BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00026544
         (479 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB18346.1| RNA polymerase beta subunit, partial (plastid) [N...   154   3e-58
gb|AFB18344.1| RNA polymerase beta subunit, partial (plastid) [N...   154   4e-58
gb|AFB18334.1| RNA polymerase beta subunit, partial (plastid) [F...   152   2e-57
gb|AFB18349.1| RNA polymerase beta subunit, partial (plastid) [P...   151   2e-57
gb|AFB18353.1| RNA polymerase beta subunit, partial (plastid) [S...   154   3e-57
gb|AFB18350.1| RNA polymerase beta subunit, partial (plastid) [P...   154   5e-57
ref|YP_009116334.1| RNA polymerase beta subunit (chloroplast) [A...   154   9e-56
ref|YP_008854503.1| RNA polymerase beta subunit [Ravenala madaga...   156   2e-55
gb|AKR80858.1| RNA polymerase beta subunit (plastid) [Xerophyta ...   153   3e-55
gb|AFB18325.1| RNA polymerase beta subunit, partial (plastid) [B...   145   4e-55
ref|YP_009130119.1| RNA polymerase beta subunit (chloroplast) [C...   155   4e-55
gb|AFB18333.1| RNA polymerase beta subunit, partial (plastid) [F...   151   7e-55
ref|YP_009141855.1| DNA-directed RNA polymerase beta chain (chlo...   154   7e-55
gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japono...   153   7e-55
gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japono...   153   7e-55
ref|YP_009145096.1| RNA polymerase beta subunit (chloroplast) [P...   151   7e-55
ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia colli...   155   1e-54
ref|YP_003433967.1| RNA polymerase beta subunit [Typha latifolia...   156   1e-54
ref|YP_009092759.1| RNA polymerase beta subunit [Bomarea edulis]...   155   1e-54
gb|AGQ55667.1| RNA polymerase beta subunit (chloroplast) [Alstro...   155   1e-54

>gb|AFB18346.1| RNA polymerase beta subunit, partial (plastid) [Neoregelia
           carolinae]
          Length = 1085

 Score =  154 bits (390), Expect(2) = 3e-58
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 48  FHKFPKIEDTDQEIEFKLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 107

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 108 QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 141



 Score = 97.8 bits (242), Expect(2) = 3e-58
 Identities = 46/49 (93%), Positives = 46/49 (93%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 8   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 56


>gb|AFB18344.1| RNA polymerase beta subunit, partial (plastid) [Navia saxicola]
          Length = 1087

 Score =  154 bits (388), Expect(2) = 4e-58
 Identities = 78/94 (82%), Positives = 83/94 (88%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKT RDM
Sbjct: 48  FHKFPKIEDTDQEIEFQLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTSRDM 107

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 108 QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 141



 Score = 97.8 bits (242), Expect(2) = 4e-58
 Identities = 46/49 (93%), Positives = 46/49 (93%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 8   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 56


>gb|AFB18334.1| RNA polymerase beta subunit, partial (plastid) [Fosterella
           caulescens]
          Length = 1082

 Score =  152 bits (383), Expect(2) = 2e-57
 Identities = 76/94 (80%), Positives = 83/94 (88%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKT RDM
Sbjct: 45  FHKFPKIEDTDQEIEFKLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTSRDM 104

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QT+FIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 105 QEQTIFIGNIPLMNSLGTSIVNGIYRIVINQILQ 138



 Score = 97.8 bits (242), Expect(2) = 2e-57
 Identities = 46/49 (93%), Positives = 46/49 (93%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 5   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 53


>gb|AFB18349.1| RNA polymerase beta subunit, partial (plastid) [Pitcairnia
           feliciana]
          Length = 1085

 Score =  151 bits (382), Expect(2) = 2e-57
 Identities = 76/94 (80%), Positives = 83/94 (88%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LF ERYQLVEPL++ERDAVYESLTYSSELYVPAGLIWKT RDM
Sbjct: 48  FHKFPKIEDTDQEIEFKLFAERYQLVEPLLKERDAVYESLTYSSELYVPAGLIWKTSRDM 107

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 108 QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 141



 Score = 97.8 bits (242), Expect(2) = 2e-57
 Identities = 46/49 (93%), Positives = 46/49 (93%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 8   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 56


>gb|AFB18353.1| RNA polymerase beta subunit, partial (plastid) [Sparganium
           eurycarpum]
          Length = 1083

 Score =  154 bits (389), Expect(2) = 3e-57
 Identities = 78/94 (82%), Positives = 85/94 (90%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVERYQLVEPLI+ERDAVYESLT+SSELYVPAGLIWKTGRDM
Sbjct: 46  FQKFPKIEDTDQEIEFKLFVERYQLVEPLIKERDAVYESLTHSSELYVPAGLIWKTGRDM 105

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 106 QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 139



 Score = 94.7 bits (234), Expect(2) = 3e-57
 Identities = 45/49 (91%), Positives = 45/49 (91%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEF KFPKIED
Sbjct: 6   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFQKFPKIED 54


>gb|AFB18350.1| RNA polymerase beta subunit, partial (plastid) [Potarophytum
           riparium]
          Length = 1083

 Score =  154 bits (390), Expect(2) = 5e-57
 Identities = 78/94 (82%), Positives = 83/94 (88%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 46  FHKFPKIEDTDQEIEFQLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 105

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY I INQILQ
Sbjct: 106 QEQTVFIGNIPLMNSLGTSIVNGIYRIAINQILQ 139



 Score = 93.6 bits (231), Expect(2) = 5e-57
 Identities = 44/48 (91%), Positives = 44/48 (91%)
 Frame = -1

Query: 401 KLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           KLKI ML NGNEGM TIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 7   KLKIKMLRNGNEGMPTIPGFSQIQFEGFCRFINQGLPEEFHKFPKIED 54


>ref|YP_009116334.1| RNA polymerase beta subunit (chloroplast) [Ananas comosus]
           gi|746001362|dbj|BAQ19633.1| RNA polymerase beta subunit
           (chloroplast) [Ananas comosus]
           gi|910750177|gb|AKU47124.1| RNA polymerase beta subunit
           (chloroplast) [Ananas comosus]
          Length = 1072

 Score =  154 bits (390), Expect(2) = 9e-56
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFKLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 128



 Score = 89.4 bits (220), Expect(2) = 9e-56
 Identities = 41/43 (95%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 1   MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 43


>ref|YP_008854503.1| RNA polymerase beta subunit [Ravenala madagascariensis]
           gi|557636991|gb|AHA12592.1| RNA polymerase beta subunit
           [Ravenala madagascariensis]
          Length = 1074

 Score =  156 bits (395), Expect(2) = 2e-55
 Identities = 80/94 (85%), Positives = 83/94 (88%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     MEFQLFVERYQLVEPLI ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 36  FHKFPKIEDTDQEMEFQLFVERYQLVEPLINERDAVYESLTYSSELYVPAGLIWKTGRDM 95

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGT IVNGIY IVINQILQ
Sbjct: 96  QEQTVFIGNIPLMNSLGTFIVNGIYRIVINQILQ 129



 Score = 86.3 bits (212), Expect(2) = 2e-55
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = -1

Query: 389 MMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           M+  NGNEGMSTIPGFSQIQFEGFCRFIN+GL EEFHKFPKIED
Sbjct: 1   MLRNNGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIED 44


>gb|AKR80858.1| RNA polymerase beta subunit (plastid) [Xerophyta retinervis]
          Length = 1070

 Score =  153 bits (386), Expect(2) = 3e-55
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFQLFGERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIP+MNSLGTSIVNGIY I+INQILQ
Sbjct: 95  QEQTVFIGNIPIMNSLGTSIVNGIYRIMINQILQ 128



 Score = 89.0 bits (219), Expect(2) = 3e-55
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           MLW+GN GMSTIPGF+QIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 1   MLWDGNGGMSTIPGFNQIQFEGFCRFINQGLTEEFHKFPKIED 43


>gb|AFB18325.1| RNA polymerase beta subunit, partial (plastid) [Brocchinia
           micrantha]
          Length = 1085

 Score =  145 bits (365), Expect(2) = 4e-55
 Identities = 75/94 (79%), Positives = 80/94 (85%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQL EPLI+ERDAVYESLTYSSELYVPAGLI KT RDM
Sbjct: 48  FHKFPKMEDTDQEIEFQLFAERYQLAEPLIKERDAVYESLTYSSELYVPAGLILKTSRDM 107

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGT IVNGIY IVINQILQ
Sbjct: 108 QEQTVFIGNIPLMNSLGTFIVNGIYRIVINQILQ 141



 Score = 96.7 bits (239), Expect(2) = 4e-55
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = -1

Query: 404 RKLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           RKLKI ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPK+ED
Sbjct: 8   RKLKIKMLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKMED 56


>ref|YP_009130119.1| RNA polymerase beta subunit (chloroplast) [Carludovica palmata]
           gi|768803788|gb|AJV88588.1| RNA polymerase beta subunit
           (chloroplast) [Carludovica palmata]
          Length = 1070

 Score =  155 bits (392), Expect(2) = 4e-55
 Identities = 78/94 (82%), Positives = 85/94 (90%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFKLFVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIP+MNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFIGNIPIMNSLGTSIVNGIYRIVINQILQ 128



 Score = 86.3 bits (212), Expect(2) = 4e-55
 Identities = 39/43 (90%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML +GNEGMSTIPGF+QIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 1   MLRDGNEGMSTIPGFNQIQFEGFCRFINQGLTEEFHKFPKIED 43


>gb|AFB18333.1| RNA polymerase beta subunit, partial (plastid) [Flagellaria indica]
          Length = 1081

 Score =  151 bits (381), Expect(2) = 7e-55
 Identities = 79/94 (84%), Positives = 82/94 (87%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     MEFQLF ERYQLVEPLIEERDAVYESLTYSSELYVPAGLI KTGRDM
Sbjct: 45  FHKFPKIEDIDQEMEFQLFAERYQLVEPLIEERDAVYESLTYSSELYVPAGLILKTGRDM 104

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGT IVNGIY IVINQILQ
Sbjct: 105 QEQTVFIGNIPLMNSLGTFIVNGIYRIVINQILQ 138



 Score = 89.7 bits (221), Expect(2) = 7e-55
 Identities = 43/48 (89%), Positives = 43/48 (89%)
 Frame = -1

Query: 401 KLKIMMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           KLKI ML NGNEGMSTIPGFSQIQFEGF RFIN GL EEFHKFPKIED
Sbjct: 6   KLKIKMLRNGNEGMSTIPGFSQIQFEGFYRFINHGLTEEFHKFPKIED 53


>ref|YP_009141855.1| DNA-directed RNA polymerase beta chain (chloroplast) [Xerophyllum
           tenax] gi|705244214|gb|AIW56409.1| DNA-directed RNA
           polymerase beta chain (chloroplast) [Xerophyllum tenax]
          Length = 1070

 Score =  154 bits (388), Expect(2) = 7e-55
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLFVERYQLVEPLI+ERDA+ ESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FYKFPKIEDTDQEIEFQLFVERYQLVEPLIKERDAMSESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 128



 Score = 87.0 bits (214), Expect(2) = 7e-55
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEF+KFPKIED
Sbjct: 1   MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFYKFPKIED 43


>gb|AHH24325.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
          Length = 1070

 Score =  153 bits (386), Expect(2) = 7e-55
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVE YQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFKLFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVF+GNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFLGNIPLMNSLGTSIVNGIYRIVINQILQ 128



 Score = 87.8 bits (216), Expect(2) = 7e-55
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML +GNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 1   MLQDGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 43


>gb|AEZ01419.1| RNA polymerase beta subunit (chloroplast) [Japonolirion osense]
          Length = 1070

 Score =  153 bits (386), Expect(2) = 7e-55
 Identities = 77/94 (81%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVE YQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFKLFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVF+GNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFLGNIPLMNSLGTSIVNGIYRIVINQILQ 128



 Score = 87.8 bits (216), Expect(2) = 7e-55
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML +GNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED
Sbjct: 1   MLQDGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIED 43


>ref|YP_009145096.1| RNA polymerase beta subunit (chloroplast) [Podococcus barteri]
           gi|816377580|gb|AKF00237.1| RNA polymerase beta subunit
           (chloroplast) [Podococcus barteri]
           gi|827520949|gb|AKJ85806.1| RNA polymerase beta subunit
           (chloroplast) [Podococcus barteri]
          Length = 1068

 Score =  151 bits (381), Expect(2) = 7e-55
 Identities = 77/87 (88%), Positives = 80/87 (91%)
 Frame = -2

Query: 262 KTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQQQTVFI 83
           K E   +EFQLFVE Y+LVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQ+QTVFI
Sbjct: 40  KIEDQEIEFQLFVETYKLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFI 99

Query: 82  GNIPLMNSLGTSIVNGIYGIVINQILQ 2
           GNIPLMNSLGT IVNGIY IVINQILQ
Sbjct: 100 GNIPLMNSLGTFIVNGIYRIVINQILQ 126



 Score = 89.7 bits (221), Expect(2) = 7e-55
 Identities = 41/44 (93%), Positives = 42/44 (95%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIEDR 255
           ML NGNEGMSTIPGFSQIQFEGFCRFINQGL EEFHKFPKIED+
Sbjct: 1   MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTEEFHKFPKIEDQ 44


>ref|YP_007475611.1| RNA polymerase beta subunit [Heliconia collinsiana]
           gi|449326090|gb|AGE92676.1| RNA polymerase beta subunit
           [Heliconia collinsiana]
          Length = 1083

 Score =  155 bits (393), Expect(2) = 1e-54
 Identities = 79/94 (84%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVERYQLVEPLI ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 36  FHKFPKIEDTDQEIEFKLFVERYQLVEPLINERDAVYESLTYSSELYVPAGLIWKTGRDM 95

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 96  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 129



 Score = 84.3 bits (207), Expect(2) = 1e-54
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = -1

Query: 389 MMLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           M+  +GNEGMSTIPGFSQIQFEGFCRFIN+GL EEFHKFPKIED
Sbjct: 1   MLRNDGNEGMSTIPGFSQIQFEGFCRFINEGLTEEFHKFPKIED 44


>ref|YP_003433967.1| RNA polymerase beta subunit [Typha latifolia]
           gi|69216922|gb|AAZ03995.1| RNA polymerase beta chain
           [Typha latifolia] gi|281371764|gb|ADA63691.1| RNA
           polymerase beta subunit [Typha latifolia]
          Length = 1072

 Score =  156 bits (394), Expect(2) = 1e-54
 Identities = 79/94 (84%), Positives = 85/94 (90%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EF+LFVERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FQKFPKIEDTDQEIEFKLFVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQILQ
Sbjct: 95  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQILQ 128



 Score = 84.0 bits (206), Expect(2) = 1e-54
 Identities = 39/43 (90%), Positives = 39/43 (90%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           ML NGNEGMSTIPGFSQIQFEGFCRFINQGL  EF KFPKIED
Sbjct: 1   MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLTAEFQKFPKIED 43


>ref|YP_009092759.1| RNA polymerase beta subunit [Bomarea edulis]
           gi|690196834|gb|AIR12595.1| RNA polymerase beta subunit
           (plastid) [Bomarea edulis]
          Length = 1070

 Score =  155 bits (393), Expect(2) = 1e-54
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDADQEIEFQLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQ+LQ
Sbjct: 95  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQVLQ 128



 Score = 84.3 bits (207), Expect(2) = 1e-54
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           M  NGNEGM TIPGFSQIQFEGFCRF+NQGL EEFHKFPKIED
Sbjct: 1   MFRNGNEGMFTIPGFSQIQFEGFCRFMNQGLTEEFHKFPKIED 43


>gb|AGQ55667.1| RNA polymerase beta subunit (chloroplast) [Alstroemeria aurea]
          Length = 1070

 Score =  155 bits (393), Expect(2) = 1e-54
 Identities = 78/94 (82%), Positives = 84/94 (89%)
 Frame = -2

Query: 283 FISFQKLKTEFGGMEFQLFVERYQLVEPLIEERDAVYESLTYSSELYVPAGLIWKTGRDM 104
           F  F K++     +EFQLF ERYQLVEPLI+ERDAVYESLTYSSELYVPAGLIWKTGRDM
Sbjct: 35  FHKFPKIEDTDQEIEFQLFAERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDM 94

Query: 103 QQQTVFIGNIPLMNSLGTSIVNGIYGIVINQILQ 2
           Q+QTVFIGNIPLMNSLGTSIVNGIY IVINQ+LQ
Sbjct: 95  QEQTVFIGNIPLMNSLGTSIVNGIYRIVINQVLQ 128



 Score = 84.3 bits (207), Expect(2) = 1e-54
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -1

Query: 386 MLWNGNEGMSTIPGFSQIQFEGFCRFINQGLAEEFHKFPKIED 258
           M  NGNEGM TIPGFSQIQFEGFCRF+NQGL EEFHKFPKIED
Sbjct: 1   MFRNGNEGMFTIPGFSQIQFEGFCRFMNQGLTEEFHKFPKIED 43