BLASTX nr result
ID: Ophiopogon21_contig00020236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon21_contig00020236
(470 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AKF00970.1| hypothetical chloroplast RF68 (chloroplast) [Arec... 109 2e-28
gb|AKF00216.1| hypothetical chloroplast RF68 (chloroplast) [Pela... 121 8e-28
ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana... 128 2e-27
ref|NP_039436.1| hypothetical protein OrsajCp079 [Oryza sativa J... 122 2e-27
ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dacty... 121 2e-27
gb|AKF00141.1| hypothetical chloroplast RF68 (chloroplast) [Oran... 121 4e-27
ref|YP_009092726.1| hypothetical chloroplast RF68 [Eustrephus la... 120 4e-27
gb|AKU47180.1| hypothetical chloroplast RF68 (chloroplast) [Anan... 118 7e-27
dbj|BAD05510.1| ORF133; ORF within trnI intron [Oryza sativa Jap... 120 1e-26
gb|AAM08575.1|AC092750_9 Hypothetical protein ORF133 from chromo... 119 3e-26
ref|YP_009166652.1| hypothetical protein ycf68 (chloroplast) [Ep... 117 3e-26
ref|YP_009161600.1| hypothetical protein ycf68 (chloroplast) [Pi... 119 6e-26
dbj|BAD17339.1| rice chloroplast ORF133; ORF within trnI intron ... 117 2e-25
gb|AKF01342.1| hypothetical chloroplast RF68 (chloroplast) [Dict... 121 2e-25
gb|AGY48999.1| hypothetical protein (chloroplast) [Oryza rufipog... 120 3e-25
ref|XP_003604154.1| ycf68 protein [Medicago truncatula] gi|35550... 97 1e-24
ref|YP_009145038.1| hypothetical protein ycf68 (chloroplast) [Di... 112 1e-24
ref|YP_009180544.1| Ycf68 (chloroplast) [Stipa lipskyi] gi|95324... 117 4e-24
ref|YP_009072974.1| hypothetical chloroplast RF68 (plastid) [Dan... 117 4e-24
gb|AGP51191.1| hypothetical chloroplast RF68 (chloroplast) [Trit... 116 6e-24
>gb|AKF00970.1| hypothetical chloroplast RF68 (chloroplast) [Areca vestiaria]
Length = 119
Score = 109 bits (273), Expect(3) = 2e-28
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 35 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 94
Query: 183 IVPFE 169
IVPFE
Sbjct: 95 IVPFE 99
Score = 34.3 bits (77), Expect(3) = 2e-28
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2
Query: 160 VPFEPF*ILMLFSEVRRKQQTI*FP 86
VPFEPF MLF EV RKQQ+I FP
Sbjct: 96 VPFEPF-FFMLFPEVWRKQQSIGFP 119
Score = 29.3 bits (64), Expect(3) = 2e-28
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 425 DSGENQFRYNLVFTRGIQTVQG 360
+SGE Q R N +FTRGI+ V+G
Sbjct: 14 NSGEIQCRSNFLFTRGIRAVRG 35
>gb|AKF00216.1| hypothetical chloroplast RF68 (chloroplast) [Pelagodoxa henryana]
gi|816378097|gb|AKF00747.1| hypothetical chloroplast
RF68 (chloroplast) [Satakentia liukiuensis]
gi|816378236|gb|AKF00884.1| hypothetical chloroplast
RF68 (chloroplast) [Veitchia spiralis]
gi|816378250|gb|AKF00898.1| hypothetical chloroplast
RF68 (chloroplast) [Veitchia spiralis]
gi|816378397|gb|AKF01043.1| hypothetical chloroplast
RF68 (chloroplast) [Attalea speciosa]
gi|816378474|gb|AKF01119.1| hypothetical chloroplast
RF68 (chloroplast) [Bactris major]
gi|816378561|gb|AKF01205.1| hypothetical chloroplast
RF68 (chloroplast) [Beccariophoenix madagascariensis]
gi|816378774|gb|AKF01415.1| hypothetical chloroplast
RF68 (chloroplast) [Drymophloeus litigiosus]
gi|816378852|gb|AKF01492.1| hypothetical chloroplast
RF68 (chloroplast) [Dypsis decaryi]
gi|816378866|gb|AKF01506.1| hypothetical chloroplast
RF68 (chloroplast) [Dypsis decaryi]
gi|816378936|gb|AKF01575.1| hypothetical chloroplast
RF68 (chloroplast) [Geonoma undata subsp. dussiana]
gi|816379013|gb|AKF01651.1| hypothetical chloroplast
RF68 (chloroplast) [Heterospathe cagayanensis]
gi|816379025|gb|AKF01663.1| hypothetical chloroplast
RF68 (chloroplast) [Heterospathe cagayanensis]
gi|816379093|gb|AKF01730.1| hypothetical chloroplast
RF68 (chloroplast) [Hydriastele microspadix]
gi|816379105|gb|AKF01742.1| hypothetical chloroplast
RF68 (chloroplast) [Hydriastele microspadix]
gi|816379177|gb|AKF01813.1| hypothetical chloroplast
RF68 (chloroplast) [Iriartea deltoidea]
gi|816379190|gb|AKF01826.1| hypothetical chloroplast
RF68 (chloroplast) [Iriartea deltoidea]
gi|816379403|gb|AKF02036.1| hypothetical chloroplast
RF68 (chloroplast) [Manicaria saccifera]
gi|816379417|gb|AKF02050.1| hypothetical chloroplast
RF68 (chloroplast) [Manicaria saccifera]
Length = 115
Score = 121 bits (303), Expect(2) = 8e-28
Identities = 62/89 (69%), Positives = 69/89 (77%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 35 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 94
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 95 IVPFEP--------FFSCFSRRSGESSNQ 115
Score = 29.3 bits (64), Expect(2) = 8e-28
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 425 DSGENQFRYNLVFTRGIQTVQG 360
+SGE Q R N +FTRGI+ V+G
Sbjct: 14 NSGEIQCRSNFLFTRGIRAVRG 35
>ref|YP_358635.1| ORF170 [Phalaenopsis aphrodite subsp. formosana]
gi|58802851|gb|AAW82571.1| ORF170 [Phalaenopsis
aphrodite subsp. formosana]
Length = 170
Score = 128 bits (321), Expect = 2e-27
Identities = 71/127 (55%), Positives = 81/127 (63%)
Frame = -3
Query: 390 IHSWDPDGSGGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRS 211
IHSWDP G GGPP L SR SIHPLSVYGQL L+HR RFGLN K++HLTTHLHRPRT RS
Sbjct: 7 IHSWDPGGPGGPPRLLSSRESIHPLSVYGQLSLEHRLRFGLNEKMEHLTTHLHRPRTTRS 66
Query: 210 LISFKGNGGIVPFEEGSYHSSLFKF*CFSRKSGESNKQYNFPNPPFLKGRT*NIFPF*WD 31
+SF G+ GI+PFE + L K N+ + P K +FPF D
Sbjct: 67 PLSFWGDRGIIPFEPFFHAGGL--------KKAAINRIFRI--LPSRKEEREILFPFRRD 116
Query: 30 QEIGSSH 10
QEIGSSH
Sbjct: 117 QEIGSSH 123
>ref|NP_039436.1| hypothetical protein OrsajCp079 [Oryza sativa Japonica Group]
gi|11466857|ref|NP_039454.1| hypothetical protein
OrsajCp099 [Oryza sativa Japonica Group]
gi|50234028|ref|YP_052805.1| hypothetical protein
OrniCp079 (chloroplast) [Oryza nivara]
gi|50234050|ref|YP_052827.1| hypothetical protein
OrniCp101 (chloroplast) [Oryza nivara]
gi|386799211|ref|YP_006280800.1| ycf68 gene product
(chloroplast) [Oryza rufipogon]
gi|386799225|ref|YP_006280814.1| ycf68 gene product
(chloroplast) [Oryza rufipogon]
gi|140503|sp|P12173.1|YCF68_ORYSJ RecName:
Full=Uncharacterized protein ycf68; AltName: Full=ORF133
gi|68566180|sp|Q6ENB7.1|YCF68_ORYNI RecName:
Full=Uncharacterized protein ycf68; AltName: Full=ORF133
gi|152129930|sp|P0C305.1|YCF68_ORYSI RecName:
Full=Uncharacterized protein ycf68
gi|152924875|sp|P0C304.1|YCF68_ORYSA RecName:
Full=Uncharacterized protein ycf68
gi|12041|emb|CAA33945.1| unnamed protein product
(chloroplast) [Oryza sativa Japonica Group]
gi|12061|emb|CAA33915.1| unnamed protein product
(chloroplast) [Oryza sativa Japonica Group]
gi|49615052|dbj|BAD26835.1| unnamed protein product
(chloroplast) [Oryza nivara] gi|49615074|dbj|BAD26857.1|
unnamed protein product (chloroplast) [Oryza nivara]
gi|336326955|gb|AEI53132.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza rufipogon]
gi|336326969|gb|AEI53146.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza rufipogon]
gi|353685100|gb|AER12865.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza sativa Indica Group]
gi|353685114|gb|AER12879.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza sativa Indica Group]
gi|353685187|gb|AER12951.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza sativa Indica Group]
gi|353685199|gb|AER12963.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza sativa Indica Group]
gi|555946033|gb|AGZ19259.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza rufipogon]
gi|555946052|gb|AGZ19278.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza rufipogon]
gi|744671524|gb|AJC99360.1| Ycf68 (chloroplast) [Oryza
sativa Japonica Group] gi|744671538|gb|AJC99374.1| Ycf68
(chloroplast) [Oryza sativa Japonica Group]
gi|744671634|gb|AJC99447.1| Ycf68 (chloroplast) [Oryza
sativa Japonica Group] gi|744671648|gb|AJC99461.1| Ycf68
(chloroplast) [Oryza sativa Japonica Group]
gi|929982722|gb|ALF35976.1| hypothetical chloroplast
RF68 (chloroplast) [Oryza sativa Aromatic Japonica
Group] gi|929982736|gb|ALF35990.1| hypothetical
chloroplast RF68 (chloroplast) [Oryza sativa Aromatic
Japonica Group] gi|929982800|gb|ALF36053.1| hypothetical
chloroplast RF68 (chloroplast) [Oryza sativa Tropical
Japonica Group] gi|929982814|gb|ALF36067.1| hypothetical
chloroplast RF68 (chloroplast) [Oryza sativa Tropical
Japonica Group] gi|226660|prf||1603356CL trnI intron ORF
133 [Oryza sativa]
Length = 133
Score = 122 bits (306), Expect(2) = 2e-27
Identities = 67/104 (64%), Positives = 76/104 (73%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGTTVALLFSSIHTSLISVWTTISQAQI*V 275
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+ V
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEV 74
Query: 274 RPQWKNRSPNNASAQTKNYEIPHFXXXXXXXXXXXXXIVPFEPF 143
RPQW+N +PNNAS+QTKNYEI IVPFEPF
Sbjct: 75 RPQWENGAPNNASSQTKNYEI-------TLSFWGDGGIVPFEPF 111
Score = 26.6 bits (57), Expect(2) = 2e-27
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 137 FNAFLGSPEKATNNIISLILPS 72
F+AF G EKA N SLILPS
Sbjct: 112 FHAFPGGLEKAAINRTSLILPS 133
>ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dactylifera]
gi|292559577|ref|YP_003540992.1| hypothetical
chloroplast RF68 [Phoenix dactylifera]
gi|377819425|ref|YP_005097920.1| hypothetical protein
ycf68 (chloroplast) [Colocasia esculenta]
gi|377819438|ref|YP_005097933.1| hypothetical protein
ycf68 (chloroplast) [Colocasia esculenta]
gi|836614513|ref|YP_009145151.1| hypothetical
chloroplast RF68 (chloroplast) [Podococcus barteri]
gi|836614527|ref|YP_009145165.1| hypothetical
chloroplast RF68 (chloroplast) [Podococcus barteri]
gi|294620624|gb|ADF28193.1| hypothetical chloroplast
RF68 (chloroplast) [Phoenix dactylifera]
gi|294620638|gb|ADF28207.1| hypothetical chloroplast
RF68 (chloroplast) [Phoenix dactylifera]
gi|340536686|gb|AEK48453.1| hypothetical protein ycf68
(chloroplast) [Colocasia esculenta]
gi|340536699|gb|AEK48466.1| hypothetical protein ycf68
(chloroplast) [Colocasia esculenta]
gi|340536773|gb|AEK48539.1| hypothetical protein ycf68
(chloroplast) [Colocasia esculenta]
gi|340536786|gb|AEK48552.1| hypothetical protein ycf68
(chloroplast) [Colocasia esculenta]
gi|827521003|gb|AKJ85860.1| hypothetical chloroplast
RF68 (chloroplast) [Podococcus barteri]
gi|827521017|gb|AKJ85874.1| hypothetical chloroplast
RF68 (chloroplast) [Podococcus barteri]
Length = 114
Score = 121 bits (303), Expect(2) = 2e-27
Identities = 62/89 (69%), Positives = 69/89 (77%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 34 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 93
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 94 IVPFEP--------FFSCFSRRSGESSNQ 114
Score = 27.7 bits (60), Expect(2) = 2e-27
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 422 SGENQFRYNLVFTRGIQTVQG 360
+GE Q R N +FTRGI+ V+G
Sbjct: 14 NGEIQCRSNFLFTRGIRAVRG 34
>gb|AKF00141.1| hypothetical chloroplast RF68 (chloroplast) [Orania palindan]
Length = 115
Score = 121 bits (303), Expect(2) = 4e-27
Identities = 62/89 (69%), Positives = 69/89 (77%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 35 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 94
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 95 IVPFEP--------FFSCFSRRSGESSNQ 115
Score = 26.9 bits (58), Expect(2) = 4e-27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 425 DSGENQFRYNLVFTRGIQTVQG 360
+SG Q R N +FTRGI+ V+G
Sbjct: 14 NSGAIQCRSNFLFTRGIRAVRG 35
>ref|YP_009092726.1| hypothetical chloroplast RF68 [Eustrephus latifolius]
gi|712911746|ref|YP_009092740.1| hypothetical
chloroplast RF68 [Eustrephus latifolius]
gi|690196783|gb|AIR12555.1| hypothetical chloroplast
RF68 [Eustrephus latifolius] gi|690196795|gb|AIR12567.1|
hypothetical chloroplast RF68 [Eustrephus latifolius]
Length = 114
Score = 120 bits (301), Expect(2) = 4e-27
Identities = 62/89 (69%), Positives = 68/89 (76%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS SF G+GG
Sbjct: 34 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPFSFWGDGG 93
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 94 IVPFEP--------FFSCFSRRSGESSNQ 114
Score = 27.7 bits (60), Expect(2) = 4e-27
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 422 SGENQFRYNLVFTRGIQTVQG 360
+GE Q R N +FTRGI+ V+G
Sbjct: 14 NGEIQCRSNFLFTRGIRAVRG 34
>gb|AKU47180.1| hypothetical chloroplast RF68 (chloroplast) [Ananas comosus]
gi|910750251|gb|AKU47198.1| hypothetical chloroplast
RF68 (chloroplast) [Ananas comosus]
Length = 115
Score = 118 bits (295), Expect(2) = 7e-27
Identities = 61/89 (68%), Positives = 67/89 (75%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL +HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 35 GGPPRLLSSRESIHPLSVYGQLSFEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 94
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES Q
Sbjct: 95 IVPFEP--------FFSCFSRRSGESCNQ 115
Score = 29.3 bits (64), Expect(2) = 7e-27
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 425 DSGENQFRYNLVFTRGIQTVQG 360
+SGE Q R N +FTRGI+ V+G
Sbjct: 14 NSGEIQCRSNFLFTRGIRAVRG 35
>dbj|BAD05510.1| ORF133; ORF within trnI intron [Oryza sativa Japonica Group]
Length = 133
Score = 120 bits (300), Expect(2) = 1e-26
Identities = 66/104 (63%), Positives = 75/104 (72%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGTTVALLFSSIHTSLISVWTTISQAQI*V 275
KLLL RIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+ V
Sbjct: 15 KLLLTRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEV 74
Query: 274 RPQWKNRSPNNASAQTKNYEIPHFXXXXXXXXXXXXXIVPFEPF 143
RPQW+N +PNNAS+QTKNYEI IVPFEPF
Sbjct: 75 RPQWENGAPNNASSQTKNYEI-------TLSFWGDGGIVPFEPF 111
Score = 26.6 bits (57), Expect(2) = 1e-26
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 137 FNAFLGSPEKATNNIISLILPS 72
F+AF G EKA N SLILPS
Sbjct: 112 FHAFPGGLEKAAINRTSLILPS 133
>gb|AAM08575.1|AC092750_9 Hypothetical protein ORF133 from chromosome 10 chloroplast
insertion [Oryza sativa Japonica Group]
Length = 133
Score = 119 bits (297), Expect(2) = 3e-26
Identities = 65/104 (62%), Positives = 75/104 (72%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGTTVALLFSSIHTSLISVWTTISQAQI*V 275
KLLLRRIDGAIQVR+++D+T YSLVGS + G T A LFS IHTSLISVW IS+AQ+ V
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGQSGGGTTAPLFSRIHTSLISVWRAISRAQVEV 74
Query: 274 RPQWKNRSPNNASAQTKNYEIPHFXXXXXXXXXXXXXIVPFEPF 143
PQW+N +PNNAS+QTKNYEI IVPFEPF
Sbjct: 75 HPQWENGAPNNASSQTKNYEI-------TLSFWGDGGIVPFEPF 111
Score = 26.6 bits (57), Expect(2) = 3e-26
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 137 FNAFLGSPEKATNNIISLILPS 72
F+AF G EKA N SLILPS
Sbjct: 112 FHAFPGGLEKAAINRTSLILPS 133
>ref|YP_009166652.1| hypothetical protein ycf68 (chloroplast) [Epipremnum aureum]
gi|937408483|ref|YP_009166665.1| hypothetical protein
ycf68 (chloroplast) [Epipremnum aureum]
gi|924254337|gb|ALB38630.1| hypothetical protein ycf68
(chloroplast) [Epipremnum aureum]
gi|924254350|gb|ALB38643.1| hypothetical protein ycf68
(chloroplast) [Epipremnum aureum]
Length = 114
Score = 117 bits (294), Expect(2) = 3e-26
Identities = 60/89 (67%), Positives = 68/89 (76%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+G
Sbjct: 34 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGE 93
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
I+PFE F CFSR+SGES+ Q
Sbjct: 94 IIPFEP--------FFSCFSRRSGESSNQ 114
Score = 27.3 bits (59), Expect(2) = 3e-26
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 422 SGENQFRYNLVFTRGIQTVQG 360
+GE Q R N +FTRGI+ V+G
Sbjct: 14 NGEIQRRSNFLFTRGIRAVRG 34
>ref|YP_009161600.1| hypothetical protein ycf68 (chloroplast) [Pinellia ternata]
gi|910355691|ref|YP_009161613.1| hypothetical protein
ycf68 (chloroplast) [Pinellia ternata]
gi|827505743|gb|AKJ83730.1| hypothetical protein ycf68
(chloroplast) [Pinellia ternata]
gi|827505744|gb|AKJ83731.1| hypothetical protein ycf68
(chloroplast) [Pinellia ternata]
Length = 114
Score = 119 bits (299), Expect(2) = 6e-26
Identities = 61/89 (68%), Positives = 68/89 (76%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL +HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 34 GGPPRLLSSRESIHPLSVYGQLSFEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 93
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 94 IVPFEP--------FFSCFSRRSGESSNQ 114
Score = 24.6 bits (52), Expect(2) = 6e-26
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 422 SGENQFRYNLVFTRGIQTVQG 360
+GE Q R N +FT GI+ V+G
Sbjct: 14 NGEIQCRSNFLFTCGIRAVRG 34
>dbj|BAD17339.1| rice chloroplast ORF133; ORF within trnI intron [Oryza sativa
Japonica Group]
Length = 134
Score = 117 bits (294), Expect(2) = 2e-25
Identities = 67/105 (63%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGT-TVALLFSSIHTSLISVWTTISQAQI* 278
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGGTTAPLFSRIHTSLISVWRAISRAQVE 74
Query: 277 VRPQWKNRSPNNASAQTKNYEIPHFXXXXXXXXXXXXXIVPFEPF 143
VRPQW+N +PNNAS+QTKNYEI IVPFEPF
Sbjct: 75 VRPQWENGAPNNASSQTKNYEI-------TLSFWGDGGIVPFEPF 112
Score = 25.0 bits (53), Expect(2) = 2e-25
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1
Query: 137 FNAFLGSPEKATNNIISLILPS 72
F+ F G EKA N SLILPS
Sbjct: 113 FHVFPGGLEKAAINRTSLILPS 134
>gb|AKF01342.1| hypothetical chloroplast RF68 (chloroplast) [Dictyosperma album]
Length = 120
Score = 121 bits (303), Expect = 2e-25
Identities = 62/89 (69%), Positives = 69/89 (77%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 40 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 99
Query: 183 IVPFEEGSYHSSLFKF*CFSRKSGESNKQ 97
IVPFE F CFSR+SGES+ Q
Sbjct: 100 IVPFEP--------FFSCFSRRSGESSNQ 120
Score = 63.2 bits (152), Expect = 8e-08
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = -2
Query: 469 SEFETKLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGTTVALLFSSIHTSLISVWTTIS 293
SEFETKL+LRRIDGAIQVR+N+D+T YSLVGS R G LL S +SV+ +S
Sbjct: 4 SEFETKLILRRIDGAIQVRSNVDLTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGQLS 62
>gb|AGY48999.1| hypothetical protein (chloroplast) [Oryza rufipogon]
gi|552954555|gb|AGY49023.1| hypothetical protein
(chloroplast) [Oryza rufipogon]
Length = 101
Score = 120 bits (302), Expect = 3e-25
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRGTTVALLFSSIHTSLISVWTTISQAQI*V 275
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+ V
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQVEV 74
Query: 274 RPQWKNRSPNNASAQTKNYEIPHF 203
RPQW+N +PNNAS+QTKNYEI F
Sbjct: 75 RPQWENGAPNNASSQTKNYEITPF 98
>ref|XP_003604154.1| ycf68 protein [Medicago truncatula] gi|355505209|gb|AES86351.1|
ycf68 protein [Medicago truncatula]
Length = 237
Score = 96.7 bits (239), Expect(2) = 1e-24
Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLN--GKIDHLTTHLHRPRTMRSLISFKGN 190
GGP WL SR IHPLSVYGQL L+HRFRFGLN K +HLTT+LHRPRT RS +SF G+
Sbjct: 171 GGPSWLLSSREFIHPLSVYGQLSLEHRFRFGLNRKRKTEHLTTYLHRPRTTRSPLSFWGD 230
Query: 189 GGIVPF 172
GGIVPF
Sbjct: 231 GGIVPF 236
Score = 43.1 bits (100), Expect(2) = 1e-24
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = -1
Query: 440 EDRWSDSGENQFRYNLVFTRGIQTVQG 360
EDRW DSGE Q R N +FTRGI+ VQG
Sbjct: 145 EDRWGDSGEIQCRSNFLFTRGIRAVQG 171
>ref|YP_009145038.1| hypothetical protein ycf68 (chloroplast) [Dieffenbachia seguine]
gi|827504887|gb|AKJ83473.1| hypothetical protein ycf68
(chloroplast) [Dieffenbachia seguine]
Length = 114
Score = 112 bits (279), Expect(2) = 1e-24
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = -3
Query: 363 GGPPWLSYSRVSIHPLSVYGQLFLKHRFRFGLNGKIDHLTTHLHRPRTMRSLISFKGNGG 184
GGPP L SR SIHPLSVYGQL L+HRFRFGLNGK++HLTTHLHRPRT RS +SF G+GG
Sbjct: 34 GGPPRLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEHLTTHLHRPRTTRSPLSFWGDGG 93
Query: 183 IVPFEEGSYHS 151
IVPFE +H+
Sbjct: 94 IVPFEPFFFHA 104
Score = 27.7 bits (60), Expect(2) = 1e-24
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 422 SGENQFRYNLVFTRGIQTVQG 360
+GE Q R N +FTRGI+ V+G
Sbjct: 14 NGEIQCRSNFLFTRGIRAVRG 34
>ref|YP_009180544.1| Ycf68 (chloroplast) [Stipa lipskyi]
gi|953245285|ref|YP_009180530.1| Ycf68 (chloroplast)
[Stipa lipskyi] gi|946518914|gb|ALM03019.1| Ycf68
(chloroplast) [Stipa lipskyi]
gi|946518915|gb|ALM03020.1| Ycf68 (chloroplast) [Stipa
lipskyi]
Length = 102
Score = 117 bits (292), Expect = 4e-24
Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRG-TTVALLFSSIHTSLISVWTTISQAQI* 278
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGATTAPLFSRIHTSLISVWRAISRAQVE 74
Query: 277 VRPQWKNRSPNNASAQTKNYEIPHF 203
VRPQW+N +PNNAS+QTKNYEI F
Sbjct: 75 VRPQWENGAPNNASSQTKNYEITPF 99
>ref|YP_009072974.1| hypothetical chloroplast RF68 (plastid) [Danthonia californica]
gi|694137083|ref|YP_009072987.1| hypothetical
chloroplast RF68 (plastid) [Danthonia californica]
gi|694137574|ref|YP_009073472.1| hypothetical
chloroplast RF68 (plastid) [Thysanolaena latifolia]
gi|694137587|ref|YP_009073485.1| hypothetical
chloroplast RF68 (plastid) [Thysanolaena latifolia]
gi|686985982|gb|AIQ79501.1| hypothetical chloroplast
RF68 (plastid) [Danthonia californica]
gi|686985995|gb|AIQ79514.1| hypothetical chloroplast
RF68 (plastid) [Danthonia californica]
gi|686986570|gb|AIQ80082.1| hypothetical chloroplast
RF68 (plastid) [Thysanolaena latifolia]
gi|686986583|gb|AIQ80095.1| hypothetical chloroplast
RF68 (plastid) [Thysanolaena latifolia]
gi|944258906|gb|KQL23163.1| hypothetical protein
SETIT_031609mg [Setaria italica]
Length = 102
Score = 117 bits (292), Expect = 4e-24
Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRG-TTVALLFSSIHTSLISVWTTISQAQI* 278
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGATAAPLFSRIHTSLISVWRAISRAQVE 74
Query: 277 VRPQWKNRSPNNASAQTKNYEIPHF 203
VRPQW+N +PNNAS+QTKNYEI F
Sbjct: 75 VRPQWENGAPNNASSQTKNYEITPF 99
>gb|AGP51191.1| hypothetical chloroplast RF68 (chloroplast) [Triticum monococcum
subsp. aegilopoides]
Length = 102
Score = 116 bits (291), Expect = 6e-24
Identities = 61/85 (71%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = -2
Query: 454 KLLLRRIDGAIQVRTNLDITLYSLVGSRRFRG-TTVALLFSSIHTSLISVWTTISQAQI* 278
KLLLRRIDGAIQVR+++D+T YSLVGS R G T A LFS IHTSLISVW IS+AQ+
Sbjct: 15 KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGPTTAPLFSRIHTSLISVWRAISRAQVE 74
Query: 277 VRPQWKNRSPNNASAQTKNYEIPHF 203
VRPQW+N +PNNAS+QTKNYEI F
Sbjct: 75 VRPQWENGAPNNASSQTKNYEITPF 99