BLASTX nr result

ID: Ophiopogon21_contig00021058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00021058
         (464 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008806176.1| PREDICTED: pre-mRNA-splicing factor CWC25 ho...    55   5e-10
ref|XP_008806177.1| PREDICTED: pre-mRNA-splicing factor CWC25 ho...    55   5e-10
ref|XP_009381662.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   1e-09
ref|XP_010928163.1| PREDICTED: pre-mRNA-splicing factor CWC25 ho...    45   3e-07
ref|XP_010096517.1| hypothetical protein L484_017969 [Morus nota...    43   4e-06

>ref|XP_008806176.1| PREDICTED: pre-mRNA-splicing factor CWC25 homolog isoform X1
           [Phoenix dactylifera]
          Length = 503

 Score = 55.1 bits (131), Expect(2) = 5e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 138 KQQEQGNPHTESTKRPGYNSRKGVPKMTDEEREGRLREMQLDAELH 1
           KQ +  NP     ++PGYN R+G+ KM++EER  RLREMQL+AELH
Sbjct: 388 KQTDTQNPQ----EKPGYNHRRGITKMSEEERAARLREMQLNAELH 429



 Score = 35.4 bits (80), Expect(2) = 5e-10
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
 Frame = -1

Query: 461 SSSRHEKHXXXXXXXXXXXXXXXXXXRKN-------RKESNLKLGRLSSRVRSDARYSSE 303
           S+S+H+KH                  RK         + S  K  + +  V SD + +S+
Sbjct: 263 SNSKHDKHTYRVQSYLKKTSDDEEEKRKRDRSISELHRHSYSKHDKHTFTVHSDLKKTSD 322

Query: 302 SEEDRRKGGRSTSDHHCQHSHARYPSRLSEG--------DEERRKHVPSASEHHHPIPEP 147
            EE++RK   S S+ H +H+++++    S G        +E  +K   S S+H H   E 
Sbjct: 323 DEEEKRKRDHSISELH-RHNYSKHEKHSSRGRSDSKYQREEASKKSDLSKSDHLHRSSEL 381

Query: 146 G 144
           G
Sbjct: 382 G 382


>ref|XP_008806177.1| PREDICTED: pre-mRNA-splicing factor CWC25 homolog isoform X2
           [Phoenix dactylifera]
          Length = 411

 Score = 55.1 bits (131), Expect(2) = 5e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 138 KQQEQGNPHTESTKRPGYNSRKGVPKMTDEEREGRLREMQLDAELH 1
           KQ +  NP     ++PGYN R+G+ KM++EER  RLREMQL+AELH
Sbjct: 296 KQTDTQNPQ----EKPGYNHRRGITKMSEEERAARLREMQLNAELH 337



 Score = 35.4 bits (80), Expect(2) = 5e-10
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
 Frame = -1

Query: 461 SSSRHEKHXXXXXXXXXXXXXXXXXXRKN-------RKESNLKLGRLSSRVRSDARYSSE 303
           S+S+H+KH                  RK         + S  K  + +  V SD + +S+
Sbjct: 171 SNSKHDKHTYRVQSYLKKTSDDEEEKRKRDRSISELHRHSYSKHDKHTFTVHSDLKKTSD 230

Query: 302 SEEDRRKGGRSTSDHHCQHSHARYPSRLSEG--------DEERRKHVPSASEHHHPIPEP 147
            EE++RK   S S+ H +H+++++    S G        +E  +K   S S+H H   E 
Sbjct: 231 DEEEKRKRDHSISELH-RHNYSKHEKHSSRGRSDSKYQREEASKKSDLSKSDHLHRSSEL 289

Query: 146 G 144
           G
Sbjct: 290 G 290


>ref|XP_009381662.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Musa
           acuminata subsp. malaccensis]
          Length = 321

 Score = 58.2 bits (139), Expect(2) = 1e-09
 Identities = 28/57 (49%), Positives = 37/57 (64%)
 Frame = -3

Query: 171 ASSSHP*AWQ*KQQEQGNPHTESTKRPGYNSRKGVPKMTDEEREGRLREMQLDAELH 1
           AS  H    +   +++    +   ++PGYN R+GVPKM +EER  RLREMQLDAELH
Sbjct: 191 ASEQHHTDSELGMEDKNRETSRQREQPGYNRRRGVPKMLEEERAARLREMQLDAELH 247



 Score = 31.2 bits (69), Expect(2) = 1e-09
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 19/89 (21%)
 Frame = -1

Query: 374 RKESNLKLGRLSSRVRSDARYSSESEEDRRKGGRSTSDHHCQHSHARYPS---------- 225
           ++E   K  + SSR +SD+  + E  E ++K    T +H+ QH  ++Y            
Sbjct: 81  QQEGRSKRRKHSSRDQSDSEDAKEGAEGKKKSDCPTYEHY-QHRSSKYDKHSLKDYSDSR 139

Query: 224 RLSEGDE---------ERRKHVPSASEHH 165
           R  E +E         ER++H+ S +E H
Sbjct: 140 RAGECEEEGKYRHTILERQQHIHSKNEKH 168


>ref|XP_010928163.1| PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Elaeis
           guineensis]
          Length = 456

 Score = 45.4 bits (106), Expect(2) = 3e-07
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = -3

Query: 99  KRPGYNSRKGVPKMTDEEREGRLREMQLDAELH 1
           + PGY  R+GV KM++EER   LREM LDAELH
Sbjct: 357 QEPGYKRRQGVLKMSEEERAAWLREMPLDAELH 389



 Score = 35.8 bits (81), Expect(2) = 3e-07
 Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = -1

Query: 362 NLKLGRLSSRVRSDARYSSESEEDRRKGGRSTSDH-HCQHSHARYPSR-----LSEGDEE 201
           N K  + + +V S+ +  S+ EE R++       H HC     ++ SR       + +EE
Sbjct: 264 NSKHDKHADKVHSELKNMSDGEEKRKRYFSMLEHHQHCYSKQGKHSSRGRAESKYQSEEE 323

Query: 200 RRKHVPSASEHHH 162
            +K   S SEHHH
Sbjct: 324 GKKSNVSKSEHHH 336


>ref|XP_010096517.1| hypothetical protein L484_017969 [Morus notabilis]
           gi|587875528|gb|EXB64637.1| hypothetical protein
           L484_017969 [Morus notabilis]
          Length = 403

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -3

Query: 111 TESTKRPGYNSRKGVPKMTDEEREGRLREMQLDAELH 1
           TE      Y  R   PK+++EER  RLREMQ+DAE+H
Sbjct: 295 TEDRSESHYRRRNVAPKLSEEERAARLREMQMDAEVH 331



 Score = 34.3 bits (77), Expect(2) = 4e-06
 Identities = 28/100 (28%), Positives = 42/100 (42%)
 Frame = -1

Query: 464 DSSSRHEKHXXXXXXXXXXXXXXXXXXRKNRKESNLKLGRLSSRVRSDARYSSESEEDRR 285
           DSSS+H+KH                        S  +  R  SR  ++    S+SEE+RR
Sbjct: 188 DSSSKHQKH----------------------SSSGKEEERRKSRKSANHDKHSDSEEERR 225

Query: 284 KGGRSTSDHHCQHSHARYPSRLSEGDEERRKHVPSASEHH 165
           K  +S+  +H +HS +   SR      ER  +  S  + H
Sbjct: 226 KSRKSS--NHDKHSDSEDESRRKSSRSERNGYRSSKYKEH 263


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