: 151 YDQLVINITNNNIVDRLSFNDVAGAILEEESRRKNKEDRQDSSKQMEALTVTRGRSTERG 210

Query: 603 XXXXXXXXXXXXXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDS 424
                         +    +C  C K GH   DC   +        A++    V   +D 
Sbjct: 211 PSGSQNHGRSTSRRK-TNLKCYNCGKRGHLKKDCWSNKKSGEKSSEASTSQGCVASTSDD 269

Query: 423 DDSVFSLSLTPTVCAVDSSE-WMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSM 247
            + ++S +   T      ++ W++DSGAT+H+ PR++WF ++E +  G V+MGNDHA  +
Sbjct: 270 GEVLYSEAAVSTKGKNRLTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEI 329

Query: 246 QGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVV 67
            GIGTVKI+M+DG IR L EVR+V  L KNL+S+G L+   +K  I+  ILKV+K SLVV
Sbjct: 330 VGIGTVKIKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVV 389

Query: 66  MRGVR-DKNLYYLKGTT 19
           M+  +   NLY L G T
Sbjct: 390 MKAKKVAANLYMLLGDT 406


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  146 bits (368), Expect = 2e-32
 Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 13/270 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSS-GEALAARGRSMNQX 604
           L   Y  F  ++L +  TL   E    +   E  KK   +  S+S  E L  RGR   + 
Sbjct: 186 LPSSYANFRDTILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKN 245

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGHWDADC------PERRNKRNVKLAATS 457
                           +K +     C+ C + GH  ++C       +R  K   K     
Sbjct: 246 TKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEE 305

Query: 456 EANTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVV 277
           E       ++  D+   L +    CA  S +W+LD+  TYH+CP ++WF+++E L GG V
Sbjct: 306 EGKAAVVTDEKSDT--ELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTV 363

Query: 276 YMGNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSI 97
            MG+D  C + GIGTV+I+M DG IR L++VR++P LK++LISL +L+ K +K +  + I
Sbjct: 364 LMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGI 423

Query: 96  LKVIKESLVVMRG-VRDKNLYYLKGTTRTG 10
           LKV K SLVVM+  ++  NLY+L+GTT  G
Sbjct: 424 LKVTKGSLVVMKADIKSANLYHLRGTTILG 453


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score =  146 bits (368), Expect = 2e-32
 Identities = 93/270 (34%), Positives = 140/270 (51%), Gaps = 13/270 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSS-GEALAARGRSMNQX 604
           L   Y  F  ++L +  TL   E    +   E  KK   +  S+S  E L  RGR   + 
Sbjct: 186 LPSSYANFRDTILYSHDTLILKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGRQQEKN 245

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGHWDADC------PERRNKRNVKLAATS 457
                           +K +     C+ C + GH  ++C       +R  K   K     
Sbjct: 246 TKNQSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISECWKLQDKDKRTGKYIPKGKKEE 305

Query: 456 EANTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVV 277
           E       ++  D+   L +    CA  S +W+LD+  TYH+CP ++WF+++E L GG V
Sbjct: 306 EGKAAVVTDEKSDT--ELLVAYAGCAQTSDQWILDTAWTYHMCPNRDWFATYEALQGGTV 363

Query: 276 YMGNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSI 97
            MG+D  C + GIGTV+I+M DG IR L++VR++P LK++LISL +L+ K +K +  + I
Sbjct: 364 LMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGI 423

Query: 96  LKVIKESLVVMRG-VRDKNLYYLKGTTRTG 10
           LKV K SLVVM+  ++  NLY+L+GTT  G
Sbjct: 424 LKVTKGSLVVMKADIKSANLYHLRGTTILG 453


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  145 bits (367), Expect = 2e-32
 Identities = 91/269 (33%), Positives = 138/269 (51%), Gaps = 12/269 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSS-GEALAARGRSMNQX 604
           L   Y  F  ++L +R TL   E    +   E  KK   +  S+S  E L  RG    + 
Sbjct: 151 LPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVRGSQQEKN 210

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGH-----WDADCPERRNKRNVKLAATSE 454
                           +K +     C+ C + GH     W     ++R  + +      E
Sbjct: 211 TNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKEE 270

Query: 453 ANTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVY 274
                   D + S   L +    CA  S +W+LD+  TYH+CP ++WF+++E + GG V 
Sbjct: 271 EGKAAVVTD-EKSDAELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTVL 329

Query: 273 MGNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSIL 94
           MG+D  C + GIGTV+I+M DG IR L++VR++P LK++LISL +L+ K +K +  + IL
Sbjct: 330 MGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGIL 389

Query: 93  KVIKESLVVMR-GVRDKNLYYLKGTTRTG 10
           KV K SLVVM+  ++  NLY+L+GTT  G
Sbjct: 390 KVTKGSLVVMKASIKSANLYHLQGTTILG 418


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score =  143 bits (361), Expect = 1e-31
 Identities = 85/252 (33%), Positives = 133/252 (52%), Gaps = 3/252 (1%)
 Frame = -1

Query: 750 SLLSNRTTLRYDEATATIINFENRKKHRDASTSSSGEALAARGRSMNQXXXXXXXXXXXX 571
           SL   + TL+Y +   T  + +N    +     SS +    + RS ++            
Sbjct: 67  SLKHFKETLKYGKDDITFDDVQNALNAKVLDMKSSDKTNGGKSRSKSKSKGKKDYRNV-- 124

Query: 570 XXXRIAKDQCRRCLKHGHWDADCPERRNKRNVKLAATSEANTVTKGNDSDDSVFSLSLTP 391
                   +C  C K G     CP+R+ +   K  A   A  +  G DS + V ++ L P
Sbjct: 125 --------KCYHCNKIGQIRRICPDRQQEE--KTQAQGSAAIIDDGYDSTE-VLTIRLNP 173

Query: 390 TVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVVYMGNDHACSMQGIGTVKIQMHD 211
                +  EW+LDSG TYH+CPR++WFSS+++++GG + +GN+ +C++ GIGT+ I MHD
Sbjct: 174 -----NHEEWVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMAINMHD 228

Query: 210 GVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSILKVIKESLVVMRGVRDKNLYYL 31
           G  R L EVR+VP LK+NLISLG+L+   +    +N  L + K ++VVM+G +   L+ L
Sbjct: 229 GKTRTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTISKXAMVVMKGQKRNGLHIL 288

Query: 30  K---GTTRTGAH 4
           +   G  R   H
Sbjct: 289 EDLWGPARVSTH 300


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score =  143 bits (361), Expect = 1e-31
 Identities = 91/270 (33%), Positives = 139/270 (51%), Gaps = 13/270 (4%)
 Frame = -1

Query: 780 LEVEYDTFITSLLSNRTTLRYDEATATIINFENRKKHRDASTSSS-GEALAARGRSMNQX 604
           L   Y  F  ++L +R TL   E    +   E  KK   +  S+S  E L  +G    + 
Sbjct: 136 LPSSYANFRDTILYSRDTLTLKEVYDALHAKEKMKKMVPSEGSNSQAEGLVVQGSQQEKN 195

Query: 603 XXXXXXXXXXXXXXRIAKDQ-----CRRCLKHGHWDADC------PERRNKRNVKLAATS 457
                           +K +     C+ C + GH  + C       +R  K   K     
Sbjct: 196 TNNKSRDKSSSSYRGRSKSRGRYKSCKYCKRDGHDISKCWKLQDKDKRTGKYIPKGKKED 255

Query: 456 EANTVTKGNDSDDSVFSLSLTPTVCAVDSSEWMLDSGATYHVCPRKEWFSSFEKLDGGVV 277
           E       ++  D+   L +    CA  S +W+LD+  TYH+CP ++WF+++E + GG V
Sbjct: 256 EGKAAVVTDEKSDA--ELLVAYAGCAQTSDQWILDTACTYHMCPNRDWFATYEVVQGGTV 313

Query: 276 YMGNDHACSMQGIGTVKIQMHDGVIRELTEVRYVPALKKNLISLGSLEAKEFKVTIENSI 97
            MG+D  C + GIGTV+I+M DG IR L++VR++P LK++LISL +L+ K +K +  + I
Sbjct: 314 LMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGI 373

Query: 96  LKVIKESLVVMRG-VRDKNLYYLKGTTRTG 10
           LKV K SLVVM+  ++  NLY+L+GTT  G
Sbjct: 374 LKVTKGSLVVMKADIKSANLYHLQGTTILG 403