BLASTX nr result

ID: Ophiopogon21_contig00022070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00022070
         (577 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010923283.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    57   6e-06
ref|XP_010923282.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    57   6e-06

>ref|XP_010923283.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like isoform
           X2 [Elaeis guineensis]
          Length = 951

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
 Frame = -3

Query: 320 DPRREKFPDRDRVRDSVEKER-------------GSHRKWKDHDHEQDDGENNGDRKRAR 180
           DP R +     R RDSVE++R              S RK KDH+ + ++ + NG  KR R
Sbjct: 103 DPERRRERSSSRARDSVERDRVSREQSVERHHHLSSSRKRKDHEGDPEELDKNG--KRVR 160

Query: 179 ASD----ERKERRRFEE----NGDYKVKXXXXXXXXXXXSGRMR--------KRGGRRFS 48
            SD    E++ERRRFE+    NG YK +              M         ++ GRRFS
Sbjct: 161 ISDGSREEKRERRRFEDSSELNGVYKEERISKDGRKEGGLRAMEEDREENRPRKEGRRFS 220

Query: 47  DAVKVKEEAKMGERK 3
           D+VK  E+    E K
Sbjct: 221 DSVKAGEKEYEDEPK 235


>ref|XP_010923282.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like isoform
           X1 [Elaeis guineensis]
          Length = 953

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
 Frame = -3

Query: 320 DPRREKFPDRDRVRDSVEKER-------------GSHRKWKDHDHEQDDGENNGDRKRAR 180
           DP R +     R RDSVE++R              S RK KDH+ + ++ + NG  KR R
Sbjct: 103 DPERRRERSSSRARDSVERDRVSREQSVERHHHLSSSRKRKDHEGDPEELDKNG--KRVR 160

Query: 179 ASD----ERKERRRFEE----NGDYKVKXXXXXXXXXXXSGRMR--------KRGGRRFS 48
            SD    E++ERRRFE+    NG YK +              M         ++ GRRFS
Sbjct: 161 ISDGSREEKRERRRFEDSSELNGVYKEERISKDGRKEGGLRAMEEDREENRPRKEGRRFS 220

Query: 47  DAVKVKEEAKMGERK 3
           D+VK  E+    E K
Sbjct: 221 DSVKAGEKEYEDEPK 235


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