BLASTX nr result

ID: Ophiopogon21_contig00019879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon21_contig00019879
         (1092 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KPV72325.1| hypothetical protein RHOBADRAFT_55809 [Rhodotorul...    52   6e-06

>gb|KPV72325.1| hypothetical protein RHOBADRAFT_55809 [Rhodotorula graminis WP1]
          Length = 510

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 68/224 (30%), Positives = 83/224 (37%), Gaps = 20/224 (8%)
 Frame = +1

Query: 430  PPHSGSSPP-RPLP-IWSAPPTPARCRSAPTGAQPPPLRFXXXXXXXXXXXDLDPDGLKP 603
            PP +  +PP RP P +  APPTP+R   AP   + PP              +  P G  P
Sbjct: 252  PPRAVPAPPARPSPAVPPAPPTPSRPTPAPPTRKAPPA------VPDSLLSNSSPAGSSP 305

Query: 604  GRPPAPSSTLQPSPADPVRCLSP*SRCSPWLPSRL-RRALXXXXXXXXXXXXXXXELRLS 780
              PP P     P PA P     P +  +P  PS   +RA+                   +
Sbjct: 306  PPPPPPPP---PPPAPPAPSRPPVAPPAP--PSAAPQRAVPAPPPSRVPPPPRPASPPAA 360

Query: 781  DQPVPHRQPPSSVANRPTPSPATAAISIEPPA-------SSPLLGHPGPSHGR------- 918
              P P R PP      P PSPA AA S  P A       +SP    P P  GR       
Sbjct: 361  PAPPPPRAPPPP----PGPSPAAAASSAPPRAPPPPPGRASPAAPPPPPPPGRAPPPPVG 416

Query: 919  ---RRFRSRSPAALISPGQSSLLLFPARLRPERLRHASLPSVTG 1041
                R  S + AAL   GQ+     PA   P   R    PS+ G
Sbjct: 417  MAHSRTSSTASAAL---GQAP----PAPAAPAPARAPPAPSMNG 453



 Score = 26.6 bits (57), Expect(2) = 6e-06
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +2

Query: 218 PVGR-SPAGHPLAVVARPSLEPHRPGCRTTSPARPQP*RPPL 340
           PVGR SP G P      P   P  PG R    A P P  PP+
Sbjct: 183 PVGRPSPGGGPPPPPPPPP--PPAPGSRAPPAAPPPPPPPPM 222


Top