BLASTX nr result

ID: Ophiopogon21_contig00026459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00026459
         (438 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381433.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...    72   2e-10
ref|XP_008787204.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...    62   1e-07
ref|XP_004975850.1| PREDICTED: ATP-dependent RNA helicase SUV3L,...    57   5e-06

>ref|XP_009381433.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial [Musa
           acuminata subsp. malaccensis]
          Length = 737

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 49/132 (37%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
 Frame = -2

Query: 350 LRPCSLSKLRPLLSLFHAS----------QTPHSNPKXXXXXXXGQRQSHPQLRKPQFFC 201
           LRP  LS  R LLS  H             +P  +P            S      PQ   
Sbjct: 10  LRPACLSSFRVLLSRPHPQLVLGFRLPLVPSPSPSPSSPWLPPRLFSFSTTATSSPQ--- 66

Query: 200 TSAPFPVNFD------PKSIYPDLAKLDVDSHAILPKREWESLAAILRFFTNSPWTSDQS 39
           T AP P+  D      P ++Y +L     D  A L + EWE+L  + R F  SPWTSDQ+
Sbjct: 67  TLAPDPIATDGDPPPDPAAVYRELRAAQ-DGSAKLSRSEWEALVGVFRSFAKSPWTSDQA 125

Query: 38  LAIYVPSSFFPT 3
           LA+Y+PSSFFPT
Sbjct: 126 LALYIPSSFFPT 137


>ref|XP_008787204.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase SUPV3L1,
           mitochondrial [Phoenix dactylifera]
          Length = 770

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = -2

Query: 179 NFDPKSIYPDLAKLDVDSHAILPKREWESLAAILRFFTNSPWTSDQSLAIYVPSSFFP 6
           + DP  +Y +L + D +S   L + EW SL  + R F  SPW SDQ+LA+Y+P+SFFP
Sbjct: 112 SLDPLDVYRELRRAD-ESSTRLKRSEWNSLVKVFRGFAKSPWASDQALAVYIPASFFP 168


>ref|XP_004975850.1| PREDICTED: ATP-dependent RNA helicase SUV3L, mitochondrial [Setaria
           italica] gi|944233201|gb|KQK97563.1| hypothetical
           protein SETIT_009479mg [Setaria italica]
          Length = 730

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
 Frame = -2

Query: 368 MATSLLLRPCSLSKLRPLLSLFHASQTPHSNPKXXXXXXXGQRQSHPQLRKPQFFCTSA- 192
           +A +LL R  S    R +L L      P   P              P L     F +SA 
Sbjct: 6   IAAALLRRSTSSPNHRLILPLLSHLHRPSPQPLS------------PWLPPQHRFFSSAD 53

Query: 191 ------PFPVNFDPKSIYPDLAKLDVDSHAI-LPKREWESLAAILRFFTNSPWTSDQSLA 33
                 P P   DPK ++ +L+  D  + +  LPK  W+++ A++R F  SP   DQ+LA
Sbjct: 54  TAGDPNPKPPPLDPKQLWSELSAWDPAAGSTHLPKATWDAVVALVRGFAKSPAMCDQALA 113

Query: 32  IYVPSSFFPT 3
           +YVPSS FPT
Sbjct: 114 LYVPSSAFPT 123


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