BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00022243
         (685 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG22121.1| polyprotein [Solanum melongena]                        205   6e-83
gb|ABG22123.1| polyprotein [Prunus avium]                             191   7e-79
ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434...   195   1e-75
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]     171   2e-64
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   168   7e-64
gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]         169   3e-63
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...   165   4e-63
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   169   7e-63
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     167   1e-62
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]     168   1e-62
ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235...   155   3e-62
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...   166   5e-62
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]           166   8e-62
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   164   2e-61
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   164   2e-61
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...   165   2e-61
gb|AFB73912.1| polyprotein [Citrus sinensis]                          163   2e-61
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]     153   3e-61
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]          146   4e-61
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892...   158   1e-60

>gb|ABG22121.1| polyprotein [Solanum melongena]
          Length = 361

 Score =  205 bits (522), Expect(2) = 6e-83
 Identities = 98/137 (71%), Positives = 122/137 (89%)
 Frame = -3

Query: 683 DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
           DMLIA+ ++  ID LKAQLS EFEMKDLGEAKKILGMEI RDR++G++CLTQK YL+K+L
Sbjct: 89  DMLIAAKSQFEIDRLKAQLSKEFEMKDLGEAKKILGMEISRDRQRGKLCLTQKQYLKKVL 148

Query: 503 QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
           Q++ ++ D+K V+ PLA H KLS++LSPKT EEREYM++VPYA+AVGSLMYAMVCTR DI
Sbjct: 149 QRFGINDDSKPVSTPLAPHLKLSSQLSPKTDEEREYMAKVPYANAVGSLMYAMVCTRSDI 208

Query: 323 AEAVSMVSRYMHDPGRG 273
           ++AVS+VSRYMHDPG+G
Sbjct: 209 SQAVSVVSRYMHDPGKG 225



 Score =  130 bits (326), Expect(2) = 6e-83
 Identities = 62/94 (65%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDK-RSTAGYVFTL 104
           G  HW+AV+WILRYIK TVD+GLV+++D S      GY DSDYAGDLDK RST GY+FTL
Sbjct: 223 GKGHWQAVKWILRYIKNTVDIGLVFEQDKSLGSCVVGYCDSDYAGDLDKRRSTTGYLFTL 282

Query: 103 SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
           ++ PV W+ TLQ+T+ALS TE EYM ITEA+KEA
Sbjct: 283 AKGPVSWKSTLQATVALSTTEAEYMAITEAVKEA 316


>gb|ABG22123.1| polyprotein [Prunus avium]
          Length = 276

 Score =  191 bits (485), Expect(2) = 7e-79
 Identities = 91/137 (66%), Positives = 115/137 (83%)
 Frame = -3

Query: 683 DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
           DMLI   +K  I+ LK QLS+EFEMKDLGEA+KILGMEI RDR KG++ L QK YL+K+L
Sbjct: 4   DMLIVCKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVL 63

Query: 503 QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
           Q++ ++ ++K V+ PLA HFKLSA +SP T EE  YM+++PYASAVGSLMYAMVCTRPDI
Sbjct: 64  QRFGMNENSKPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPDI 123

Query: 323 AEAVSMVSRYMHDPGRG 273
           ++AVS+VSRYMH+PG+G
Sbjct: 124 SQAVSIVSRYMHNPGKG 140



 Score =  130 bits (328), Expect(2) = 7e-79
 Identities = 64/94 (68%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDK-RSTAGYVFTL 104
           G  HW+AV+WILRYI GTVDVGL++Q+D    Q   GYVDSDYAGDLDK RST G+VFT+
Sbjct: 138 GKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTGFVFTI 197

Query: 103 SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
           +  PV WR  LQST+ALS TE EYM +TEAIKEA
Sbjct: 198 AGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEA 231


>ref|XP_008370919.1| PREDICTED: uncharacterized protein LOC103434364 [Malus domestica]
          Length = 1100

 Score =  195 bits (496), Expect(2) = 1e-75
 Identities = 91/137 (66%), Positives = 118/137 (86%)
 Frame = -3

Query: 683 DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
           DMLI   +K  I+ LK QLS+EFEMKDLGEA+KILGMEI RDR KG++ L QK YL+K+L
Sbjct: 152 DMLITCKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVL 211

Query: 503 QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
           Q++ ++ ++K V+ PLASHFKLSA +SPKT+EE +YM+++PYA+ VGSLMYAMVCTRPDI
Sbjct: 212 QRFRMNENSKLVSTPLASHFKLSASMSPKTVEESQYMAQIPYANVVGSLMYAMVCTRPDI 271

Query: 323 AEAVSMVSRYMHDPGRG 273
           ++AVS+VSRYMH+PG+G
Sbjct: 272 SQAVSIVSRYMHNPGKG 288



 Score =  115 bits (289), Expect(2) = 1e-75
 Identities = 57/85 (67%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDK-RSTAGYVFTL 104
           G  HW+AV+WILRYI GTVDVGL++QRD    Q   GYVD DYAGDLDK RST G+VFT+
Sbjct: 286 GKGHWQAVKWILRYILGTVDVGLLFQRDKFTGQCVVGYVDFDYAGDLDKRRSTTGFVFTI 345

Query: 103 SQAPVCWRCTLQSTMALSVTETEYM 29
           +  PV WR  LQST+ALS TE EYM
Sbjct: 346 AGGPVSWRSILQSTVALSTTEAEYM 370


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score =  171 bits (434), Expect(2) = 2e-64
 Identities = 84/136 (61%), Positives = 114/136 (83%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K+ I++LKAQLSSEFEMKDLG AKKILGMEI R+R  G++ L+QK Y++K+L
Sbjct: 988  DMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVL 1047

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+  D K V+ PLA+HF+LS+ L P +  + EYMSRVPY+SAVGSLMYAMVC RPD+
Sbjct: 1048 RRFNMH-DAKPVSTPLAAHFRLSSDLCPLSDYDIEYMSRVPYSSAVGSLMYAMVCCRPDL 1106

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+V+RYM +PG+
Sbjct: 1107 SHALSVVNRYMANPGK 1122



 Score =  102 bits (254), Expect(2) = 2e-64
 Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+AV+WI RY++GT    L ++R   G     GYVDSD+AGDLD+R S  GYVFT+
Sbjct: 1121 GKEHWKAVQWIFRYLRGTSSACLQFERSRDG---LVGYVDSDFAGDLDRRRSITGYVFTI 1177

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
                V W+ +LQ+T+ALS TE EYM I EA KEA
Sbjct: 1178 GGCAVSWKASLQATVALSTTEAEYMAIFEACKEA 1211


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  168 bits (426), Expect(2) = 7e-64
 Identities = 84/136 (61%), Positives = 113/136 (83%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K+ I +LKAQLSSEFEMKDLG AKKILGMEI R R   ++ L+QK Y++K+L
Sbjct: 1223 DMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVL 1282

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+  D K V+ PLA+HF+LS+ L P++  + EYMSRVPY+SAVGSLMYAMVC+RPD+
Sbjct: 1283 RRFNMH-DAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSAVGSLMYAMVCSRPDL 1341

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1342 SHALSVVSRYMANPGK 1357



 Score =  103 bits (257), Expect(2) = 7e-64
 Identities = 52/94 (55%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDK-RSTAGYVFTL 104
            G  HW+AV+WI RY++GT    L + R   G     GYVDSD+AGDLD+ RS AGYVFT+
Sbjct: 1356 GKEHWKAVQWIFRYLRGTSSACLQFGRSRDG---LVGYVDSDFAGDLDRGRSLAGYVFTI 1412

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
                V W+ +LQ+T+ALS TE EYM I+EA KEA
Sbjct: 1413 GGCAVSWKASLQATVALSTTEAEYMAISEACKEA 1446


>gb|ABG22119.1| polyprotein [Cynara cardunculus var. scolymus]
          Length = 358

 Score =  169 bits (427), Expect(2) = 3e-63
 Identities = 85/136 (62%), Positives = 111/136 (81%)
 Frame = -3

Query: 683 DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
           DMLIAS NK  I  +K QL++EFEMKDLG+A+KI G+EI RDR+   + L+Q++Y++K+L
Sbjct: 89  DMLIASKNKEDIQLVKDQLNTEFEMKDLGKARKIFGIEISRDRKARTLTLSQRSYVEKVL 148

Query: 503 QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
           +++N+    K VN P+A+HFKLSA   P + EE+EYMSRVPY+SAVGSLMYAM+CTRPD+
Sbjct: 149 KRFNMYG-AKTVNTPIAAHFKLSACQCPDSNEEKEYMSRVPYSSAVGSLMYAMICTRPDL 207

Query: 323 AEAVSMVSRYMHDPGR 276
           A AVSMVSRYM +PGR
Sbjct: 208 AYAVSMVSRYMANPGR 223



 Score =  101 bits (251), Expect(2) = 3e-63
 Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLD-KRSTAGYVFTL 104
           G  HW+AV+W+LRY+ GT D  + +     G Q   GYVDSDY GDLD +RS  GYVFT+
Sbjct: 222 GREHWKAVQWVLRYLSGTRDYCMCFGTSRDGVQ---GYVDSDYGGDLDGRRSLTGYVFTM 278

Query: 103 SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
               + W+  LQ T+A+S TE EYM ITE  KEA
Sbjct: 279 GSCAISWKAVLQPTVAVSTTEAEYMAITEGFKEA 312


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
            copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score =  165 bits (418), Expect(2) = 4e-63
 Identities = 82/136 (60%), Positives = 111/136 (81%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+  K  I +LK  LS+EFEMKDLG A+KILGMEI+RDRE+ ++ L+Q++Y+QK+L
Sbjct: 992  DMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVL 1051

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
             ++ + S +K ++ P A++  L+A  +P++ EE+EYMSRVPYASAVGSLMYAMVCTRPD+
Sbjct: 1052 ARFGMSS-SKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDL 1110

Query: 323  AEAVSMVSRYMHDPGR 276
            A AVS+VSR+M  PGR
Sbjct: 1111 AHAVSVVSRFMGQPGR 1126



 Score =  103 bits (258), Expect(2) = 4e-63
 Identities = 54/95 (56%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDC--TGYVDSDYAGDLD-KRSTAGYVF 110
            G  HW+AV+ I RY++GT DVGL+Y     G   C  TGY DSDYAGD+D +RS  GYVF
Sbjct: 1125 GREHWQAVKRIFRYLRGTSDVGLIY----GGDTQCLVTGYSDSDYAGDVDTRRSMTGYVF 1180

Query: 109  TLSQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
            TL  + V W+ TLQ T+ LS TE EYM +TEA KE
Sbjct: 1181 TLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKE 1215


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  169 bits (427), Expect(2) = 7e-63
 Identities = 82/136 (60%), Positives = 114/136 (83%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K+ I +LKAQLSSEFEMKDLG AKKILG+EI ++R  G++ L+QK Y++K+L
Sbjct: 822  DMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGIEITKERHSGKLYLSQKGYIEKVL 881

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+  D K V+ PLA+HF+LS+ L P++  + EYMSRVPY+S VGSLMYAMVC+RPD+
Sbjct: 882  RRFNMH-DAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYSSVVGSLMYAMVCSRPDL 940

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 941  SHALSVVSRYMANPGK 956



 Score = 99.8 bits (247), Expect(2) = 7e-63
 Identities = 51/93 (54%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+AV+WI RY+ GT    L + R   G     GYVDSD+AGDLD+R S AGYVFT+
Sbjct: 955  GKEHWKAVQWIFRYLCGTSSACLQFGRSRDG---LVGYVDSDFAGDLDRRRSLAGYVFTI 1011

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
                V W+  LQ+T+ALS TE EYM I+EA KE
Sbjct: 1012 GGCAVSWKANLQATVALSTTEAEYMAISEACKE 1044


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  167 bits (423), Expect(2) = 1e-62
 Identities = 83/136 (61%), Positives = 112/136 (82%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K+ I +LKAQLSSEFEMKDLG AKKILGMEI R+R  G++ L+QK Y++K+L
Sbjct: 925  DMLIAAKDKSEIAKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVL 984

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
             ++N+  D K V+  LA+HF+LS+ L P++  + EYMSRVPY+SAV SLMYAMVC+RPD+
Sbjct: 985  HRFNMH-DAKLVSTLLAAHFRLSSDLCPQSAYDIEYMSRVPYSSAVSSLMYAMVCSRPDL 1043

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1044 SHALSVVSRYMANPGK 1059



 Score =  100 bits (249), Expect(2) = 1e-62
 Identities = 50/93 (53%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+AV+WI RY++GT    L + R + G     GYVDSD+AGDLD+R S  GYVFT+
Sbjct: 1058 GKEHWKAVQWIFRYLRGTSSACLQFGRSSDG---LVGYVDSDFAGDLDRRRSLTGYVFTV 1114

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
                V W+ +LQ+T+ALS TE EYM I+EA KE
Sbjct: 1115 GGCAVSWKASLQATVALSTTEAEYMAISEACKE 1147


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score =  168 bits (426), Expect(2) = 1e-62
 Identities = 83/136 (61%), Positives = 113/136 (83%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K+ I++LKAQLSSEFEMKDLG AKKILGMEI R+R  G++ L+QK Y++K+L
Sbjct: 895  DMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVL 954

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+  D K V+ PLA+HF+LS+ L P++  + EYMSRVPY S VGSLMYAMVC+R D+
Sbjct: 955  RRFNMH-DAKPVSTPLAAHFRLSSDLCPQSDYDIEYMSRVPYLSVVGSLMYAMVCSRLDL 1013

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1014 SHALSVVSRYMANPGK 1029



 Score = 99.4 bits (246), Expect(2) = 1e-62
 Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+ V+WI +Y++GT    L + R   G     GYVDSD+AGDLD+R S  GYVFT+
Sbjct: 1028 GKEHWKVVQWIFKYLRGTSSACLQFGRSRDG---LVGYVDSDFAGDLDRRRSLTGYVFTI 1084

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
                V W+ +LQ+T+ALS TE EYM I+EA KEA
Sbjct: 1085 GGCAVSWKASLQATVALSTTEVEYMAISEACKEA 1118


>ref|XP_009787759.1| PREDICTED: uncharacterized protein LOC104235647 [Nicotiana
           sylvestris]
          Length = 985

 Score =  155 bits (393), Expect(2) = 3e-62
 Identities = 81/136 (59%), Positives = 108/136 (79%)
 Frame = -3

Query: 683 DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
           DMLIA++N T I+ LK  LS EF+MKDLG AKKILGMEI   RE   V L+QK Y++++L
Sbjct: 353 DMLIAANNITEINALKKLLSKEFDMKDLGAAKKILGMEI--SREDDVVHLSQKRYIERVL 410

Query: 503 QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
           +++N+ +  K V+ PLA HFKLS    P++ +E E+MS++PYASAVGS+MYAMVCTRPDI
Sbjct: 411 ERFNMQT-CKPVSTPLAPHFKLSESQMPQSEDEVEHMSKIPYASAVGSIMYAMVCTRPDI 469

Query: 323 AEAVSMVSRYMHDPGR 276
           A++VS+VSRYM +PG+
Sbjct: 470 AQSVSVVSRYMSNPGK 485



 Score =  110 bits (276), Expect(2) = 3e-62
 Identities = 55/93 (59%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
           G  HWEAV+WILRY+KG   VGL +++  +G     GYVDSDYAGDLD+R ST GY+FTL
Sbjct: 484 GKRHWEAVKWILRYLKGASGVGLTFRKSGTGIS-ILGYVDSDYAGDLDRRRSTTGYIFTL 542

Query: 103 SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
             + V W+ TLQS +ALS TE EYM   EA+KE
Sbjct: 543 VGSAVSWKSTLQSIVALSTTEAEYMAAVEAVKE 575


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
            gi|18542925|gb|AAL75759.1| Putative pol polyprotein
            [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1005

 Score =  166 bits (419), Expect(2) = 5e-62
 Identities = 83/136 (61%), Positives = 108/136 (79%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K  I  LK QLSSEF+MKDLG AKKILGMEI RDR  G + L+Q++Y++ +L
Sbjct: 689  DMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKNVL 748

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            Q++N+  D K V++P+A HFKLS      T E+ EYMSRVPY+SAVGSLMYAMVC+RPD+
Sbjct: 749  QRFNMH-DAKLVSIPIAPHFKLSVLQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDL 807

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 808  SHAMSLVSRYMANPGK 823



 Score =  100 bits (248), Expect(2) = 5e-62
 Identities = 50/94 (53%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+AV+WI RY++GT D  L + R + G     GYVDSD+A DLDKR S  GYVFT+
Sbjct: 822  GKEHWKAVQWIFRYLRGTADACLKFGRTDKG---LVGYVDSDFAADLDKRRSLTGYVFTI 878

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
            S   + W+ TLQ  +A S TE EYM I EA KE+
Sbjct: 879  SSCAMSWKATLQPVVAQSTTEAEYMAIAEACKES 912


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
          Length = 1335

 Score =  166 bits (421), Expect(2) = 8e-62
 Identities = 85/136 (62%), Positives = 109/136 (80%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K  I +LK  LSSEF+MKDLG AKKILGMEI RDR+ G + L+Q  Y++K+L
Sbjct: 1019 DMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVL 1078

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            Q++N+ +  KAV+ P+A HFKLSA   P T  E EYMSRVPY+SAVGSLMYAMVC+RPD+
Sbjct: 1079 QRFNMQN-AKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1137

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1138 SYAMSLVSRYMSNPGK 1153



 Score = 98.6 bits (244), Expect(2) = 8e-62
 Identities = 51/93 (54%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW A++WI RY++GT    L + R + G     GYVDSDYA DLD+R S  GYVFT+
Sbjct: 1152 GKEHWRALQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDSDYAADLDRRRSLTGYVFTI 1208

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
                V WR TLQS +ALS TE EYM I EA KE
Sbjct: 1209 GSCAVSWRATLQSVVALSTTEAEYMAICEACKE 1241


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549942|gb|ABA92739.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1373

 Score =  164 bits (415), Expect(2) = 2e-61
 Identities = 84/136 (61%), Positives = 108/136 (79%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K  I +LK  LSSEF+MKDLG AKKILGMEI RDR+ G + L+Q  Y++K+L
Sbjct: 1017 DMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVL 1076

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            Q++N+ +  KAV+ P+A HFKLSA   P    E EYMSRVPY+SAVGSLMYAMVC+RPD+
Sbjct: 1077 QRFNMQN-AKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1135

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1136 SYAMSLVSRYMSNPGK 1151



 Score = 99.8 bits (247), Expect(2) = 2e-61
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW AV+WI RY++GT    L + R + G     GYVDSDYA DLD+R S  GYVFT+
Sbjct: 1150 GKEHWRAVQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDSDYAADLDRRRSLTGYVFTI 1206

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
                V WR TLQS +ALS TE EYM I EA KE
Sbjct: 1207 GSCAVSWRATLQSVVALSTTEAEYMAICEACKE 1239


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  164 bits (415), Expect(2) = 2e-61
 Identities = 84/136 (61%), Positives = 108/136 (79%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K  I +LK  LSSEF+MKDLG AKKILGMEI RDR+ G + L+Q  Y++K+L
Sbjct: 1017 DMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVL 1076

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            Q++N+ +  KAV+ P+A HFKLSA   P    E EYMSRVPY+SAVGSLMYAMVC+RPD+
Sbjct: 1077 QRFNMQN-AKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDL 1135

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1136 SYAMSLVSRYMSNPGK 1151



 Score = 99.8 bits (247), Expect(2) = 2e-61
 Identities = 52/93 (55%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW AV+WI RY++GT    L + R + G     GYVDSDYA DLD+R S  GYVFT+
Sbjct: 1150 GKEHWRAVQWIFRYLRGTTYSCLKFGRTDKG---LIGYVDSDYAADLDRRRSLTGYVFTI 1206

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
                V WR TLQS +ALS TE EYM I EA KE
Sbjct: 1207 GSCAVSWRATLQSVVALSTTEAEYMAICEACKE 1239


>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score =  165 bits (417), Expect(2) = 2e-61
 Identities = 84/136 (61%), Positives = 108/136 (79%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+ +K  I  LK QLSSEF+MKDLG AKKILGMEI RDR  G + L+Q++Y++K+L
Sbjct: 1006 DMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVL 1065

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            Q++N+  D K V+ P+A HFKLSA     T E+ EYMSRVPY+SAVGSLMYAMVC+ PD+
Sbjct: 1066 QRFNMH-DAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSWPDL 1124

Query: 323  AEAVSMVSRYMHDPGR 276
            + A+S+VSRYM +PG+
Sbjct: 1125 SHAMSLVSRYMANPGK 1140



 Score = 99.0 bits (245), Expect(2) = 2e-61
 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HW+AV+WI RY++GT D  L + R + G     GYVDSD+A DLDKR S  GYVFT+
Sbjct: 1139 GKEHWKAVQWIFRYLRGTADACLKFGRIDKG---LVGYVDSDFAADLDKRRSLTGYVFTI 1195

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
                V W+ TLQ  +A S TE EYM I EA KE+
Sbjct: 1196 GSCAVSWKATLQPVVAQSTTEAEYMAIAEACKES 1229


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  163 bits (412), Expect(2) = 2e-61
 Identities = 82/135 (60%), Positives = 105/135 (77%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DML+A  NK  I ELKAQL+ EFEMKDLG A KILGM+I RDR   ++ L+QK YL+K+L
Sbjct: 992  DMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKIL 1051

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+  D K+++ PL  +FKLS+ + P    ER+ MSRVPYASAVGSLM+AM+CTRPDI
Sbjct: 1052 RRFNMQ-DCKSISTPLPVNFKLSSSMCPSNEAERKEMSRVPYASAVGSLMFAMICTRPDI 1110

Query: 323  AEAVSMVSRYMHDPG 279
            A+AV  VSRYM +PG
Sbjct: 1111 AQAVGAVSRYMANPG 1125



 Score =  100 bits (249), Expect(2) = 2e-61
 Identities = 55/94 (58%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            GG HW AV+ ILRYI+GT +V L Y      +    GYVDSD+AGDLDKR ST GYVFTL
Sbjct: 1125 GGEHWIAVKRILRYIRGTSNVALCY---GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTL 1181

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
            + A V W   LQ+ +ALS TE EYM  T+A KEA
Sbjct: 1182 AGAAVSWVSKLQTVVALSTTEAEYMAATQACKEA 1215


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score =  153 bits (387), Expect(2) = 3e-61
 Identities = 73/136 (53%), Positives = 107/136 (78%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA  +   I +LK +L +EF+MKDLG A+KILG+EI RDR  G++ L+Q+ Y+ K+L
Sbjct: 983  DMLIACRDMLQIQKLKKKLGAEFDMKDLGAAQKILGIEIRRDRNAGKIWLSQEKYIMKIL 1042

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
            +++N+ ++ K V++PLA+HF+LSA+  P   +E + M  VPYASAVG LMYAM+CTRPD+
Sbjct: 1043 ERFNM-AEAKVVSIPLAAHFRLSAEQRPSDQKEIDMMKNVPYASAVGCLMYAMICTRPDL 1101

Query: 323  AEAVSMVSRYMHDPGR 276
            A+A+S+VS+YM +PG+
Sbjct: 1102 AQAMSVVSKYMSNPGK 1117



 Score =  109 bits (273), Expect(2) = 3e-61
 Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDKR-STAGYVFTL 104
            G  HWEAV+WI +Y+K T  +G++++R   G+    G+VDSD+AGDLD+R STAGYVFT 
Sbjct: 1116 GKRHWEAVKWIFKYLKNTRQLGIMFER-RQGEACVAGFVDSDFAGDLDRRRSTAGYVFTC 1174

Query: 103  SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
               PV W+ TLQ+  ALS TE EYM +TEA KEA
Sbjct: 1175 GGGPVSWKATLQAVTALSTTEAEYMALTEASKEA 1208


>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
          Length = 297

 Score =  146 bits (369), Expect(2) = 4e-61
 Identities = 70/112 (62%), Positives = 93/112 (83%)
 Frame = -3

Query: 611 MKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLLQKYNVDSDTKAVNVPLASHFKLSA 432
           MK LG+A++ILGM+I RD++   V LTQK+YL+K+L+++ +D  TK V  PLA HFKLS+
Sbjct: 1   MKGLGDAQRILGMKIRRDKKNESVWLTQKSYLKKVLERFGMDDKTKLVCTPLALHFKLSS 60

Query: 431 KLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDIAEAVSMVSRYMHDPGR 276
              P++ EER+YM+ VPYAS VGSL+YAMVCTRPDI++AVSMVSRYMH+PG+
Sbjct: 61  SSCPRSQEERDYMACVPYASVVGSLIYAMVCTRPDISQAVSMVSRYMHNPGK 112



 Score =  116 bits (290), Expect(2) = 4e-61
 Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = -1

Query: 280 GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDCTGYVDSDYAGDLDK-RSTAGYVFTL 104
           G   W AV+WILRY+ GTVDVGL++++ N G+Q C GY DSD+AGDLDK RST+GYVFTL
Sbjct: 111 GKSQWLAVKWILRYLYGTVDVGLLFKK-NCGQQ-CVGYCDSDFAGDLDKQRSTSGYVFTL 168

Query: 103 SQAPVCWRCTLQSTMALSVTETEYMVITEAIKEA 2
               V WR  LQST+ALS TE EY+  TEA+KEA
Sbjct: 169 GGGSVSWRSILQSTIALSTTEAEYIAATEAVKEA 202


>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
            vulgaris]
          Length = 1947

 Score =  158 bits (400), Expect(2) = 1e-60
 Identities = 80/136 (58%), Positives = 109/136 (80%)
 Frame = -3

Query: 683  DMLIASSNKTAIDELKAQLSSEFEMKDLGEAKKILGMEIVRDREKGRVCLTQKAYLQKLL 504
            DMLIA+  K+ + +LK  LSSEF+MKDLG AKKILGMEI RD  + ++ L+QK+Y+ K+L
Sbjct: 1105 DMLIAAKKKSDVLKLKKLLSSEFDMKDLGAAKKILGMEIYRDHGRKKLFLSQKSYILKVL 1164

Query: 503  QKYNVDSDTKAVNVPLASHFKLSAKLSPKTIEEREYMSRVPYASAVGSLMYAMVCTRPDI 324
             ++ + S  K+++ P A++ +LS  LSP++ EE+EYMS+VPYASAVGSLMYAMVCTRPD+
Sbjct: 1165 DRFGM-STAKSIDTPAAANARLSVVLSPQSDEEKEYMSKVPYASAVGSLMYAMVCTRPDL 1223

Query: 323  AEAVSMVSRYMHDPGR 276
            A AVS+VSR+M  PG+
Sbjct: 1224 AHAVSVVSRFMTQPGK 1239



 Score =  102 bits (255), Expect(2) = 1e-60
 Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = -1

Query: 280  GGVHWEAVRWILRYIKGTVDVGLVYQRDNSGKQDC--TGYVDSDYAGDLD-KRSTAGYVF 110
            G  HW+AV+ I RY++GT DVGL+Y  D     +C  TGY DSDYAGD+D +RS  GYV+
Sbjct: 1238 GKEHWQAVKRIFRYLRGTADVGLIYGNDT----ECLVTGYSDSDYAGDIDTRRSMTGYVY 1293

Query: 109  TLSQAPVCWRCTLQSTMALSVTETEYMVITEAIKE 5
            TL  + V W+ TLQS++ LS TE EYM +T A KE
Sbjct: 1294 TLGGSVVSWKATLQSSVTLSTTEAEYMALTAAAKE 1328