BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00019947
         (907 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010916572.1| PREDICTED: general transcription factor IIH ...   254   5e-65
ref|XP_010916571.1| PREDICTED: general transcription factor IIH ...   254   5e-65
ref|XP_010916569.1| PREDICTED: general transcription factor IIH ...   254   5e-65
ref|XP_008802071.1| PREDICTED: general transcription factor IIH ...   251   5e-64
ref|XP_008802068.1| PREDICTED: general transcription factor IIH ...   251   5e-64
ref|XP_010916570.1| PREDICTED: general transcription factor IIH ...   240   9e-61
ref|XP_008802070.1| PREDICTED: general transcription factor IIH ...   237   1e-59
ref|XP_009409176.1| PREDICTED: general transcription factor IIH ...   234   9e-59
ref|XP_002284465.2| PREDICTED: general transcription factor IIH ...   231   7e-58
emb|CBI19033.3| unnamed protein product [Vitis vinifera]              231   7e-58
ref|XP_009409179.1| PREDICTED: general transcription factor IIH ...   219   2e-54
ref|XP_010999372.1| PREDICTED: general transcription factor IIH ...   217   9e-54
ref|XP_010999370.1| PREDICTED: general transcription factor IIH ...   217   9e-54
ref|XP_010999369.1| PREDICTED: general transcription factor IIH ...   217   9e-54
ref|XP_002307429.2| basal transcription factor complex subunit-r...   217   9e-54
gb|KNA24492.1| hypothetical protein SOVF_014890 [Spinacia oleracea]   216   2e-53
ref|XP_007019037.1| Basal transcription factor complex subunit-r...   216   2e-53
ref|XP_007019036.1| Basal transcription factor complex subunit-r...   216   2e-53
ref|XP_010675067.1| PREDICTED: general transcription factor IIH ...   214   6e-53
ref|XP_010273665.1| PREDICTED: general transcription factor IIH ...   214   9e-53

>ref|XP_010916572.1| PREDICTED: general transcription factor IIH subunit 3 isoform X4
           [Elaeis guineensis]
          Length = 286

 Score =  254 bits (650), Expect = 5e-65
 Identities = 142/235 (60%), Positives = 158/235 (67%), Gaps = 9/235 (3%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGG---------AATISFAKFLNHVIPFXXXXXX 534
           M  APSK               NPFFW G         AAT+ FAKFLNHVIPF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 533 XXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 354
                Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL+K+EEFV  D +++ K 
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRKVEEFVAKD-RRLGKG 117

Query: 353 KDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 174
            DRVV               LCYIQRVFRSGALHPQPRILCL GSPDGPEQYVAVMN+IF
Sbjct: 118 PDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMNAIF 177

Query: 173 SAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           SAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK Q LDGL++YLA + A  ++
Sbjct: 178 SAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQ 232


>ref|XP_010916571.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Elaeis guineensis]
          Length = 296

 Score =  254 bits (650), Expect = 5e-65
 Identities = 142/235 (60%), Positives = 158/235 (67%), Gaps = 9/235 (3%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGG---------AATISFAKFLNHVIPFXXXXXX 534
           M  APSK               NPFFW G         AAT+ FAKFLNHVIPF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 533 XXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 354
                Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL+K+EEFV  D +++ K 
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRKVEEFVAKD-RRLGKG 117

Query: 353 KDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 174
            DRVV               LCYIQRVFRSGALHPQPRILCL GSPDGPEQYVAVMN+IF
Sbjct: 118 PDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMNAIF 177

Query: 173 SAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           SAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK Q LDGL++YLA + A  ++
Sbjct: 178 SAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQ 232


>ref|XP_010916569.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Elaeis guineensis]
          Length = 305

 Score =  254 bits (650), Expect = 5e-65
 Identities = 142/235 (60%), Positives = 158/235 (67%), Gaps = 9/235 (3%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGG---------AATISFAKFLNHVIPFXXXXXX 534
           M  APSK               NPFFW G         AAT+ FAKFLNHVIPF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 533 XXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 354
                Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL+K+EEFV  D +++ K 
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRKVEEFVAKD-RRLGKG 117

Query: 353 KDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 174
            DRVV               LCYIQRVFRSGALHPQPRILCL GSPDGPEQYVAVMN+IF
Sbjct: 118 PDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMNAIF 177

Query: 173 SAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           SAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK Q LDGL++YLA + A  ++
Sbjct: 178 SAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQ 232


>ref|XP_008802071.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Phoenix dactylifera] gi|672164394|ref|XP_008802073.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X3 [Phoenix dactylifera]
          Length = 459

 Score =  251 bits (641), Expect = 5e-64
 Identities = 143/238 (60%), Positives = 159/238 (66%), Gaps = 12/238 (5%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFW-----GG-------AATISFAKFLNHVIPFXXX 543
           M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 542 XXXXXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 363
                   Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 362 VKEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 183
            K  DRVV               LCYIQRVFRSGALHPQPRILCL  SPDGPEQYVAVMN
Sbjct: 118 GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMN 177

Query: 182 SIFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           +IFSAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK QQLDGL++YLA + A  ++
Sbjct: 178 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQ 235


>ref|XP_008802068.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Phoenix dactylifera] gi|672164388|ref|XP_008802069.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X1 [Phoenix dactylifera]
          Length = 475

 Score =  251 bits (641), Expect = 5e-64
 Identities = 143/238 (60%), Positives = 159/238 (66%), Gaps = 12/238 (5%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFW-----GG-------AATISFAKFLNHVIPFXXX 543
           M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 542 XXXXXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 363
                   Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 362 VKEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 183
            K  DRVV               LCYIQRVFRSGALHPQPRILCL  SPDGPEQYVAVMN
Sbjct: 118 GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMN 177

Query: 182 SIFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           +IFSAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK QQLDGL++YLA + A  ++
Sbjct: 178 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQ 235


>ref|XP_010916570.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Elaeis guineensis]
          Length = 300

 Score =  240 bits (613), Expect = 9e-61
 Identities = 138/235 (58%), Positives = 154/235 (65%), Gaps = 9/235 (3%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGG---------AATISFAKFLNHVIPFXXXXXX 534
           M  APSK               NPFFW G         AAT+ FAKFLNHVIPF      
Sbjct: 1   MNSAPSKLYTDDVSLVVVLLDANPFFWAGGGGTSPHHPAATLPFAKFLNHVIPFLNSVLL 60

Query: 533 XXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKE 354
                Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL+K+EEFV  D +++ K 
Sbjct: 61  LNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRKVEEFVAKD-RRLGKG 117

Query: 353 KDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIF 174
            DRVV               LCYIQRVFRSGALHPQPR     GSPDGPEQYVAVMN+IF
Sbjct: 118 PDRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPR-----GSPDGPEQYVAVMNAIF 172

Query: 173 SAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           SAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK Q LDGL++YLA + A  ++
Sbjct: 173 SAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQ 227


>ref|XP_008802070.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Phoenix dactylifera]
          Length = 470

 Score =  237 bits (604), Expect = 1e-59
 Identities = 139/238 (58%), Positives = 155/238 (65%), Gaps = 12/238 (5%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFW-----GG-------AATISFAKFLNHVIPFXXX 543
           M  APSK               NPFFW     GG       AAT+ FAKFLNHVIPF   
Sbjct: 1   MNSAPSKLYSDDVSLVVVLLDTNPFFWAAGAGGGNTSPHHPAATLPFAKFLNHVIPFLNS 60

Query: 542 XXXXXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKV 363
                   Q+V+IATGVNSCGYIYDS GG  GS  G +  VCSEIL++LEEFV  D +++
Sbjct: 61  VLLLNQLNQVVLIATGVNSCGYIYDSAGG--GSHGGNVPAVCSEILRRLEEFVAKD-RRL 117

Query: 362 VKEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMN 183
            K  DRVV               LCYIQRVFRSGALHPQPR      SPDGPEQYVAVMN
Sbjct: 118 GKGPDRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPR-----ASPDGPEQYVAVMN 172

Query: 182 SIFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           +IFSAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK QQLDGL++YLA + A  ++
Sbjct: 173 AIFSAQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQ 230


>ref|XP_009409176.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Musa acuminata subsp. malaccensis]
           gi|695043004|ref|XP_009409177.1| PREDICTED: general
           transcription factor IIH subunit 3 isoform X1 [Musa
           acuminata subsp. malaccensis]
           gi|695043006|ref|XP_009409178.1| PREDICTED: general
           transcription factor IIH subunit 3 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 314

 Score =  234 bits (596), Expect = 9e-59
 Identities = 129/237 (54%), Positives = 150/237 (63%), Gaps = 14/237 (5%)
 Frame = -3

Query: 677 APSKXXXXXXXXXXXXXXVNPFFWGGAA--------------TISFAKFLNHVIPFXXXX 540
           APSK               NPFFW  +A              T+ F+K LNHVIP     
Sbjct: 6   APSKLYSDDVSLIVVLLDANPFFWASSAAAAGDSASSHHPTTTLPFSKLLNHVIPLLNSL 65

Query: 539 XXXXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVV 360
                  Q+V++ATGVNSCGYIYDS  G  GS  G +  +CSEIL++LEEFV  D  +  
Sbjct: 66  LLLNQLNQVVLVATGVNSCGYIYDSGDGGGGSACGSVPAICSEILRRLEEFVVKDRLQG- 124

Query: 359 KEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNS 180
           K  D+VV               LCYIQRVFRS A HPQPRILCL GSPDGPEQYVAVMN+
Sbjct: 125 KSPDKVVATGVSSLLSGSLSLALCYIQRVFRSRARHPQPRILCLQGSPDGPEQYVAVMNA 184

Query: 179 IFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           IFSAQRSM+ IDSCV+G QHSAFLQQASYITGGVYLK QQLDGL++YL+ + A  ++
Sbjct: 185 IFSAQRSMIPIDSCVMGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLSAVFATDLQ 241


>ref|XP_002284465.2| PREDICTED: general transcription factor IIH subunit 3 [Vitis
           vinifera]
          Length = 303

 Score =  231 bits (588), Expect = 7e-58
 Identities = 126/227 (55%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M P PSK               NPFFW   A++ F+KFL+HV+ F           Q+VV
Sbjct: 7   MAPVPSKLYSDDVSLLVVLLDTNPFFWS-TASLPFSKFLSHVLAFLNSILLINQLNQVVV 65

Query: 506 IATGVNSCGYIYDSEG--GHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IATG NSC +I+DS     +   E G+M  +CS +LQKLEEFV GD K     K+ +   
Sbjct: 66  IATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKL---SKEVLAAG 122

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                        LCYIQRVFR+G LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 123 IGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 182

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSCV+GAQHSAFLQQASYITGGVYLK QQLDGL++YL+ + A  +
Sbjct: 183 PIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDL 229


>emb|CBI19033.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  231 bits (588), Expect = 7e-58
 Identities = 126/227 (55%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M P PSK               NPFFW   A++ F+KFL+HV+ F           Q+VV
Sbjct: 1   MAPVPSKLYSDDVSLLVVLLDTNPFFWS-TASLPFSKFLSHVLAFLNSILLINQLNQVVV 59

Query: 506 IATGVNSCGYIYDSEG--GHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IATG NSC +I+DS     +   E G+M  +CS +LQKLEEFV GD K     K+ +   
Sbjct: 60  IATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKL---SKEVLAAG 116

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                        LCYIQRVFR+G LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 117 IGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 176

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSCV+GAQHSAFLQQASYITGGVYLK QQLDGL++YL+ + A  +
Sbjct: 177 PIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDL 223


>ref|XP_009409179.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 309

 Score =  219 bits (559), Expect = 2e-54
 Identities = 125/237 (52%), Positives = 146/237 (61%), Gaps = 14/237 (5%)
 Frame = -3

Query: 677 APSKXXXXXXXXXXXXXXVNPFFWGGAA--------------TISFAKFLNHVIPFXXXX 540
           APSK               NPFFW  +A              T+ F+K LNHVIP     
Sbjct: 6   APSKLYSDDVSLIVVLLDANPFFWASSAAAAGDSASSHHPTTTLPFSKLLNHVIPLLNSL 65

Query: 539 XXXXXXXQIVVIATGVNSCGYIYDSEGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVV 360
                  Q+V++ATGVNSCGYIYDS  G  GS  G +  +CSEIL++LEEFV  D  +  
Sbjct: 66  LLLNQLNQVVLVATGVNSCGYIYDSGDGGGGSACGSVPAICSEILRRLEEFVVKDRLQG- 124

Query: 359 KEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNS 180
           K  D+VV               LCYIQRVFRS A HPQPR     GSPDGPEQYVAVMN+
Sbjct: 125 KSPDKVVATGVSSLLSGSLSLALCYIQRVFRSRARHPQPR-----GSPDGPEQYVAVMNA 179

Query: 179 IFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISIK 9
           IFSAQRSM+ IDSCV+G QHSAFLQQASYITGGVYLK QQLDGL++YL+ + A  ++
Sbjct: 180 IFSAQRSMIPIDSCVMGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLSAVFATDLQ 236


>ref|XP_010999372.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Populus euphratica]
          Length = 295

 Score =  217 bits (553), Expect = 9e-54
 Identities = 118/227 (51%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M   PSK               NPFFW  ++++SF++FL+HV+ F           Q+VV
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 506 IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IA+G N+C YIYDS  +    GSE G++  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61  IASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                         CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 121 SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 177

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSC VGA +SAFLQQASYITGGVY+K Q LDGL++YL  + A  +
Sbjct: 178 PIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDL 224


>ref|XP_010999370.1| PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Populus euphratica] gi|743911031|ref|XP_010999371.1|
           PREDICTED: general transcription factor IIH subunit 3
           isoform X2 [Populus euphratica]
          Length = 298

 Score =  217 bits (553), Expect = 9e-54
 Identities = 118/227 (51%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M   PSK               NPFFW  ++++SF++FL+HV+ F           Q+VV
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 506 IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IA+G N+C YIYDS  +    GSE G++  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61  IASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                         CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 121 SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 177

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSC VGA +SAFLQQASYITGGVY+K Q LDGL++YL  + A  +
Sbjct: 178 PIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDL 224


>ref|XP_010999369.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Populus euphratica]
          Length = 411

 Score =  217 bits (553), Expect = 9e-54
 Identities = 118/227 (51%), Positives = 145/227 (63%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M   PSK               NPFFW  ++++SF++FL+HV+ F           Q+VV
Sbjct: 1   MTSVPSKLYSDDVSLLVVLLDTNPFFWTASSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 506 IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IA+G N+C YIYDS  +    GSE G++  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61  IASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                         CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 121 SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 177

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSC VGA +SAFLQQASYITGGVY+K Q LDGL++YL  + A  +
Sbjct: 178 PIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDL 224


>ref|XP_002307429.2| basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] gi|550339079|gb|EEE94425.2| basal
           transcription factor complex subunit-related family
           protein [Populus trichocarpa]
          Length = 298

 Score =  217 bits (553), Expect = 9e-54
 Identities = 119/227 (52%), Positives = 144/227 (63%), Gaps = 2/227 (0%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M   PSK               NPFFW   +++SF++FL+HV+ F           Q+VV
Sbjct: 1   MTSVPSKLYSDDVSLVVVLLDTNPFFWTPPSSLSFSQFLSHVLAFVNSILLLNQLNQVVV 60

Query: 506 IATGVNSCGYIYDS--EGGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXX 333
           IA+G N+C YIYDS  +    GSE G+M  + S +LQKLEEF+  D K   ++  R +  
Sbjct: 61  IASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQSQRAIKS 120

Query: 332 XXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMV 153
                         CYIQRVFRSG LHPQPRILCL GSPDGPEQYVAVMN+IFSAQRSMV
Sbjct: 121 SLLSGSLSMAL---CYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSAQRSMV 177

Query: 152 HIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
            IDSC VGA +SAFLQQASYITGGVY+K Q LDGL++YL  + A  +
Sbjct: 178 PIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDL 224


>gb|KNA24492.1| hypothetical protein SOVF_014890 [Spinacia oleracea]
          Length = 305

 Score =  216 bits (550), Expect = 2e-53
 Identities = 117/235 (49%), Positives = 145/235 (61%), Gaps = 10/235 (4%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFW--GGAATISFAKFLNHVIPFXXXXXXXXXXXQI 513
           M P  SK               NP+FW    ++++SF+ F++HV+ F           Q+
Sbjct: 1   MAPIASKLYTDDVSLVVLLLDTNPYFWTSSSSSSLSFSHFISHVLSFVNSILLLNQLNQV 60

Query: 512 VVIATGVNSCGYIYDSE--------GGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVVK 357
           V+IATG N+CGYIYDS           ++ S   KM   CSE+L+ LE+FV+ D      
Sbjct: 61  VIIATGHNTCGYIYDSSLSSVSSSISANESSGDAKMPAFCSEVLKSLEDFVKNDESLSSV 120

Query: 356 EKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSI 177
           +    V                CY+QRVFR+G LHPQPRILCLHGSPDGPEQYVAVMNSI
Sbjct: 121 DAGNGVGSSLLSGSLSMAL---CYVQRVFRTGPLHPQPRILCLHGSPDGPEQYVAVMNSI 177

Query: 176 FSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
           FSAQRSMV +DSCV+GAQHSAFLQQASYITGGVYLK Q LDGL++YL+ + A  +
Sbjct: 178 FSAQRSMVPVDSCVIGAQHSAFLQQASYITGGVYLKPQYLDGLFQYLSTVFATDL 232


>ref|XP_007019037.1| Basal transcription factor complex subunit-related isoform 2
           [Theobroma cacao] gi|508724365|gb|EOY16262.1| Basal
           transcription factor complex subunit-related isoform 2
           [Theobroma cacao]
          Length = 274

 Score =  216 bits (549), Expect = 2e-53
 Identities = 123/228 (53%), Positives = 147/228 (64%), Gaps = 3/228 (1%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M  APSK               NPFFW  A+++SF++FL+HV+ F           Q+VV
Sbjct: 1   MASAPSKLYADDVSLVVVLVDTNPFFWS-ASSLSFSQFLSHVLAFLNAILTLNQLNQVVV 59

Query: 506 IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGD--MKKVVKEKDRVVX 336
           IATG NSC YI+DS    +Q  E G+M V+CS +LQKLEEF+  D  + K V E      
Sbjct: 60  IATGYNSCNYIFDSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPE-----G 114

Query: 335 XXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSM 156
                         LCYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSAQRSM
Sbjct: 115 RIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSM 174

Query: 155 VHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
           V IDSC +GAQ+SAFLQQASYITGGV+ K Q LDGL++YL  + A  +
Sbjct: 175 VPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDL 222


>ref|XP_007019036.1| Basal transcription factor complex subunit-related isoform 1
           [Theobroma cacao] gi|508724364|gb|EOY16261.1| Basal
           transcription factor complex subunit-related isoform 1
           [Theobroma cacao]
          Length = 296

 Score =  216 bits (549), Expect = 2e-53
 Identities = 123/228 (53%), Positives = 147/228 (64%), Gaps = 3/228 (1%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAATISFAKFLNHVIPFXXXXXXXXXXXQIVV 507
           M  APSK               NPFFW  A+++SF++FL+HV+ F           Q+VV
Sbjct: 1   MASAPSKLYADDVSLVVVLVDTNPFFWS-ASSLSFSQFLSHVLAFLNAILTLNQLNQVVV 59

Query: 506 IATGVNSCGYIYDSEGG-HQGSEVGKMAVVCSEILQKLEEFVEGD--MKKVVKEKDRVVX 336
           IATG NSC YI+DS    +Q  E G+M V+CS +LQKLEEF+  D  + K V E      
Sbjct: 60  IATGYNSCNYIFDSSSDLNQSFENGRMPVMCSSLLQKLEEFLIKDEQLSKEVPE-----G 114

Query: 335 XXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSM 156
                         LCYIQRVFRSGALHP PRILCL GSPDGPEQYVA+MN+IFSAQRSM
Sbjct: 115 RIKSSLLSGSLSMALCYIQRVFRSGALHPHPRILCLQGSPDGPEQYVAIMNAIFSAQRSM 174

Query: 155 VHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
           V IDSC +GAQ+SAFLQQASYITGGV+ K Q LDGL++YL  + A  +
Sbjct: 175 VPIDSCYMGAQNSAFLQQASYITGGVHHKPQHLDGLFQYLMTIFATDL 222


>ref|XP_010675067.1| PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Beta vulgaris subsp. vulgaris]
           gi|870868920|gb|KMT19706.1| hypothetical protein
           BVRB_1g007610 [Beta vulgaris subsp. vulgaris]
          Length = 306

 Score =  214 bits (546), Expect = 6e-53
 Identities = 120/236 (50%), Positives = 148/236 (62%), Gaps = 11/236 (4%)
 Frame = -3

Query: 686 MIPAPSKXXXXXXXXXXXXXXVNPFFWGGAA---TISFAKFLNHVIPFXXXXXXXXXXXQ 516
           M P  SK               NP+FW  ++   ++SF+ FL+HV+ F           Q
Sbjct: 1   MAPVASKLYTDDVSLVVLLLDTNPYFWTSSSPSSSLSFSHFLSHVLSFVNSILLLNQLNQ 60

Query: 515 IVVIATGVNSCGYIYDSE--------GGHQGSEVGKMAVVCSEILQKLEEFVEGDMKKVV 360
           +V+IATG N+CGYI+DS           +Q S+   M   CS++++ LEEFV  D  + +
Sbjct: 61  VVIIATGHNTCGYIFDSSLSSVSSSISSNQSSDNATMPSFCSDVMKNLEEFVTKD--ESL 118

Query: 359 KEKDRVVXXXXXXXXXXXXXXXLCYIQRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNS 180
              D VV               LCYIQRVFRSG LHPQPRILCLHGSPDGPEQYVAVMN+
Sbjct: 119 SSVD-VVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAVMNA 177

Query: 179 IFSAQRSMVHIDSCVVGAQHSAFLQQASYITGGVYLKTQQLDGLYEYLADLPAISI 12
           IFSAQRSMV IDSCV+G QHSAFLQQASYITGGVYLK QQL+GL++YL+ + A  +
Sbjct: 178 IFSAQRSMVPIDSCVIGGQHSAFLQQASYITGGVYLKPQQLEGLFQYLSTVFATDL 233


>ref|XP_010273665.1| PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Nelumbo nucifera]
          Length = 284

 Score =  214 bits (544), Expect = 9e-53
 Identities = 116/203 (57%), Positives = 134/203 (66%), Gaps = 7/203 (3%)
 Frame = -3

Query: 620 NPFFWGGAAT----ISFAKFLNHVIPFXXXXXXXXXXXQIVVIATGVNSCGYIYDSEGGH 453
           NPF W G  T    +SF KFL HV  F           Q+VVIATG+NSC YIYDS    
Sbjct: 23  NPFLWSGENTTTNSLSFPKFLTHVFSFLNSILLLNQLNQVVVIATGLNSCDYIYDSSSSP 82

Query: 452 ---QGSEVGKMAVVCSEILQKLEEFVEGDMKKVVKEKDRVVXXXXXXXXXXXXXXXLCYI 282
              +  E G+M  +CS++LQ LEEF+  D +     KD                  LCYI
Sbjct: 83  TTVESLENGRMPALCSKLLQNLEEFLARDQEL---NKDESPPGIASSLLSGSLSLALCYI 139

Query: 281 QRVFRSGALHPQPRILCLHGSPDGPEQYVAVMNSIFSAQRSMVHIDSCVVGAQHSAFLQQ 102
           Q+VFRSG LHPQPRILCL GS DGPEQYVA+MN+IFSAQRSMV ID+CV+GAQHSAFLQQ
Sbjct: 140 QKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFSAQRSMVPIDACVIGAQHSAFLQQ 199

Query: 101 ASYITGGVYLKTQQLDGLYEYLA 33
           ASYITGGVYLK  QLDGL++YL+
Sbjct: 200 ASYITGGVYLKPPQLDGLFQYLS 222