BLASTX nr result

ID: Ophiopogon21_contig00020678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00020678
         (358 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]                 40   3e-06
ref|XP_008663016.1| PREDICTED: putative ribonuclease H protein A...    39   5e-06

>emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]
          Length = 1186

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -2

Query: 330  DGFKWRWDKSGIYSVKSFYDFLIDGGKTCAFHNTVWQKLAPSKVKF 193
            D F W+W+ SG YS +S Y  L   G+       +W+ LAP + +F
Sbjct: 991  DSFSWKWESSGQYSSRSSYKALF-FGRISFLSTPIWKSLAPPRCRF 1035



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -1

Query: 199  KIHVWLMIHDGLLTGERLRIRHCIRFQACLFCNKQEDSSYHIFVGC 62
            +  +WL+  +   T +RLR R       C+ C++QE+S  HI VGC
Sbjct: 1034 RFFLWLVAMNKCWTADRLRSRGLPHPDRCVLCDQQEESIDHILVGC 1079


>ref|XP_008663016.1| PREDICTED: putative ribonuclease H protein At1g65750 [Zea mays]
          Length = 562

 Score = 38.9 bits (89), Expect(2) = 5e-06
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -2

Query: 330 DGFKWRWDKSGIYSVKSFYDFLIDGGKTCAFHNTVWQKLAPSKVKF 193
           D   WR   SG+YS KS Y     G  T      +W+  APSK KF
Sbjct: 366 DKHSWRLSSSGLYSAKSAYTGFFLGATTFKPWERIWKSWAPSKCKF 411



 Score = 38.1 bits (87), Expect(2) = 5e-06
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -1

Query: 199 KIHVWLMIHDGLLTGERLRIRHCIRFQACLFCNKQEDSSYHIFVGC 62
           K  +WL+ HD   T +RL  R     Q C  C+++E++  H+ V C
Sbjct: 410 KFFMWLVAHDRCWTADRLAKRGLPHPQFCTLCDQEEETINHLLVSC 455


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