BLASTX nr result

ID: Ophiopogon21_contig00024319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00024319
         (465 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA99740.2| retrotransposon protein, putative, unclassified [...    55   5e-07
gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japo...    55   5e-07
dbj|BAT17859.1| Os12g0587133 [Oryza sativa Japonica Group]             55   6e-07

>gb|ABA99740.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1618

 Score = 55.1 bits (131), Expect(2) = 5e-07
 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
 Frame = -1

Query: 384 SLYNFLSNGGLVCP*FNLIWQNIVPLKVRIXXXXXXXXXXLTGKNLRLRHFPVDRKCVFC 205
           S Y FL +  + CP   LIW+   P +VR           LT  NL  R +P D  C+ C
Sbjct: 537 SAYEFLFSTSIKCPHGELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLC 596

Query: 204 EGVEEDSLHLFLLCPHIQXXXXXXXXXXFRLDSLP----RDLDDWW 79
           +   ED  HL + CP                  LP     +L DWW
Sbjct: 597 QSAPEDCNHLLVKCPFTNRVWQQLKAWVNVTFPLPAQLGMELADWW 642



 Score = 25.0 bits (53), Expect(2) = 5e-07
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 442 EVDSVIWRWNKTGIF 398
           E DSV+WR++  G+F
Sbjct: 519 EADSVLWRFSANGVF 533


>gb|EEE53511.1| hypothetical protein OsJ_36687 [Oryza sativa Japonica Group]
          Length = 1441

 Score = 55.1 bits (131), Expect(2) = 5e-07
 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
 Frame = -1

Query: 384 SLYNFLSNGGLVCP*FNLIWQNIVPLKVRIXXXXXXXXXXLTGKNLRLRHFPVDRKCVFC 205
           S Y FL +  + CP   LIW+   P +VR           LT  NL  R +P D  C+ C
Sbjct: 482 SAYEFLFSTSIKCPHGELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLC 541

Query: 204 EGVEEDSLHLFLLCPHIQXXXXXXXXXXFRLDSLP----RDLDDWW 79
           +   ED  HL + CP                  LP     +L DWW
Sbjct: 542 QSAPEDCNHLLVKCPFTNRVWQQLKAWVNVTFPLPAQLGMELADWW 587



 Score = 25.0 bits (53), Expect(2) = 5e-07
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 442 EVDSVIWRWNKTGIF 398
           E DSV+WR++  G+F
Sbjct: 464 EADSVLWRFSANGVF 478


>dbj|BAT17859.1| Os12g0587133 [Oryza sativa Japonica Group]
          Length = 402

 Score = 55.1 bits (131), Expect(2) = 6e-07
 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
 Frame = -1

Query: 384 SLYNFLSNGGLVCP*FNLIWQNIVPLKVRIXXXXXXXXXXLTGKNLRLRHFPVDRKCVFC 205
           S Y FL +  + CP   LIW+   P +VR           LT  NL  R +P D  C+ C
Sbjct: 231 SAYEFLFSTSIKCPHGELIWKTKAPARVRFFLWLAVKGRCLTADNLSKRGWPHDPTCLLC 290

Query: 204 EGVEEDSLHLFLLCPHIQXXXXXXXXXXFRLDSLP----RDLDDWW 79
           +   ED  HL + CP                  LP     +L DWW
Sbjct: 291 QSAPEDCNHLLVKCPFTNRVWQQLKAWVNVTFPLPAQLGMELADWW 336



 Score = 25.0 bits (53), Expect(2) = 6e-07
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 442 EVDSVIWRWNKTGIF 398
           E DSV+WR++  G+F
Sbjct: 213 EADSVLWRFSANGVF 227


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